RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 DEAF1O75398 565 aaPredicted RBP10.71□□□□□ -0.69
SGCE-203ENST00000425444 PAICSP22234 425 aaKnown RBP10.71□□□□□ -0.69
SGCE-203ENST00000425444 GRK5P34947 590 aa10.71□□□□□ -0.69
SGCE-203ENST00000425444 RAD23AP54725 363 aa10.71□□□□□ -0.69
SGCE-203ENST00000425444 GK2Q14410 553 aaPredicted RBP10.71□□□□□ -0.69
SGCE-203ENST00000425444 RSPO1Q2MKA7 263 aaPredicted RBP10.71□□□□□ -0.69
SGCE-203ENST00000425444 ZNF362Q5T0B9 420 aaPredicted RBP10.71□□□□□ -0.69
SGCE-203ENST00000425444 DRAM2Q6UX65 266 aa10.71□□□□□ -0.69
SGCE-203ENST00000425444 COLCA1Q6ZS62 124 aa10.71□□□□□ -0.69
SGCE-203ENST00000425444 SPATC1Q76KD6 591 aa10.71□□□□□ -0.69
SGCE-203ENST00000425444 TMEM179BQ7Z7N9 219 aa10.71□□□□□ -0.69
SGCE-203ENST00000425444 NAA40Q86UY6 237 aa10.71□□□□□ -0.69
SGCE-203ENST00000425444 ERI1Q8IV48 349 aaKnown RBP10.71□□□□□ -0.69
SGCE-203ENST00000425444 KLHL36Q8N4N3 616 aa10.71□□□□□ -0.69
SGCE-203ENST00000425444 SPICQ8N5J4 248 aa10.71□□□□□ -0.69
SGCE-203ENST00000425444 OR4M2Q8NGB6 313 aa10.71□□□□□ -0.69
SGCE-203ENST00000425444 OR10S1Q8NGN2 331 aa10.71□□□□□ -0.69
SGCE-203ENST00000425444 OR6N2Q8NGY6 317 aa10.71□□□□□ -0.69
SGCE-203ENST00000425444 SPRYD4Q8WW59 207 aaPredicted RBP10.71□□□□□ -0.69
SGCE-203ENST00000425444 SLAMF6Q96DU3 332 aa10.71□□□□□ -0.69
SGCE-203ENST00000425444 MEGF10Q96KG7 1140 aa10.71□□□□□ -0.69
SGCE-203ENST00000425444 NMNAT2Q9BZQ4 307 aa10.71□□□□□ -0.69
SGCE-203ENST00000425444 MED20Q9H944 212 aa10.71□□□□□ -0.69
SGCE-203ENST00000425444 DDX28Q9NUL7 540 aaKnown RBP10.71□□□□□ -0.69
SGCE-203ENST00000425444 TMEM100Q9NV29 134 aa10.71□□□□□ -0.69
SGCE-203ENST00000425444 TENM3Q9P273 2699 aa10.71□□□□□ -0.69
SGCE-203ENST00000425444 POMPQ9Y244 141 aa10.71□□□□□ -0.69
SGCE-203ENST00000425444 N6AMT1Q9Y5N5 214 aa10.71□□□□□ -0.69
SGCE-203ENST00000425444 TANC2Q9HCD6 1990 aa10.7□□□□□ -0.7
SGCE-203ENST00000425444 IGHV3-64DA0A0J9YX35 117 aa10.7□□□□□ -0.7
SGCE-203ENST00000425444 ZNF878C9JN71 531 aa10.7□□□□□ -0.7
SGCE-203ENST00000425444 F5H5P2 479 aa10.7□□□□□ -0.7
SGCE-203ENST00000425444 H0YL77 283 aa10.7□□□□□ -0.7
SGCE-203ENST00000425444 ZNF593O00488 134 aaPredicted RBP10.7□□□□□ -0.7
SGCE-203ENST00000425444 MLNRO43193 412 aa10.7□□□□□ -0.7
SGCE-203ENST00000425444 IGHV2-70P01814 119 aa10.7□□□□□ -0.7
SGCE-203ENST00000425444 HLA-DPB1P04440 258 aa10.7□□□□□ -0.7
SGCE-203ENST00000425444 PSKH1P11801 424 aa10.7□□□□□ -0.7
SGCE-203ENST00000425444 EPHA1P21709 976 aa10.7□□□□□ -0.7
SGCE-203ENST00000425444 ZFP36P26651 326 aaKnown RBP10.7□□□□□ -0.7
SGCE-203ENST00000425444 HSD11B1P28845 292 aa10.7□□□□□ -0.7
SGCE-203ENST00000425444 MMP16P51512 607 aa10.7□□□□□ -0.7
SGCE-203ENST00000425444 PRKXP51817 358 aa10.7□□□□□ -0.7
SGCE-203ENST00000425444 BTG1P62324 171 aa10.7□□□□□ -0.7
SGCE-203ENST00000425444 LCN2P80188 198 aa10.7□□□□□ -0.7
SGCE-203ENST00000425444 EIF2B1Q14232 305 aaKnown RBP10.7□□□□□ -0.7
SGCE-203ENST00000425444 SNAI3Q3KNW1 292 aa10.7□□□□□ -0.7
SGCE-203ENST00000425444 DCAF12L2Q5VW00 463 aa10.7□□□□□ -0.7
SGCE-203ENST00000425444 HS3ST5Q8IZT8 346 aa10.7□□□□□ -0.7
SGCE-203ENST00000425444 OR2AE1Q8NHA4 323 aa10.7□□□□□ -0.7
SGCE-203ENST00000425444 ZNF420Q8TAQ5 688 aaPredicted RBP10.7□□□□□ -0.7
SGCE-203ENST00000425444 INTS14Q96SY0 518 aa10.7□□□□□ -0.7
SGCE-203ENST00000425444 KCNJ15Q99712 375 aa10.7□□□□□ -0.7
SGCE-203ENST00000425444 SLC30A2Q9BRI3 323 aa10.7□□□□□ -0.7
SGCE-203ENST00000425444 TEX12Q9BXU0 123 aa10.7□□□□□ -0.7
SGCE-203ENST00000425444 OR51V1Q9H2C8 321 aa10.7□□□□□ -0.7
SGCE-203ENST00000425444 GCM1Q9NP62 436 aa10.7□□□□□ -0.7
SGCE-203ENST00000425444 DNAJB9Q9UBS3 223 aa10.7□□□□□ -0.7
SGCE-203ENST00000425444 TCRBV3S1A0A5B6 114 aa10.69□□□□□ -0.7
SGCE-203ENST00000425444 GGT3PA6NGU5 568 aa10.69□□□□□ -0.7
SGCE-203ENST00000425444 LRRC30A6NM36 301 aa10.69□□□□□ -0.7
SGCE-203ENST00000425444 PRR23D1E9PI22 279 aaPredicted RBP10.69□□□□□ -0.7
SGCE-203ENST00000425444 IFNL4K9M1U5 179 aa10.69□□□□□ -0.7
SGCE-203ENST00000425444 GSC2O15499 205 aa10.69□□□□□ -0.7
SGCE-203ENST00000425444 CYB5R3P00387 301 aaPredicted RBP10.69□□□□□ -0.7
SGCE-203ENST00000425444 ANXA2P07355 339 aaKnown RBP10.69□□□□□ -0.7
SGCE-203ENST00000425444 PRR23D2P0DMB1 279 aaPredicted RBP10.69□□□□□ -0.7
SGCE-203ENST00000425444 SLC2A1P11166 492 aa10.69□□□□□ -0.7
SGCE-203ENST00000425444 OSMP13725 252 aa10.69□□□□□ -0.7
SGCE-203ENST00000425444 ANXA8P13928 327 aa10.69□□□□□ -0.7
SGCE-203ENST00000425444 IRF2P14316 349 aa10.69□□□□□ -0.7
SGCE-203ENST00000425444 GSTT1P30711 240 aa10.69□□□□□ -0.7
SGCE-203ENST00000425444 RBMXP38159 391 aaKnown RBP10.69□□□□□ -0.7
SGCE-203ENST00000425444 MDH2P40926 338 aaKnown RBP10.69□□□□□ -0.7
SGCE-203ENST00000425444 SLC15A1P46059 708 aa10.69□□□□□ -0.7
SGCE-203ENST00000425444 RASSF2P50749 326 aa10.69□□□□□ -0.7
SGCE-203ENST00000425444 GRB2P62993 217 aaKnown RBP10.69□□□□□ -0.7
SGCE-203ENST00000425444 GINS1Q14691 196 aa10.69□□□□□ -0.7
SGCE-203ENST00000425444 OR8G1Q15617 311 aa10.69□□□□□ -0.7
SGCE-203ENST00000425444 TMEM155Q4W5P6 130 aa10.69□□□□□ -0.7
SGCE-203ENST00000425444 TEX30Q5JUR7 227 aa10.69□□□□□ -0.7
SGCE-203ENST00000425444 PLBD1Q6P4A8 553 aa10.69□□□□□ -0.7
SGCE-203ENST00000425444 DPY19L4Q7Z388 723 aa10.69□□□□□ -0.7
SGCE-203ENST00000425444 MOGAT3Q86VF5 341 aa10.69□□□□□ -0.7
SGCE-203ENST00000425444 TEX29Q8N6K0 151 aa10.69□□□□□ -0.7
SGCE-203ENST00000425444 PLEKHA8Q96JA3 519 aa10.69□□□□□ -0.7
SGCE-203ENST00000425444 SUCNR1Q9BXA5 334 aa10.69□□□□□ -0.7
SGCE-203ENST00000425444 CADM1Q9BY67 442 aaKnown RBP10.69□□□□□ -0.7
SGCE-203ENST00000425444 G6PC2Q9NQR9 355 aa10.69□□□□□ -0.7
SGCE-203ENST00000425444 NOP16Q9Y3C1 178 aaKnown RBP10.69□□□□□ -0.7
SGCE-203ENST00000425444 LOC105371242A0A075B767 164 aa10.68□□□□□ -0.7
SGCE-203ENST00000425444 TMEM178BH3BS89 294 aa10.68□□□□□ -0.7
SGCE-203ENST00000425444 TBX1O43435 398 aa10.68□□□□□ -0.7
SGCE-203ENST00000425444 FOXH1O75593 365 aa10.68□□□□□ -0.7
SGCE-203ENST00000425444 TIPRLO75663 272 aa10.68□□□□□ -0.7
SGCE-203ENST00000425444 GLCEO94923 617 aa10.68□□□□□ -0.7
SGCE-203ENST00000425444 HMGN1P05114 100 aa10.68□□□□□ -0.7
SGCE-203ENST00000425444 PRKACGP22612 351 aa10.68□□□□□ -0.7
SGCE-203ENST00000425444 OTX1P32242 354 aaPredicted RBP10.68□□□□□ -0.7
SGCE-203ENST00000425444 CX3CR1P49238 355 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms