RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 PTP4A3O75365 173 aa12.78□□□□□ -0.36
RPUSD3-204ENST00000424438 FCN3O75636 299 aa12.78□□□□□ -0.36
RPUSD3-204ENST00000424438 PPP1R3DO95685 299 aa12.78□□□□□ -0.36
RPUSD3-204ENST00000424438 GABRA5P31644 462 aa12.78□□□□□ -0.36
RPUSD3-204ENST00000424438 KIR2DS4P43632 304 aa12.78□□□□□ -0.36
RPUSD3-204ENST00000424438 RABL3Q5HYI8 236 aa12.78□□□□□ -0.36
RPUSD3-204ENST00000424438 METTL21CQ5VZV1 264 aa12.78□□□□□ -0.36
RPUSD3-204ENST00000424438 C1orf122Q6ZSJ8 110 aa12.78□□□□□ -0.36
RPUSD3-204ENST00000424438 PGAP1Q75T13 922 aa12.78□□□□□ -0.36
RPUSD3-204ENST00000424438 FAM90A1Q86YD7 464 aa12.78□□□□□ -0.36
RPUSD3-204ENST00000424438 CMTM4Q8IZR5 234 aa12.78□□□□□ -0.36
RPUSD3-204ENST00000424438 GCSAMQ8N6F7 178 aa12.78□□□□□ -0.36
RPUSD3-204ENST00000424438 C19orf18Q8NEA5 215 aa12.78□□□□□ -0.36
RPUSD3-204ENST00000424438 SPRYD4Q8WW59 207 aaPredicted RBP12.78□□□□□ -0.36
RPUSD3-204ENST00000424438 NUAK2Q9H093 628 aa12.78□□□□□ -0.36
RPUSD3-204ENST00000424438 RANBP3Q9H6Z4 567 aaPredicted RBP12.78□□□□□ -0.36
RPUSD3-204ENST00000424438 MRPL15Q9P015 296 aaKnown RBP12.78□□□□□ -0.36
RPUSD3-204ENST00000424438 AURKCQ9UQB9 309 aa12.78□□□□□ -0.36
RPUSD3-204ENST00000424438 SIGLEC7Q9Y286 467 aa12.78□□□□□ -0.36
RPUSD3-204ENST00000424438 CD300LBA8K4G0 201 aa12.77□□□□□ -0.37
RPUSD3-204ENST00000424438 FAM220BPB1ANY3 271 aa12.77□□□□□ -0.37
RPUSD3-204ENST00000424438 FFAR1O14842 300 aa12.77□□□□□ -0.37
RPUSD3-204ENST00000424438 OR10H3O60404 316 aa12.77□□□□□ -0.37
RPUSD3-204ENST00000424438 IFNW1P05000 195 aa12.77□□□□□ -0.37
RPUSD3-204ENST00000424438 MUC1P15941 1255 aaPredicted RBP12.77□□□□□ -0.37
RPUSD3-204ENST00000424438 EEF1B2P24534 225 aaKnown RBP12.77□□□□□ -0.37
RPUSD3-204ENST00000424438 ACSM1Q08AH1 577 aa12.77□□□□□ -0.37
RPUSD3-204ENST00000424438 OR8B8Q15620 311 aa12.77□□□□□ -0.37
RPUSD3-204ENST00000424438 SFRP4Q6FHJ7 346 aaPredicted RBP12.77□□□□□ -0.37
RPUSD3-204ENST00000424438 SLC35E4Q6ICL7 350 aa12.77□□□□□ -0.37
RPUSD3-204ENST00000424438 ZNF730Q6ZMV8 503 aa12.77□□□□□ -0.37
RPUSD3-204ENST00000424438 C8orf46Q8TAG6 207 aa12.77□□□□□ -0.37
RPUSD3-204ENST00000424438 ATF6BQ99941 703 aa12.77□□□□□ -0.37
RPUSD3-204ENST00000424438 SIKE1Q9BRV8 207 aa12.77□□□□□ -0.37
RPUSD3-204ENST00000424438 WDR76Q9H967 626 aa12.77□□□□□ -0.37
RPUSD3-204ENST00000424438 RNPEPL1Q9HAU8 725 aa12.77□□□□□ -0.37
RPUSD3-204ENST00000424438 NECAP2Q9NVZ3 263 aa12.77□□□□□ -0.37
RPUSD3-204ENST00000424438 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.77□□□□□ -0.37
RPUSD3-204ENST00000424438 V9GYY5 206 aaPredicted RBP12.77□□□□□ -0.37
RPUSD3-204ENST00000424438 DNAH3Q8TD57 4116 aa12.76□□□□□ -0.37
RPUSD3-204ENST00000424438 IGLV1-36A0A0B4J1U3 117 aa12.76□□□□□ -0.37
RPUSD3-204ENST00000424438 NPFFO15130 113 aa12.76□□□□□ -0.37
RPUSD3-204ENST00000424438 MDH1P40925 334 aaKnown RBP12.76□□□□□ -0.37
RPUSD3-204ENST00000424438 GPR4P46093 362 aa12.76□□□□□ -0.37
RPUSD3-204ENST00000424438 AANATQ16613 207 aa12.76□□□□□ -0.37
RPUSD3-204ENST00000424438 SLC36A3Q495N2 470 aa12.76□□□□□ -0.37
RPUSD3-204ENST00000424438 LRRC23Q53EV4 343 aaPredicted RBP12.76□□□□□ -0.37
RPUSD3-204ENST00000424438 SLC18B1Q6NT16 456 aa12.76□□□□□ -0.37
RPUSD3-204ENST00000424438 DPY19L2P2Q6ZN68 376 aa12.76□□□□□ -0.37
RPUSD3-204ENST00000424438 PTCHD4Q6ZW05 846 aa12.76□□□□□ -0.37
RPUSD3-204ENST00000424438 MRPL21Q7Z2W9 205 aaKnown RBP12.76□□□□□ -0.37
RPUSD3-204ENST00000424438 SLC26A10Q8NG04 563 aa12.76□□□□□ -0.37
RPUSD3-204ENST00000424438 C12orf43Q96C57 262 aaKnown RBP12.76□□□□□ -0.37
RPUSD3-204ENST00000424438 ADAT1Q9BUB4 502 aaKnown RBP12.76□□□□□ -0.37
RPUSD3-204ENST00000424438 OPA3Q9H6K4 179 aa12.76□□□□□ -0.37
RPUSD3-204ENST00000424438 KCNG2Q9UJ96 466 aa12.76□□□□□ -0.37
RPUSD3-204ENST00000424438 RPS6KA6Q9UK32 745 aa12.76□□□□□ -0.37
RPUSD3-204ENST00000424438 PRPF19Q9UMS4 504 aaKnown RBP12.76□□□□□ -0.37
RPUSD3-204ENST00000424438 COL7A1Q02388 2944 aa12.75□□□□□ -0.37
RPUSD3-204ENST00000424438 ANKRD61A6NGH8 418 aa12.75□□□□□ -0.37
RPUSD3-204ENST00000424438 BBIP1A8MTZ0 92 aa12.75□□□□□ -0.37
RPUSD3-204ENST00000424438 IMPA2O14732 288 aa12.75□□□□□ -0.37
RPUSD3-204ENST00000424438 GYPAP02724 150 aa12.75□□□□□ -0.37
RPUSD3-204ENST00000424438 LCATP04180 440 aa12.75□□□□□ -0.37
RPUSD3-204ENST00000424438 CA6P23280 308 aa12.75□□□□□ -0.37
RPUSD3-204ENST00000424438 OTX1P32242 354 aaPredicted RBP12.75□□□□□ -0.37
RPUSD3-204ENST00000424438 RPS6KA3P51812 740 aa12.75□□□□□ -0.37
RPUSD3-204ENST00000424438 TPTEP56180 551 aa12.75□□□□□ -0.37
RPUSD3-204ENST00000424438 TRAP1Q12931 704 aaKnown RBP12.75□□□□□ -0.37
RPUSD3-204ENST00000424438 AGBL2Q5U5Z8 902 aa12.75□□□□□ -0.37
RPUSD3-204ENST00000424438 TSEN54Q7Z6J9 526 aaKnown RBP12.75□□□□□ -0.37
RPUSD3-204ENST00000424438 BEND2Q8NDZ0 799 aa12.75□□□□□ -0.37
RPUSD3-204ENST00000424438 SGCDQ92629 289 aa12.75□□□□□ -0.37
RPUSD3-204ENST00000424438 TNFRSF14Q92956 283 aa12.75□□□□□ -0.37
RPUSD3-204ENST00000424438 SLCO4A1Q96BD0 722 aa12.75□□□□□ -0.37
RPUSD3-204ENST00000424438 TPD52L3Q96J77 140 aa12.75□□□□□ -0.37
RPUSD3-204ENST00000424438 RAB18Q9NP72 206 aa12.75□□□□□ -0.37
RPUSD3-204ENST00000424438 PNRC2Q9NPJ4 139 aaKnown RBP12.75□□□□□ -0.37
RPUSD3-204ENST00000424438 C14orf119Q9NWQ9 140 aa12.75□□□□□ -0.37
RPUSD3-204ENST00000424438 CYB5R1Q9UHQ9 305 aa12.75□□□□□ -0.37
RPUSD3-204ENST00000424438 AP3M1Q9Y2T2 418 aa12.75□□□□□ -0.37
RPUSD3-204ENST00000424438 MAB21L2Q9Y586 359 aa12.75□□□□□ -0.37
RPUSD3-204ENST00000424438 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.74□□□□□ -0.37
RPUSD3-204ENST00000424438 DCTN6O00399 190 aa12.74□□□□□ -0.37
RPUSD3-204ENST00000424438 CDKN2AP42771 156 aaKnown RBP12.74□□□□□ -0.37
RPUSD3-204ENST00000424438 UBE2E1P51965 193 aa12.74□□□□□ -0.37
RPUSD3-204ENST00000424438 MICBQ29980 383 aa12.74□□□□□ -0.37
RPUSD3-204ENST00000424438 ATPAF1Q5TC12 328 aaPredicted RBP12.74□□□□□ -0.37
RPUSD3-204ENST00000424438 OTPQ5XKR4 325 aa12.74□□□□□ -0.37
RPUSD3-204ENST00000424438 NCR3LG1Q68D85 454 aa12.74□□□□□ -0.37
RPUSD3-204ENST00000424438 CFAP77Q6ZQR2 320 aa12.74□□□□□ -0.37
RPUSD3-204ENST00000424438 RRM2BQ7LG56 351 aa12.74□□□□□ -0.37
RPUSD3-204ENST00000424438 SLC36A1Q7Z2H8 476 aa12.74□□□□□ -0.37
RPUSD3-204ENST00000424438 OR2T12Q8NG77 320 aa12.74□□□□□ -0.37
RPUSD3-204ENST00000424438 OR4S1Q8NGB4 309 aa12.74□□□□□ -0.37
RPUSD3-204ENST00000424438 PITX2Q99697 317 aa12.74□□□□□ -0.37
RPUSD3-204ENST00000424438 FAM234AQ9H0X4 552 aa12.74□□□□□ -0.37
RPUSD3-204ENST00000424438 DNTTIP1Q9H147 329 aa12.74□□□□□ -0.37
RPUSD3-204ENST00000424438 RERGLQ9H628 205 aa12.74□□□□□ -0.37
RPUSD3-204ENST00000424438 C1orf123Q9NWV4 160 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms