RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 SIGLEC9Q9Y336 463 aa10.62□□□□□ -0.71
LINC00339-203ENST00000420503 TET2Q6N021 2002 aaPredicted RBP10.62□□□□□ -0.71
LINC00339-203ENST00000420503 LGALS8O00214 317 aa10.61□□□□□ -0.71
LINC00339-203ENST00000420503 NDUFB2O95178 105 aa10.61□□□□□ -0.71
LINC00339-203ENST00000420503 FSTL3O95633 263 aa10.61□□□□□ -0.71
LINC00339-203ENST00000420503 TFF1P04155 84 aa10.61□□□□□ -0.71
LINC00339-203ENST00000420503 LCATP04180 440 aa10.61□□□□□ -0.71
LINC00339-203ENST00000420503 IRF2P14316 349 aa10.61□□□□□ -0.71
LINC00339-203ENST00000420503 NCK1P16333 377 aa10.61□□□□□ -0.71
LINC00339-203ENST00000420503 OMPP47874 163 aa10.61□□□□□ -0.71
LINC00339-203ENST00000420503 COX10Q12887 443 aa10.61□□□□□ -0.71
LINC00339-203ENST00000420503 KLRD1Q13241 179 aa10.61□□□□□ -0.71
LINC00339-203ENST00000420503 OR8B8Q15620 311 aa10.61□□□□□ -0.71
LINC00339-203ENST00000420503 FAM90A1Q86YD7 464 aa10.61□□□□□ -0.71
LINC00339-203ENST00000420503 LNX2Q8N448 690 aa10.61□□□□□ -0.71
LINC00339-203ENST00000420503 FAM86B1Q8N7N1 296 aa10.61□□□□□ -0.71
LINC00339-203ENST00000420503 SLC26A10Q8NG04 563 aa10.61□□□□□ -0.71
LINC00339-203ENST00000420503 OR5L1Q8NGL2 311 aa10.61□□□□□ -0.71
LINC00339-203ENST00000420503 OR11L1Q8NGX0 322 aa10.61□□□□□ -0.71
LINC00339-203ENST00000420503 DYRK2Q92630 601 aa10.61□□□□□ -0.71
LINC00339-203ENST00000420503 GPX7Q96SL4 187 aaPredicted RBP10.61□□□□□ -0.71
LINC00339-203ENST00000420503 NMNAT3Q96T66 252 aa10.61□□□□□ -0.71
LINC00339-203ENST00000420503 SH3GL1Q99961 368 aa10.61□□□□□ -0.71
LINC00339-203ENST00000420503 HDHD2Q9H0R4 259 aa10.61□□□□□ -0.71
LINC00339-203ENST00000420503 SRA1Q9HD15 236 aaKnown RBP10.61□□□□□ -0.71
LINC00339-203ENST00000420503 ATPIF1Q9UII2 106 aa10.61□□□□□ -0.71
LINC00339-203ENST00000420503 B9D1Q9UPM9 204 aa10.61□□□□□ -0.71
LINC00339-203ENST00000420503 POMT1Q9Y6A1 747 aa10.61□□□□□ -0.71
LINC00339-203ENST00000420503 NBEAL2Q6ZNJ1 2754 aa10.6□□□□□ -0.71
LINC00339-203ENST00000420503 J3QW42 95 aa10.6□□□□□ -0.71
LINC00339-203ENST00000420503 CXCR6O00574 342 aa10.6□□□□□ -0.71
LINC00339-203ENST00000420503 DVL1O14640 695 aa10.6□□□□□ -0.71
LINC00339-203ENST00000420503 SERPINA1P01009 418 aa10.6□□□□□ -0.71
LINC00339-203ENST00000420503 SELLP14151 372 aa10.6□□□□□ -0.71
LINC00339-203ENST00000420503 CPT2P23786 658 aa10.6□□□□□ -0.71
LINC00339-203ENST00000420503 GGT2P36268 569 aa10.6□□□□□ -0.71
LINC00339-203ENST00000420503 ZNF92Q03936 586 aa10.6□□□□□ -0.71
LINC00339-203ENST00000420503 LIPEQ05469 1076 aa10.6□□□□□ -0.71
LINC00339-203ENST00000420503 EGR3Q06889 387 aa10.6□□□□□ -0.71
LINC00339-203ENST00000420503 TRAP1Q12931 704 aaKnown RBP10.6□□□□□ -0.71
LINC00339-203ENST00000420503 OR8G1Q15617 311 aa10.6□□□□□ -0.71
LINC00339-203ENST00000420503 ANKDD1AQ495B1 522 aa10.6□□□□□ -0.71
LINC00339-203ENST00000420503 IFI44LQ53G44 452 aa10.6□□□□□ -0.71
LINC00339-203ENST00000420503 METTL11BQ5VVY1 283 aa10.6□□□□□ -0.71
LINC00339-203ENST00000420503 BTN2A1Q7KYR7 527 aa10.6□□□□□ -0.71
LINC00339-203ENST00000420503 VMO1Q7Z5L0 202 aa10.6□□□□□ -0.71
LINC00339-203ENST00000420503 PIGWQ7Z7B1 504 aa10.6□□□□□ -0.71
LINC00339-203ENST00000420503 CPLX4Q7Z7G2 160 aa10.6□□□□□ -0.71
LINC00339-203ENST00000420503 WDR86Q86TI4 376 aa10.6□□□□□ -0.71
LINC00339-203ENST00000420503 SLC15A3Q8IY34 581 aa10.6□□□□□ -0.71
LINC00339-203ENST00000420503 RNF113BQ8IZP6 322 aaKnown RBP10.6□□□□□ -0.71
LINC00339-203ENST00000420503 GCSAMQ8N6F7 178 aa10.6□□□□□ -0.71
LINC00339-203ENST00000420503 C11orf44Q8N8P7 122 aa10.6□□□□□ -0.71
LINC00339-203ENST00000420503 ZSCAN4Q8NAM6 433 aaPredicted RBP10.6□□□□□ -0.71
LINC00339-203ENST00000420503 SCCPDHQ8NBX0 429 aa10.6□□□□□ -0.71
LINC00339-203ENST00000420503 GJC3Q8NFK1 279 aa10.6□□□□□ -0.71
LINC00339-203ENST00000420503 ZNRF4Q8WWF5 429 aa10.6□□□□□ -0.71
LINC00339-203ENST00000420503 MAP6Q96JE9 813 aa10.6□□□□□ -0.71
LINC00339-203ENST00000420503 PITX2Q99697 317 aa10.6□□□□□ -0.71
LINC00339-203ENST00000420503 ADAT1Q9BUB4 502 aaKnown RBP10.6□□□□□ -0.71
LINC00339-203ENST00000420503 HCAR1Q9BXC0 346 aa10.6□□□□□ -0.71
LINC00339-203ENST00000420503 FAM107BQ9H098 131 aa10.6□□□□□ -0.71
LINC00339-203ENST00000420503 NSRP1Q9H0G5 558 aaKnown RBP10.6□□□□□ -0.71
LINC00339-203ENST00000420503 SIRT7Q9NRC8 400 aa10.6□□□□□ -0.71
LINC00339-203ENST00000420503 MRPL22Q9NWU5 206 aaKnown RBP10.6□□□□□ -0.71
LINC00339-203ENST00000420503 C1orf123Q9NWV4 160 aa10.6□□□□□ -0.71
LINC00339-203ENST00000420503 ERVK-18Q9QC07 812 aa10.6□□□□□ -0.71
LINC00339-203ENST00000420503 RNF7Q9UBF6 113 aa10.6□□□□□ -0.71
LINC00339-203ENST00000420503 ZNF816-ZNF321PA0A0X1KG74 233 aa10.59□□□□□ -0.71
LINC00339-203ENST00000420503 HTR3EA5X5Y0 456 aa10.59□□□□□ -0.71
LINC00339-203ENST00000420503 OOEPA6NGQ2 149 aa10.59□□□□□ -0.71
LINC00339-203ENST00000420503 CD300LBA8K4G0 201 aa10.59□□□□□ -0.71
LINC00339-203ENST00000420503 NME4O00746 187 aa10.59□□□□□ -0.71
LINC00339-203ENST00000420503 SLC22A2O15244 555 aa10.59□□□□□ -0.71
LINC00339-203ENST00000420503 AHCYL1O43865 530 aa10.59□□□□□ -0.71
LINC00339-203ENST00000420503 TXNDC12O95881 172 aa10.59□□□□□ -0.71
LINC00339-203ENST00000420503 GRPP07492 148 aa10.59□□□□□ -0.71
LINC00339-203ENST00000420503 SLC2A1P11166 492 aa10.59□□□□□ -0.71
LINC00339-203ENST00000420503 PAX6P26367 422 aa10.59□□□□□ -0.71
LINC00339-203ENST00000420503 PDCD1Q15116 288 aa10.59□□□□□ -0.71
LINC00339-203ENST00000420503 BEAN1Q3B7T3 259 aa10.59□□□□□ -0.71
LINC00339-203ENST00000420503 COQ5Q5HYK3 327 aa10.59□□□□□ -0.71
LINC00339-203ENST00000420503 FGD3Q5JSP0 725 aa10.59□□□□□ -0.71
LINC00339-203ENST00000420503 GLYATL3Q5SZD4 288 aa10.59□□□□□ -0.71
LINC00339-203ENST00000420503 GPR139Q6DWJ6 353 aa10.59□□□□□ -0.71
LINC00339-203ENST00000420503 Q6ZPA2 131 aa10.59□□□□□ -0.71
LINC00339-203ENST00000420503 FKBP9P1Q75LS8 142 aa10.59□□□□□ -0.71
LINC00339-203ENST00000420503 CBLL1Q75N03 491 aa10.59□□□□□ -0.71
LINC00339-203ENST00000420503 PGAP1Q75T13 922 aa10.59□□□□□ -0.71
LINC00339-203ENST00000420503 LDLRAD3Q86YD5 345 aa10.59□□□□□ -0.71
LINC00339-203ENST00000420503 FAM216BQ8N7L0 139 aa10.59□□□□□ -0.71
LINC00339-203ENST00000420503 OR4K13Q8NH42 304 aa10.59□□□□□ -0.71
LINC00339-203ENST00000420503 OR52J3Q8NH60 311 aa10.59□□□□□ -0.71
LINC00339-203ENST00000420503 TBC1D15Q8TC07 691 aa10.59□□□□□ -0.71
LINC00339-203ENST00000420503 C17orf50Q8WW18 174 aa10.59□□□□□ -0.71
LINC00339-203ENST00000420503 SPRYD4Q8WW59 207 aaPredicted RBP10.59□□□□□ -0.71
LINC00339-203ENST00000420503 ST8SIA4Q92187 359 aa10.59□□□□□ -0.71
LINC00339-203ENST00000420503 ERMAPQ96PL5 475 aaPredicted RBP10.59□□□□□ -0.71
LINC00339-203ENST00000420503 TRIM15Q9C019 465 aa10.59□□□□□ -0.71
LINC00339-203ENST00000420503 MYLK2Q9H1R3 596 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms