RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 H2BFMP0C1H6 154 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 CLEC2LP0C7M8 214 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 CTSSP25774 331 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 TIMP3P35625 211 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 HTR5AP47898 357 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 ZNF83P51522 516 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 ZNF121P58317 390 aaPredicted RBP8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 TPBGQ13641 420 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 BAK1Q16611 211 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 CDONQ4KMG0 1287 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 ZMAT1Q5H9K5 638 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 FAM205BPQ63HN1 556 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 C22orf42Q6IC83 251 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 ZNF544Q6NX49 715 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 DNM1P34Q6PK57 102 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 OR8H2Q8N162 312 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 BHLHE23Q8NDY6 225 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 OR6K3Q8NGY3 331 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 RND1Q92730 232 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 BCL2L2Q92843 193 aaPredicted RBP8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 OR14A2Q96R54 314 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 OR8B4Q96RC9 309 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 OR2H1Q9GZK4 316 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 MIXL1Q9H2W2 232 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 RYDENQ9NUL5 291 aaKnown RBP8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 ZNF629Q9UEG4 869 aaPredicted RBP8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 PLEKHB1Q9UF11 243 aaPredicted RBP8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 ST6GALNAC2Q9UJ37 374 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 RGS5O15539 181 aa8.27□□□□□ -1.09
HMGCLL1-206ENST00000428842 ANXA2P07355 339 aaKnown RBP8.27□□□□□ -1.09
HMGCLL1-206ENST00000428842 IL7P13232 177 aa8.27□□□□□ -1.09
HMGCLL1-206ENST00000428842 MPGP29372 298 aa8.27□□□□□ -1.09
HMGCLL1-206ENST00000428842 IFITM2Q01629 132 aa8.27□□□□□ -1.09
HMGCLL1-206ENST00000428842 TAB1Q15750 504 aa8.27□□□□□ -1.09
HMGCLL1-206ENST00000428842 NRARPQ7Z6K4 114 aa8.27□□□□□ -1.09
HMGCLL1-206ENST00000428842 WDR31Q8NA23 367 aa8.27□□□□□ -1.09
HMGCLL1-206ENST00000428842 OR6F1Q8NGZ6 308 aa8.27□□□□□ -1.09
HMGCLL1-206ENST00000428842 OR51E1Q8TCB6 317 aa8.27□□□□□ -1.09
HMGCLL1-206ENST00000428842 RNF133Q8WVZ7 376 aa8.27□□□□□ -1.09
HMGCLL1-206ENST00000428842 ZNF486Q96H40 463 aaPredicted RBP8.27□□□□□ -1.09
HMGCLL1-206ENST00000428842 PGLYRP3Q96LB9 341 aa8.27□□□□□ -1.09
HMGCLL1-206ENST00000428842 KCNN2Q9H2S1 579 aa8.27□□□□□ -1.09
HMGCLL1-206ENST00000428842 C1orf198Q9H425 327 aa8.27□□□□□ -1.09
HMGCLL1-206ENST00000428842 DDX28Q9NUL7 540 aaKnown RBP8.27□□□□□ -1.09
HMGCLL1-206ENST00000428842 EXOSC1Q9Y3B2 195 aaKnown RBP8.27□□□□□ -1.09
HMGCLL1-206ENST00000428842 C19orf84I3L1E1 186 aa8.27□□□□□ -1.09
HMGCLL1-206ENST00000428842 AKAP8O43823 692 aaKnown RBP8.27□□□□□ -1.09
HMGCLL1-206ENST00000428842 LILRA1O75019 489 aa8.27□□□□□ -1.09
HMGCLL1-206ENST00000428842 CCNKO75909 580 aa8.27□□□□□ -1.09
HMGCLL1-206ENST00000428842 KRT8P05787 483 aa8.27□□□□□ -1.09
HMGCLL1-206ENST00000428842 CX3CR1P49238 355 aa8.27□□□□□ -1.09
HMGCLL1-206ENST00000428842 RBPJQ06330 500 aa8.27□□□□□ -1.09
HMGCLL1-206ENST00000428842 TAF13Q15543 124 aa8.27□□□□□ -1.09
HMGCLL1-206ENST00000428842 PCK2Q16822 640 aa8.27□□□□□ -1.09
HMGCLL1-206ENST00000428842 TMEM255AQ5JRV8 349 aa8.27□□□□□ -1.09
HMGCLL1-206ENST00000428842 RIPPLY2Q5TAB7 128 aa8.27□□□□□ -1.09
HMGCLL1-206ENST00000428842 ANKRD16Q6P6B7 361 aa8.27□□□□□ -1.09
HMGCLL1-206ENST00000428842 XKRXQ6PP77 449 aa8.27□□□□□ -1.09
HMGCLL1-206ENST00000428842 CD200R1LQ6Q8B3 271 aa8.27□□□□□ -1.09
HMGCLL1-206ENST00000428842 COMMD2Q86X83 199 aa8.27□□□□□ -1.09
HMGCLL1-206ENST00000428842 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.27□□□□□ -1.09
HMGCLL1-206ENST00000428842 ZNF679Q8IYX0 411 aa8.27□□□□□ -1.09
HMGCLL1-206ENST00000428842 BATF2Q8N1L9 274 aa8.27□□□□□ -1.09
HMGCLL1-206ENST00000428842 ZNF283Q8N7M2 679 aa8.27□□□□□ -1.09
HMGCLL1-206ENST00000428842 NEDD4LQ96PU5 975 aa8.27□□□□□ -1.09
HMGCLL1-206ENST00000428842 SPACA5Q96QH8 159 aa8.27□□□□□ -1.09
HMGCLL1-206ENST00000428842 ATF6BQ99941 703 aa8.27□□□□□ -1.09
HMGCLL1-206ENST00000428842 NEK6Q9HC98 313 aa8.27□□□□□ -1.09
HMGCLL1-206ENST00000428842 CCDC168Q8NDH2 2452 aa8.26□□□□□ -1.09
HMGCLL1-206ENST00000428842 RGS13O14921 159 aa8.26□□□□□ -1.09
HMGCLL1-206ENST00000428842 SYNGR3O43761 229 aa8.26□□□□□ -1.09
HMGCLL1-206ENST00000428842 MT-ND5P03915 603 aa8.26□□□□□ -1.09
HMGCLL1-206ENST00000428842 SELEP16581 610 aa8.26□□□□□ -1.09
HMGCLL1-206ENST00000428842 IL32P24001 234 aa8.26□□□□□ -1.09
HMGCLL1-206ENST00000428842 HSD11B1P28845 292 aa8.26□□□□□ -1.09
HMGCLL1-206ENST00000428842 FGF9P31371 208 aaPredicted RBP8.26□□□□□ -1.09
HMGCLL1-206ENST00000428842 NR4A2P43354 598 aa8.26□□□□□ -1.09
HMGCLL1-206ENST00000428842 ZNF133P52736 654 aaPredicted RBP8.26□□□□□ -1.09
HMGCLL1-206ENST00000428842 RPS11P62280 158 aaKnown RBP eCLIP8.26□□□□□ -1.09
HMGCLL1-206ENST00000428842 ASAH1Q13510 395 aa8.26□□□□□ -1.09
HMGCLL1-206ENST00000428842 ALKBH6Q3KRA9 238 aa8.26□□□□□ -1.09
HMGCLL1-206ENST00000428842 OR2A2Q6IF42 318 aa8.26□□□□□ -1.09
HMGCLL1-206ENST00000428842 TMEM91Q6ZNR0 172 aa8.26□□□□□ -1.09
HMGCLL1-206ENST00000428842 ACBD4Q8NC06 268 aa8.26□□□□□ -1.09
HMGCLL1-206ENST00000428842 DNAAF1Q8NEP3 725 aa8.26□□□□□ -1.09
HMGCLL1-206ENST00000428842 OR2G2Q8NGZ5 317 aa8.26□□□□□ -1.09
HMGCLL1-206ENST00000428842 NPRL2Q8WTW4 380 aa8.26□□□□□ -1.09
HMGCLL1-206ENST00000428842 FAM71F1Q96KD3 344 aaPredicted RBP8.26□□□□□ -1.09
HMGCLL1-206ENST00000428842 KCTD7Q96MP8 289 aa8.26□□□□□ -1.09
HMGCLL1-206ENST00000428842 ACTR6Q9GZN1 396 aa8.26□□□□□ -1.09
HMGCLL1-206ENST00000428842 ABCB9Q9NP78 766 aa8.26□□□□□ -1.09
HMGCLL1-206ENST00000428842 B3GAT2Q9NPZ5 323 aa8.26□□□□□ -1.09
HMGCLL1-206ENST00000428842 B3GNT2Q9NY97 397 aa8.26□□□□□ -1.09
HMGCLL1-206ENST00000428842 HCFC1P51610 2035 aa8.26□□□□□ -1.09
HMGCLL1-206ENST00000428842 A0A1W2PQ09 198 aa8.25□□□□□ -1.09
HMGCLL1-206ENST00000428842 B8ZZF3 427 aa8.25□□□□□ -1.09
HMGCLL1-206ENST00000428842 TRAPPC2P0DI81 140 aa8.25□□□□□ -1.09
HMGCLL1-206ENST00000428842 TRAPPC2BP0DI82 140 aa8.25□□□□□ -1.09
HMGCLL1-206ENST00000428842 WNT5AP41221 380 aa8.25□□□□□ -1.09
HMGCLL1-206ENST00000428842 GDI2P50395 445 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms