RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 SEC11CQ9BY50 192 aa13.14□□□□□ -0.31
PTPN13-203ENST00000427191 ARSAP15289 507 aa13.14□□□□□ -0.31
PTPN13-203ENST00000427191 LIM2P55344 173 aa13.14□□□□□ -0.31
PTPN13-203ENST00000427191 C11orf91Q3C1V1 193 aa13.14□□□□□ -0.31
PTPN13-203ENST00000427191 NECAP1Q8NC96 275 aa13.14□□□□□ -0.31
PTPN13-203ENST00000427191 DOT1LQ8TEK3 1739 aa13.14□□□□□ -0.31
PTPN13-203ENST00000427191 HRH1P35367 487 aa13.14□□□□□ -0.31
PTPN13-203ENST00000427191 EVX1P49640 407 aa13.14□□□□□ -0.31
PTPN13-203ENST00000427191 GPM6AP51674 278 aa13.14□□□□□ -0.31
PTPN13-203ENST00000427191 HERVK_113P61574 105 aa13.14□□□□□ -0.31
PTPN13-203ENST00000427191 ZBTB37Q5TC79 503 aa13.14□□□□□ -0.31
PTPN13-203ENST00000427191 PRAMEF20Q5VT98 475 aa13.14□□□□□ -0.31
PTPN13-203ENST00000427191 C19orf53Q9UNZ5 99 aaPredicted RBP13.14□□□□□ -0.31
PTPN13-203ENST00000427191 BMP5P22003 454 aa13.14□□□□□ -0.31
PTPN13-203ENST00000427191 SUMO3P55854 103 aaPredicted RBP13.14□□□□□ -0.31
PTPN13-203ENST00000427191 LCN15Q6UWW0 184 aa13.14□□□□□ -0.31
PTPN13-203ENST00000427191 LRRTM3Q86VH5 581 aa13.14□□□□□ -0.31
PTPN13-203ENST00000427191 ZDHHC22Q8N966 263 aa13.14□□□□□ -0.31
PTPN13-203ENST00000427191 TMEM229BQ8NBD8 167 aa13.14□□□□□ -0.31
PTPN13-203ENST00000427191 PLA2G12AQ9BZM1 189 aa13.14□□□□□ -0.31
PTPN13-203ENST00000427191 PRRG2O14669 202 aa13.14□□□□□ -0.31
PTPN13-203ENST00000427191 HRASP01112 189 aa13.14□□□□□ -0.31
PTPN13-203ENST00000427191 FZD2Q14332 565 aa13.14□□□□□ -0.31
PTPN13-203ENST00000427191 DUS3LQ96G46 650 aaKnown RBP13.14□□□□□ -0.31
PTPN13-203ENST00000427191 MRGPRX4Q96LA9 322 aa13.14□□□□□ -0.31
PTPN13-203ENST00000427191 FAAP24Q9BTP7 215 aa13.14□□□□□ -0.31
PTPN13-203ENST00000427191 SLC45A2Q9UMX9 530 aa13.14□□□□□ -0.31
PTPN13-203ENST00000427191 TRGV10A0A0A0MS01 117 aa13.14□□□□□ -0.31
PTPN13-203ENST00000427191 IRS1P35568 1242 aa13.14□□□□□ -0.31
PTPN13-203ENST00000427191 RAG2P55895 527 aa13.14□□□□□ -0.31
PTPN13-203ENST00000427191 ARRDC2Q8TBH0 407 aa13.14□□□□□ -0.31
PTPN13-203ENST00000427191 ST8SIA2Q92186 375 aa13.14□□□□□ -0.31
PTPN13-203ENST00000427191 TMEM230Q96A57 120 aa13.14□□□□□ -0.31
PTPN13-203ENST00000427191 CXXC1Q9P0U4 656 aaPredicted RBP13.14□□□□□ -0.31
PTPN13-203ENST00000427191 KCPQ6ZWJ8 1503 aa13.14□□□□□ -0.31
PTPN13-203ENST00000427191 GPR37O15354 613 aa13.14□□□□□ -0.31
PTPN13-203ENST00000427191 CST5P28325 142 aaPredicted RBP13.14□□□□□ -0.31
PTPN13-203ENST00000427191 FUT6P51993 359 aa13.14□□□□□ -0.31
PTPN13-203ENST00000427191 PNRC1Q12796 327 aaPredicted RBP13.14□□□□□ -0.31
PTPN13-203ENST00000427191 OXGR1Q96P68 337 aa13.14□□□□□ -0.31
PTPN13-203ENST00000427191 ZIC5Q96T25 663 aa13.14□□□□□ -0.31
PTPN13-203ENST00000427191 NIPSNAP1Q9BPW8 284 aa13.14□□□□□ -0.31
PTPN13-203ENST00000427191 PAAF1Q9BRP4 392 aa13.14□□□□□ -0.31
PTPN13-203ENST00000427191 TMED3Q9Y3Q3 217 aa13.14□□□□□ -0.31
PTPN13-203ENST00000427191 ELOA3CA0A087WX78 387 aaPredicted RBP13.13□□□□□ -0.31
PTPN13-203ENST00000427191 ZNF749O43361 778 aa13.13□□□□□ -0.31
PTPN13-203ENST00000427191 RPS16P62249 146 aaKnown RBP13.13□□□□□ -0.31
PTPN13-203ENST00000427191 RACK1P63244 317 aaKnown RBP13.13□□□□□ -0.31
PTPN13-203ENST00000427191 KHDC1LQ5JSQ8 128 aa13.13□□□□□ -0.31
PTPN13-203ENST00000427191 VN1R2Q8NFZ6 395 aa13.13□□□□□ -0.31
PTPN13-203ENST00000427191 KCNK15Q9H427 330 aa13.13□□□□□ -0.31
PTPN13-203ENST00000427191 DUS4LO95620 317 aaKnown RBP13.13□□□□□ -0.31
PTPN13-203ENST00000427191 NME1P15531 152 aaKnown RBP13.13□□□□□ -0.31
PTPN13-203ENST00000427191 GUK1Q16774 197 aa13.13□□□□□ -0.31
PTPN13-203ENST00000427191 GPR32P1Q8NGA4 272 aa13.13□□□□□ -0.31
PTPN13-203ENST00000427191 SMIM4Q8WVI0 70 aa13.13□□□□□ -0.31
PTPN13-203ENST00000427191 RAB40CQ96S21 281 aa13.13□□□□□ -0.31
PTPN13-203ENST00000427191 SLC25A4P12235 298 aa13.13□□□□□ -0.31
PTPN13-203ENST00000427191 HYAL4Q2M3T9 481 aa13.13□□□□□ -0.31
PTPN13-203ENST00000427191 OR2A2Q6IF42 318 aa13.13□□□□□ -0.31
PTPN13-203ENST00000427191 TBPL2Q6SJ96 375 aa13.13□□□□□ -0.31
PTPN13-203ENST00000427191 ZNF384Q8TF68 577 aa13.13□□□□□ -0.31
PTPN13-203ENST00000427191 GRAMD2BQ96HH9 432 aa13.13□□□□□ -0.31
PTPN13-203ENST00000427191 LINC00597Q9H2U6 94 aa13.13□□□□□ -0.31
PTPN13-203ENST00000427191 ZMAT3Q9HA38 289 aaKnown RBP13.13□□□□□ -0.31
PTPN13-203ENST00000427191 COA3Q9Y2R0 106 aaPredicted RBP13.13□□□□□ -0.31
PTPN13-203ENST00000427191 MEIKINA0A087WXM9 373 aa13.13□□□□□ -0.31
PTPN13-203ENST00000427191 WDR1O75083 606 aa13.13□□□□□ -0.31
PTPN13-203ENST00000427191 MMP11P24347 488 aa13.13□□□□□ -0.31
PTPN13-203ENST00000427191 GNG4P50150 75 aa13.13□□□□□ -0.31
PTPN13-203ENST00000427191 C9orf152Q5JTZ5 239 aa13.13□□□□□ -0.31
PTPN13-203ENST00000427191 OR4F17Q8NGA8 305 aa13.13□□□□□ -0.31
PTPN13-203ENST00000427191 CCDC74AQ96AQ1 378 aa13.13□□□□□ -0.31
PTPN13-203ENST00000427191 RNF2Q99496 336 aa13.13□□□□□ -0.31
PTPN13-203ENST00000427191 TXNIPQ9H3M7 391 aa13.13□□□□□ -0.31
PTPN13-203ENST00000427191 LANCL2Q9NS86 450 aa13.13□□□□□ -0.31
PTPN13-203ENST00000427191 LSM2Q9Y333 95 aaKnown RBP13.13□□□□□ -0.31
PTPN13-203ENST00000427191 AQP7P3A6NL99 342 aa13.13□□□□□ -0.31
PTPN13-203ENST00000427191 CST2P09228 141 aa13.13□□□□□ -0.31
PTPN13-203ENST00000427191 CD22P20273 847 aa13.13□□□□□ -0.31
PTPN13-203ENST00000427191 CD1CP29017 333 aa13.13□□□□□ -0.31
PTPN13-203ENST00000427191 PRTGQ2VWP7 1150 aa13.13□□□□□ -0.31
PTPN13-203ENST00000427191 VMA21Q3ZAQ7 101 aa13.13□□□□□ -0.31
PTPN13-203ENST00000427191 TMEM52BQ4KMG9 183 aa13.13□□□□□ -0.31
PTPN13-203ENST00000427191 ABLIM2Q6H8Q1 611 aa13.13□□□□□ -0.31
PTPN13-203ENST00000427191 GDF2Q9UK05 429 aaPredicted RBP13.13□□□□□ -0.31
PTPN13-203ENST00000427191 FIGNL2A6NMB9 653 aa13.13□□□□□ -0.31
PTPN13-203ENST00000427191 PVRP15151 417 aa13.13□□□□□ -0.31
PTPN13-203ENST00000427191 RPEL1Q2QD12 228 aa13.13□□□□□ -0.31
PTPN13-203ENST00000427191 OR4C16Q8NGL9 310 aa13.13□□□□□ -0.31
PTPN13-203ENST00000427191 WBP2Q969T9 261 aa13.13□□□□□ -0.31
PTPN13-203ENST00000427191 HDGFL3Q9Y3E1 203 aa13.13□□□□□ -0.31
PTPN13-203ENST00000427191 ZAR1LA6NP61 321 aa13.12□□□□□ -0.31
PTPN13-203ENST00000427191 BCL6P41182 706 aa13.12□□□□□ -0.31
PTPN13-203ENST00000427191 LIPNQ5VXI9 398 aa13.12□□□□□ -0.31
PTPN13-203ENST00000427191 FGF21Q9NSA1 209 aa13.12□□□□□ -0.31
PTPN13-203ENST00000427191 SH3BGRL2Q9UJC5 107 aa13.12□□□□□ -0.31
PTPN13-203ENST00000427191 NTNG1Q9Y2I2 539 aa13.12□□□□□ -0.31
PTPN13-203ENST00000427191 NXPH3O95157 252 aa13.12□□□□□ -0.31
PTPN13-203ENST00000427191 FGF2P09038 288 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms