RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 R4GN57 208 aa11.92□□□□□ -0.5
USP42-203ENST00000426246 ASPMQ8IZT6 3477 aa11.92□□□□□ -0.5
USP42-203ENST00000426246 A8MVM7 634 aa11.92□□□□□ -0.5
USP42-203ENST00000426246 ZNF254O75437 659 aa11.92□□□□□ -0.5
USP42-203ENST00000426246 IL33O95760 270 aa11.92□□□□□ -0.5
USP42-203ENST00000426246 BDKRB2P30411 391 aa11.92□□□□□ -0.5
USP42-203ENST00000426246 ADGRE4PQ86SQ3 457 aa11.92□□□□□ -0.5
USP42-203ENST00000426246 GRAMD2AQ8IUY3 354 aa11.92□□□□□ -0.5
USP42-203ENST00000426246 PGAM5Q96HS1 289 aa11.92□□□□□ -0.5
USP42-203ENST00000426246 PHB2Q99623 299 aa11.92□□□□□ -0.5
USP42-203ENST00000426246 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.92□□□□□ -0.5
USP42-203ENST00000426246 VSIG4Q9Y279 399 aa11.92□□□□□ -0.5
USP42-203ENST00000426246 CLDN16Q9Y5I7 305 aa11.92□□□□□ -0.5
USP42-203ENST00000426246 GSTZ1O43708 216 aaPredicted RBP11.92□□□□□ -0.5
USP42-203ENST00000426246 OR2J2O76002 312 aa11.92□□□□□ -0.5
USP42-203ENST00000426246 CFIP05156 583 aa11.92□□□□□ -0.5
USP42-203ENST00000426246 OR3A4PP47883 348 aa11.92□□□□□ -0.5
USP42-203ENST00000426246 TAGLNQ01995 201 aaKnown RBP11.92□□□□□ -0.5
USP42-203ENST00000426246 ZNF616Q08AN1 781 aa11.92□□□□□ -0.5
USP42-203ENST00000426246 FUT7Q11130 342 aa11.92□□□□□ -0.5
USP42-203ENST00000426246 PLXDC2Q6UX71 529 aa11.92□□□□□ -0.5
USP42-203ENST00000426246 OR5T2Q8NGG2 359 aa11.92□□□□□ -0.5
USP42-203ENST00000426246 EHFQ9NZC4 300 aa11.92□□□□□ -0.5
USP42-203ENST00000426246 KCNMB2Q9Y691 235 aa11.92□□□□□ -0.5
USP42-203ENST00000426246 A0A1B0GW55 424 aa11.91□□□□□ -0.5
USP42-203ENST00000426246 NUDT21O43809 227 aaKnown RBP11.91□□□□□ -0.5
USP42-203ENST00000426246 RAMP1O60894 148 aa11.91□□□□□ -0.5
USP42-203ENST00000426246 DUX4L2P0CJ85 424 aa11.91□□□□□ -0.5
USP42-203ENST00000426246 DUX4L3P0CJ86 424 aa11.91□□□□□ -0.5
USP42-203ENST00000426246 DUX4L4P0CJ87 422 aa11.91□□□□□ -0.5
USP42-203ENST00000426246 DUX4L5P0CJ88 424 aa11.91□□□□□ -0.5
USP42-203ENST00000426246 DUX4L6P0CJ89 424 aa11.91□□□□□ -0.5
USP42-203ENST00000426246 DUX4L7P0CJ90 424 aa11.91□□□□□ -0.5
USP42-203ENST00000426246 TMEM225BP0DP42 221 aa11.91□□□□□ -0.5
USP42-203ENST00000426246 PNLIPP16233 465 aa11.91□□□□□ -0.5
USP42-203ENST00000426246 POLR2HP52434 150 aaKnown RBP11.91□□□□□ -0.5
USP42-203ENST00000426246 HSF1Q00613 529 aa11.91□□□□□ -0.5
USP42-203ENST00000426246 PMS2CLQ68D20 193 aa11.91□□□□□ -0.5
USP42-203ENST00000426246 WDR5BQ86VZ2 330 aa11.91□□□□□ -0.5
USP42-203ENST00000426246 POLE3Q9NRF9 147 aa11.91□□□□□ -0.5
USP42-203ENST00000426246 DUX4Q9UBX2 424 aa11.91□□□□□ -0.5
USP42-203ENST00000426246 GPN3Q9UHW5 284 aaPredicted RBP11.91□□□□□ -0.5
USP42-203ENST00000426246 PCDHB10Q9UN67 800 aa11.91□□□□□ -0.5
USP42-203ENST00000426246 ADAMTS9Q9P2N4 1935 aa11.91□□□□□ -0.5
USP42-203ENST00000426246 PRH1P02810 166 aa11.91□□□□□ -0.5
USP42-203ENST00000426246 CELA2AP08217 269 aa11.91□□□□□ -0.5
USP42-203ENST00000426246 ZNF43P17038 809 aa11.91□□□□□ -0.5
USP42-203ENST00000426246 NAT1P18440 290 aa11.91□□□□□ -0.5
USP42-203ENST00000426246 GPR85P60893 370 aa11.91□□□□□ -0.5
USP42-203ENST00000426246 PDSS1Q5T2R2 415 aa11.91□□□□□ -0.5
USP42-203ENST00000426246 UNQ9370/PRO34162Q6UXP9 181 aa11.91□□□□□ -0.5
USP42-203ENST00000426246 WDFY1Q8IWB7 410 aa11.91□□□□□ -0.5
USP42-203ENST00000426246 CDH26Q8IXH8 852 aa11.91□□□□□ -0.5
USP42-203ENST00000426246 FAM71CQ8NEG0 241 aa11.91□□□□□ -0.5
USP42-203ENST00000426246 FOXRED1Q96CU9 486 aaPredicted RBP11.91□□□□□ -0.5
USP42-203ENST00000426246 FBXO17Q96EF6 278 aa11.91□□□□□ -0.5
USP42-203ENST00000426246 NMNAT2Q9BZQ4 307 aa11.91□□□□□ -0.5
USP42-203ENST00000426246 SDHAF3Q9NRP4 125 aa11.91□□□□□ -0.5
USP42-203ENST00000426246 ETV7Q9Y603 341 aa11.91□□□□□ -0.5
USP42-203ENST00000426246 TLCD2A6NGC4 264 aa11.91□□□□□ -0.5
USP42-203ENST00000426246 STMND1H3BQB6 276 aa11.91□□□□□ -0.5
USP42-203ENST00000426246 GLRA1P23415 457 aa11.91□□□□□ -0.5
USP42-203ENST00000426246 CRABP1P29762 137 aa11.91□□□□□ -0.5
USP42-203ENST00000426246 BLVRBP30043 206 aaPredicted RBP11.91□□□□□ -0.5
USP42-203ENST00000426246 NHLRC3Q5JS37 347 aa11.91□□□□□ -0.5
USP42-203ENST00000426246 OR2W3Q7Z3T1 314 aa11.91□□□□□ -0.5
USP42-203ENST00000426246 OR10G3Q8NGC4 313 aa11.91□□□□□ -0.5
USP42-203ENST00000426246 NUBPLQ8TB37 319 aa11.91□□□□□ -0.5
USP42-203ENST00000426246 NEK7Q8TDX7 302 aa11.91□□□□□ -0.5
USP42-203ENST00000426246 DYRK2Q92630 601 aa11.91□□□□□ -0.5
USP42-203ENST00000426246 PNPLA2Q96AD5 504 aa11.91□□□□□ -0.5
USP42-203ENST00000426246 CRB3Q9BUF7 120 aa11.91□□□□□ -0.5
USP42-203ENST00000426246 TXNIPQ9H3M7 391 aa11.91□□□□□ -0.5
USP42-203ENST00000426246 SLC22A11Q9NSA0 550 aa11.91□□□□□ -0.5
USP42-203ENST00000426246 PILRBQ9UKJ0 227 aa11.91□□□□□ -0.5
USP42-203ENST00000426246 MRPS28Q9Y2Q9 187 aaKnown RBP11.91□□□□□ -0.5
USP42-203ENST00000426246 IGHV1OR21-1A0A087WYE8 117 aa11.9□□□□□ -0.5
USP42-203ENST00000426246 TRAPPC6AO75865 159 aa11.9□□□□□ -0.5
USP42-203ENST00000426246 RD3LP0DJH9 198 aa11.9□□□□□ -0.5
USP42-203ENST00000426246 RAB3AP20336 220 aa11.9□□□□□ -0.5
USP42-203ENST00000426246 CSF2RBP32927 897 aa11.9□□□□□ -0.5
USP42-203ENST00000426246 RFC3P40938 356 aa11.9□□□□□ -0.5
USP42-203ENST00000426246 CLDN17P56750 224 aa11.9□□□□□ -0.5
USP42-203ENST00000426246 HSD11B2P80365 405 aa11.9□□□□□ -0.5
USP42-203ENST00000426246 MRPS10P82664 201 aaKnown RBP11.9□□□□□ -0.5
USP42-203ENST00000426246 STK11Q15831 433 aa11.9□□□□□ -0.5
USP42-203ENST00000426246 SLC51BQ86UW2 128 aa11.9□□□□□ -0.5
USP42-203ENST00000426246 SUMF1Q8NBK3 374 aa11.9□□□□□ -0.5
USP42-203ENST00000426246 CLEC1AQ8NC01 280 aa11.9□□□□□ -0.5
USP42-203ENST00000426246 RAB3CQ96E17 227 aa11.9□□□□□ -0.5
USP42-203ENST00000426246 GNRHR2Q96P88 292 aa11.9□□□□□ -0.5
USP42-203ENST00000426246 GPHA2Q96T91 129 aa11.9□□□□□ -0.5
USP42-203ENST00000426246 SEMA5BQ9P283 1151 aa11.9□□□□□ -0.5
USP42-203ENST00000426246 LY6G6EA0A0G2JKS1 128 aa11.9□□□□□ -0.5
USP42-203ENST00000426246 H7C2Y5 167 aa11.9□□□□□ -0.5
USP42-203ENST00000426246 SULT1B1O43704 296 aa11.9□□□□□ -0.5
USP42-203ENST00000426246 OMGP23515 440 aa11.9□□□□□ -0.5
USP42-203ENST00000426246 TSPO2Q5TGU0 170 aa11.9□□□□□ -0.5
USP42-203ENST00000426246 OR2AE1Q8NHA4 323 aa11.9□□□□□ -0.5
USP42-203ENST00000426246 HDHD3Q9BSH5 251 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms