RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 PCP4L1A6NKN8 68 aa13.3□□□□□ -0.28
AP000550.1-201ENST00000420508 SMAD2Q15796 467 aaKnown RBP13.3□□□□□ -0.28
AP000550.1-201ENST00000420508 CLLU1Q5K131 121 aa13.3□□□□□ -0.28
AP000550.1-201ENST00000420508 REEP6Q96HR9 211 aa13.3□□□□□ -0.28
AP000550.1-201ENST00000420508 C2orf50Q96LR7 162 aa13.3□□□□□ -0.28
AP000550.1-201ENST00000420508 SHPKQ9UHJ6 478 aa13.3□□□□□ -0.28
AP000550.1-201ENST00000420508 ANKRD20A5PA0PJZ0 165 aa13.3□□□□□ -0.28
AP000550.1-201ENST00000420508 A6NL46 340 aa13.3□□□□□ -0.28
AP000550.1-201ENST00000420508 RFPL4AA6NLU0 287 aa13.3□□□□□ -0.28
AP000550.1-201ENST00000420508 RFPL4AL1F8VTS6 287 aa13.3□□□□□ -0.28
AP000550.1-201ENST00000420508 IFNA4P05014 189 aa13.3□□□□□ -0.28
AP000550.1-201ENST00000420508 FCARP24071 287 aa13.3□□□□□ -0.28
AP000550.1-201ENST00000420508 LUMP51884 338 aaPredicted RBP13.3□□□□□ -0.28
AP000550.1-201ENST00000420508 ZBTB37Q5TC79 503 aa13.3□□□□□ -0.28
AP000550.1-201ENST00000420508 OGFOD3Q6PK18 319 aa13.3□□□□□ -0.28
AP000550.1-201ENST00000420508 S100A7AQ86SG5 101 aa13.3□□□□□ -0.28
AP000550.1-201ENST00000420508 SF3B5Q9BWJ5 86 aaKnown RBP13.3□□□□□ -0.28
AP000550.1-201ENST00000420508 OR5V1Q9UGF6 321 aa13.3□□□□□ -0.28
AP000550.1-201ENST00000420508 BOLA1Q9Y3E2 137 aa13.3□□□□□ -0.28
AP000550.1-201ENST00000420508 OTOL1A6NHN0 477 aaPredicted RBP13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 PHF1O43189 567 aaPredicted RBP13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 HRO43593 1189 aa13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 DCTDP32321 178 aa13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 TAS2R30P59541 319 aa13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 SLC10A1Q14973 349 aa13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 LINC00303Q3SY05 128 aa13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 TMEM128Q5BJH2 165 aa13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 TERB2Q8NHR7 220 aa13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 BARHL1Q9BZE3 327 aa13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 GPR173Q9NS66 373 aa13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 IGKV1-8A0A0C4DH67 115 aa13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 G3V3Y1 287 aa13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 BET1O15155 118 aa13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 MAGEB4O15481 346 aaPredicted RBP13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 PRICKLE3O43900 615 aaPredicted RBP13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 GCM2O75603 506 aaPredicted RBP13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 EFEMP2O95967 443 aa13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 SMIM10L1P0DMW3 83 aa13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 FPR2P25090 351 aa13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 LSM6P62312 80 aaKnown RBP13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 SNTB1Q13884 538 aaKnown RBP13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 CORO6Q6QEF8 472 aa13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 SFTPA1Q8IWL2 248 aa13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 GALNT16Q8N428 558 aa13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 ZADH2Q8N4Q0 377 aa13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 IL1F10Q8WWZ1 152 aa13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 SARAFQ96BY9 339 aa13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 C8orf44Q96CB5 159 aa13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 ARSGQ96EG1 525 aa13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 SMIM10Q96HG1 83 aa13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 RNF150Q9ULK6 438 aa13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 TIMM8AO60220 97 aaPredicted RBP13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 TXNDC12O95881 172 aa13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 RPS4Y1P22090 263 aaKnown RBP13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 RAB5CP51148 216 aa13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 RAC1P63000 192 aa13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 FAM122BQ7Z309 247 aa13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 YRDCQ86U90 279 aaKnown RBP13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 ZNF485Q8NCK3 441 aa13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 SECTM1Q8WVN6 248 aa13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 SUCNR1Q9BXA5 334 aa13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 BANF2Q9H503 90 aa13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 WDR54Q9H977 334 aa13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 KPTNQ9Y664 436 aa13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 E5RGE8 158 aa13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 SMLR1H3BR10 107 aa13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 NXPH2O95156 264 aa13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 SRD5A2P31213 254 aa13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 NLRC3Q7RTR2 1065 aa13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 LSRQ86X29 649 aaPredicted RBP13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 ASB10Q8WXI3 467 aa13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 PRMT8Q9NR22 394 aaPredicted RBP13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 NSG2Q9Y328 171 aa13.29□□□□□ -0.28
AP000550.1-201ENST00000420508 SLC2A1P11166 492 aa13.28□□□□□ -0.28
AP000550.1-201ENST00000420508 BOLLQ8N9W6 283 aaKnown RBP13.28□□□□□ -0.28
AP000550.1-201ENST00000420508 OR51F2Q8NH61 342 aa13.28□□□□□ -0.28
AP000550.1-201ENST00000420508 ANGPTL6Q8NI99 470 aa13.28□□□□□ -0.28
AP000550.1-201ENST00000420508 PTP4A1Q93096 173 aa13.28□□□□□ -0.28
AP000550.1-201ENST00000420508 GNPNAT1Q96EK6 184 aaPredicted RBP13.28□□□□□ -0.28
AP000550.1-201ENST00000420508 HRH4Q9H3N8 390 aa13.28□□□□□ -0.28
AP000550.1-201ENST00000420508 TERTO14746 1132 aaKnown RBP13.28□□□□□ -0.28
AP000550.1-201ENST00000420508 RGS13O14921 159 aa13.28□□□□□ -0.28
AP000550.1-201ENST00000420508 CTAG2O75638 210 aa13.28□□□□□ -0.28
AP000550.1-201ENST00000420508 ACTL6BO94805 426 aa13.28□□□□□ -0.28
AP000550.1-201ENST00000420508 SLC22A25Q6T423 547 aa13.28□□□□□ -0.28
AP000550.1-201ENST00000420508 PTX4Q96A99 478 aa13.28□□□□□ -0.28
AP000550.1-201ENST00000420508 APOBEC3DQ96AK3 386 aaPredicted RBP13.28□□□□□ -0.28
AP000550.1-201ENST00000420508 MAP6Q96JE9 813 aa13.28□□□□□ -0.28
AP000550.1-201ENST00000420508 ZMAT3Q9HA38 289 aaKnown RBP13.28□□□□□ -0.28
AP000550.1-201ENST00000420508 RPS10P5Q9NQ39 176 aa13.28□□□□□ -0.28
AP000550.1-201ENST00000420508 PRELID3BQ9Y3B1 194 aa13.28□□□□□ -0.28
AP000550.1-201ENST00000420508 BTBD17A6NE02 478 aa13.28□□□□□ -0.28
AP000550.1-201ENST00000420508 SPINT1O43278 529 aa13.28□□□□□ -0.28
AP000550.1-201ENST00000420508 SPINT2O43291 252 aa13.28□□□□□ -0.28
AP000550.1-201ENST00000420508 BCL2L11O43521 198 aa13.28□□□□□ -0.28
AP000550.1-201ENST00000420508 EPPINO95925 133 aa13.28□□□□□ -0.28
AP000550.1-201ENST00000420508 CLN3Q13286 438 aa13.28□□□□□ -0.28
AP000550.1-201ENST00000420508 ADPRHL1Q8NDY3 354 aa13.28□□□□□ -0.28
AP000550.1-201ENST00000420508 OR1F12Q8NHA8 337 aa13.28□□□□□ -0.28
AP000550.1-201ENST00000420508 RNF170Q96K19 258 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms