RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 TEX30Q5JUR7 227 aa17.45■□□□□ 0.38
HSPG2-205ENST00000427897 DCAF12L2Q5VW00 463 aa17.45■□□□□ 0.38
HSPG2-205ENST00000427897 SHFQ7M4L6 423 aa17.45■□□□□ 0.38
HSPG2-205ENST00000427897 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.45■□□□□ 0.38
HSPG2-205ENST00000427897 HS3ST5Q8IZT8 346 aa17.45■□□□□ 0.38
HSPG2-205ENST00000427897 OR4M2Q8NGB6 313 aa17.45■□□□□ 0.38
HSPG2-205ENST00000427897 OCEL1Q9H607 264 aa17.45■□□□□ 0.38
HSPG2-205ENST00000427897 SP140LQ9H930 580 aa17.45■□□□□ 0.38
HSPG2-205ENST00000427897 TANC2Q9HCD6 1990 aa17.45■□□□□ 0.38
HSPG2-205ENST00000427897 IGHV3-64DA0A0J9YX35 117 aa17.44■□□□□ 0.38
HSPG2-205ENST00000427897 F5H5P2 479 aa17.44■□□□□ 0.38
HSPG2-205ENST00000427897 TBX1O43435 398 aa17.44■□□□□ 0.38
HSPG2-205ENST00000427897 GLCEO94923 617 aa17.44■□□□□ 0.38
HSPG2-205ENST00000427897 APOC1P02654 83 aa17.44■□□□□ 0.38
HSPG2-205ENST00000427897 ANXA2P07355 339 aaKnown RBP17.44■□□□□ 0.38
HSPG2-205ENST00000427897 RPS7P62081 194 aaKnown RBP17.44■□□□□ 0.38
HSPG2-205ENST00000427897 BTG1P62324 171 aa17.44■□□□□ 0.38
HSPG2-205ENST00000427897 LCN2P80188 198 aa17.44■□□□□ 0.38
HSPG2-205ENST00000427897 OR8G1Q15617 311 aa17.44■□□□□ 0.38
HSPG2-205ENST00000427897 ATP6AP1Q15904 470 aa17.44■□□□□ 0.38
HSPG2-205ENST00000427897 PLBD1Q6P4A8 553 aa17.44■□□□□ 0.38
HSPG2-205ENST00000427897 C1orf87Q8N0U7 546 aa17.44■□□□□ 0.38
HSPG2-205ENST00000427897 OR10S1Q8NGN2 331 aa17.44■□□□□ 0.38
HSPG2-205ENST00000427897 ZNF420Q8TAQ5 688 aaPredicted RBP17.44■□□□□ 0.38
HSPG2-205ENST00000427897 TOR3AQ9H497 397 aa17.44■□□□□ 0.38
HSPG2-205ENST00000427897 METTL17Q9H7H0 456 aaPredicted RBP17.44■□□□□ 0.38
HSPG2-205ENST00000427897 GCM1Q9NP62 436 aa17.44■□□□□ 0.38
HSPG2-205ENST00000427897 DCAF16Q9NXF7 216 aa17.44■□□□□ 0.38
HSPG2-205ENST00000427897 JMJD1CQ15652 2540 aa17.43■□□□□ 0.38
HSPG2-205ENST00000427897 FOXH1O75593 365 aa17.43■□□□□ 0.38
HSPG2-205ENST00000427897 IGHV2-70P01814 119 aa17.43■□□□□ 0.38
HSPG2-205ENST00000427897 HLA-DPB1P04440 258 aa17.43■□□□□ 0.38
HSPG2-205ENST00000427897 SNAI3Q3KNW1 292 aa17.43■□□□□ 0.38
HSPG2-205ENST00000427897 DPY19L4Q7Z388 723 aa17.43■□□□□ 0.38
HSPG2-205ENST00000427897 MOGAT3Q86VF5 341 aa17.43■□□□□ 0.38
HSPG2-205ENST00000427897 THEM6Q8WUY1 208 aa17.43■□□□□ 0.38
HSPG2-205ENST00000427897 PYDC1Q8WXC3 89 aa17.43■□□□□ 0.38
HSPG2-205ENST00000427897 DNAJC9Q8WXX5 260 aa17.43■□□□□ 0.38
HSPG2-205ENST00000427897 STMN2Q93045 179 aa17.43■□□□□ 0.38
HSPG2-205ENST00000427897 NRBF2Q96F24 287 aa17.43■□□□□ 0.38
HSPG2-205ENST00000427897 SLC22A4Q9H015 551 aa17.43■□□□□ 0.38
HSPG2-205ENST00000427897 PAPOLBQ9NRJ5 636 aaKnown RBP17.43■□□□□ 0.38
HSPG2-205ENST00000427897 CD300LBA8K4G0 201 aa17.42■□□□□ 0.38
HSPG2-205ENST00000427897 TMEM178BH3BS89 294 aa17.42■□□□□ 0.38
HSPG2-205ENST00000427897 MLNRO43193 412 aa17.42■□□□□ 0.38
HSPG2-205ENST00000427897 XRCC2O43543 280 aa17.42■□□□□ 0.38
HSPG2-205ENST00000427897 H2BFMP0C1H6 154 aa17.42■□□□□ 0.38
HSPG2-205ENST00000427897 SLC2A1P11166 492 aa17.42■□□□□ 0.38
HSPG2-205ENST00000427897 CA6P23280 308 aa17.42■□□□□ 0.38
HSPG2-205ENST00000427897 CX3CR1P49238 355 aa17.42■□□□□ 0.38
HSPG2-205ENST00000427897 CDK5Q00535 292 aa17.42■□□□□ 0.38
HSPG2-205ENST00000427897 ZNF92Q03936 586 aa17.42■□□□□ 0.38
HSPG2-205ENST00000427897 PCK2Q16822 640 aa17.42■□□□□ 0.38
HSPG2-205ENST00000427897 TIGD6Q17RP2 521 aa17.42■□□□□ 0.38
HSPG2-205ENST00000427897 TMEM155Q4W5P6 130 aa17.42■□□□□ 0.38
HSPG2-205ENST00000427897 LRRC28Q86X40 367 aaPredicted RBP17.42■□□□□ 0.38
HSPG2-205ENST00000427897 MUC20Q8N307 709 aaPredicted RBP17.42■□□□□ 0.38
HSPG2-205ENST00000427897 RFLNBQ8N5W9 214 aa17.42■□□□□ 0.38
HSPG2-205ENST00000427897 OR11L1Q8NGX0 322 aa17.42■□□□□ 0.38
HSPG2-205ENST00000427897 OR2AE1Q8NHA4 323 aa17.42■□□□□ 0.38
HSPG2-205ENST00000427897 ZMYND19Q96E35 227 aaPredicted RBP17.42■□□□□ 0.38
HSPG2-205ENST00000427897 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.42■□□□□ 0.382e-6■■■■□ 23.1
HSPG2-205ENST00000427897 TCF21O43680 179 aa17.41■□□□□ 0.38
HSPG2-205ENST00000427897 CYB5R3P00387 301 aaPredicted RBP17.41■□□□□ 0.38
HSPG2-205ENST00000427897 GATA3P23771 443 aa17.41■□□□□ 0.38
HSPG2-205ENST00000427897 MDH2P40926 338 aaKnown RBP17.41■□□□□ 0.38
HSPG2-205ENST00000427897 MMP16P51512 607 aa17.41■□□□□ 0.38
HSPG2-205ENST00000427897 HNRNPA0Q13151 305 aaKnown RBP17.41■□□□□ 0.38
HSPG2-205ENST00000427897 SNAPC1Q16533 368 aa17.41■□□□□ 0.38
HSPG2-205ENST00000427897 GLYATL3Q5SZD4 288 aa17.41■□□□□ 0.38
HSPG2-205ENST00000427897 LINC01590Q5TEZ4 76 aa17.41■□□□□ 0.38
HSPG2-205ENST00000427897 TMEM236Q5W0B7 351 aa17.41■□□□□ 0.38
HSPG2-205ENST00000427897 CPOQ8IVL8 374 aa17.41■□□□□ 0.38
HSPG2-205ENST00000427897 OR5K1Q8NHB7 308 aa17.41■□□□□ 0.38
HSPG2-205ENST00000427897 SPATA3Q8NHX4 192 aa17.41■□□□□ 0.38
HSPG2-205ENST00000427897 ABHD6Q9BV23 337 aa17.41■□□□□ 0.38
HSPG2-205ENST00000427897 OPA3Q9H6K4 179 aa17.41■□□□□ 0.38
HSPG2-205ENST00000427897 PATZ1Q9HBE1 687 aaKnown RBP17.41■□□□□ 0.38
HSPG2-205ENST00000427897 BRD7Q9NPI1 651 aa17.41■□□□□ 0.38
HSPG2-205ENST00000427897 TVP23BQ9NYZ1 205 aa17.41■□□□□ 0.38
HSPG2-205ENST00000427897 DNAJC27Q9NZQ0 273 aa17.41■□□□□ 0.38
HSPG2-205ENST00000427897 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.4■□□□□ 0.38
HSPG2-205ENST00000427897 J3QLI3 93 aa17.4■□□□□ 0.38
HSPG2-205ENST00000427897 GMDSO60547 372 aa17.4■□□□□ 0.38
HSPG2-205ENST00000427897 PSKH1P11801 424 aa17.4■□□□□ 0.38
HSPG2-205ENST00000427897 OTX1P32242 354 aaPredicted RBP17.4■□□□□ 0.38
HSPG2-205ENST00000427897 RBMXP38159 391 aaKnown RBP17.4■□□□□ 0.38
HSPG2-205ENST00000427897 MZT1Q08AG7 82 aa17.4■□□□□ 0.38
HSPG2-205ENST00000427897 ZMYND11Q15326 602 aa17.4■□□□□ 0.38
HSPG2-205ENST00000427897 ESCO2Q56NI9 601 aa17.4■□□□□ 0.38
HSPG2-205ENST00000427897 CELF2-AS1Q8N7Q2 184 aa17.4■□□□□ 0.38
HSPG2-205ENST00000427897 CENPNQ96H22 339 aaPredicted RBP17.4■□□□□ 0.38
HSPG2-205ENST00000427897 ADAT1Q9BUB4 502 aaKnown RBP17.4■□□□□ 0.38
HSPG2-205ENST00000427897 REPIN1Q9BWE0 567 aaKnown RBP17.4■□□□□ 0.38
HSPG2-205ENST00000427897 PRRG3Q9BZD7 231 aa17.4■□□□□ 0.38
HSPG2-205ENST00000427897 C7orf69Q9H7B7 122 aa17.4■□□□□ 0.38
HSPG2-205ENST00000427897 ANKRD30BLA7E2S9 258 aa17.39■□□□□ 0.37
HSPG2-205ENST00000427897 ANKRD65E5RJM6 399 aa17.39■□□□□ 0.37
HSPG2-205ENST00000427897 G3V2T6 193 aa17.39■□□□□ 0.37
HSPG2-205ENST00000427897 PRODHO43272 600 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms