RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 CMTM3Q96MX0 182 aa18.33■□□□□ 0.52
GPC1-202ENST00000420138 WACQ9BTA9 647 aa18.33■□□□□ 0.52
GPC1-202ENST00000420138 GPR84Q9NQS5 396 aa18.33■□□□□ 0.52
GPC1-202ENST00000420138 RBFOX1Q9NWB1 397 aaKnown RBP18.33■□□□□ 0.52
GPC1-202ENST00000420138 OR5V1Q9UGF6 321 aa18.33■□□□□ 0.52
GPC1-202ENST00000420138 A6NIN4 97 aa18.32■□□□□ 0.52
GPC1-202ENST00000420138 M0R135 149 aa18.32■□□□□ 0.52
GPC1-202ENST00000420138 LYRM1O43325 122 aa18.32■□□□□ 0.52
GPC1-202ENST00000420138 FAPQ12884 760 aa18.32■□□□□ 0.52
GPC1-202ENST00000420138 GUSBP1Q15486 140 aa18.32■□□□□ 0.52
GPC1-202ENST00000420138 FAM166AQ6J272 317 aa18.32■□□□□ 0.52
GPC1-202ENST00000420138 LYPD6Q86Y78 171 aa18.32■□□□□ 0.52
GPC1-202ENST00000420138 ZNF100Q8IYN0 542 aa18.32■□□□□ 0.52
GPC1-202ENST00000420138 OR5M9Q8NGP3 310 aa18.32■□□□□ 0.52
GPC1-202ENST00000420138 OR1F12Q8NHA8 337 aa18.32■□□□□ 0.52
GPC1-202ENST00000420138 ZNF671Q8TAW3 534 aa18.32■□□□□ 0.52
GPC1-202ENST00000420138 ZNF799Q96GE5 643 aa18.32■□□□□ 0.52
GPC1-202ENST00000420138 LYZL4Q96KX0 146 aa18.32■□□□□ 0.52
GPC1-202ENST00000420138 MED19A0JLT2 244 aaPredicted RBP18.31■□□□□ 0.52
GPC1-202ENST00000420138 SFRP5Q5T4F7 317 aa18.31■□□□□ 0.52
GPC1-202ENST00000420138 ZNF57Q68EA5 555 aaPredicted RBP18.31■□□□□ 0.52
GPC1-202ENST00000420138 ZNF529Q6P280 563 aa18.31■□□□□ 0.52
GPC1-202ENST00000420138 ABHD12BQ7Z5M8 362 aaPredicted RBP18.31■□□□□ 0.52
GPC1-202ENST00000420138 LUZP2Q86TE4 346 aa18.31■□□□□ 0.52
GPC1-202ENST00000420138 UBE2J2Q8N2K1 259 aa18.31■□□□□ 0.52
GPC1-202ENST00000420138 DTX3Q8N9I9 347 aa18.31■□□□□ 0.52
GPC1-202ENST00000420138 PLPP7Q8NBV4 271 aa18.31■□□□□ 0.52
GPC1-202ENST00000420138 RFT1Q96AA3 541 aa18.31■□□□□ 0.52
GPC1-202ENST00000420138 SLC25A38Q96DW6 304 aa18.31■□□□□ 0.52
GPC1-202ENST00000420138 TRIB1Q96RU8 372 aa18.31■□□□□ 0.52
GPC1-202ENST00000420138 THAP7Q9BT49 309 aaPredicted RBP18.31■□□□□ 0.52
GPC1-202ENST00000420138 C12orf49Q9H741 205 aa18.31■□□□□ 0.52
GPC1-202ENST00000420138 UPB1Q9UBR1 384 aa18.31■□□□□ 0.52
GPC1-202ENST00000420138 NCOR2Q9Y618 2525 aa18.31■□□□□ 0.52
GPC1-202ENST00000420138 A0A1B0GVI7 797 aa18.3■□□□□ 0.52
GPC1-202ENST00000420138 MEIOCA2RUB1 952 aa18.3■□□□□ 0.52
GPC1-202ENST00000420138 ITGA5P08648 1049 aa18.3■□□□□ 0.52
GPC1-202ENST00000420138 CALCBP10092 127 aa18.3■□□□□ 0.52
GPC1-202ENST00000420138 OR3A2P47893 321 aa18.3■□□□□ 0.52
GPC1-202ENST00000420138 PCBD1P61457 104 aa18.3■□□□□ 0.52
GPC1-202ENST00000420138 ECH1Q13011 328 aa18.3■□□□□ 0.52
GPC1-202ENST00000420138 ZBTB8BQ8NAP8 495 aaPredicted RBP18.3■□□□□ 0.52
GPC1-202ENST00000420138 DUSP18Q8NEJ0 188 aa18.3■□□□□ 0.52
GPC1-202ENST00000420138 SPTSSAQ969W0 71 aa18.3■□□□□ 0.52
GPC1-202ENST00000420138 PGAM5Q96HS1 289 aa18.3■□□□□ 0.52
GPC1-202ENST00000420138 RNF121Q9H920 327 aa18.3■□□□□ 0.52
GPC1-202ENST00000420138 CKLFQ9UBR5 152 aa18.3■□□□□ 0.52
GPC1-202ENST00000420138 ZNF503-AS2A6NEH8 195 aa18.3■□□□□ 0.52
GPC1-202ENST00000420138 FARS2O95363 451 aaKnown RBP18.3■□□□□ 0.52
GPC1-202ENST00000420138 DDOSTP39656 456 aa18.3■□□□□ 0.52
GPC1-202ENST00000420138 NR4A2P43354 598 aa18.3■□□□□ 0.52
GPC1-202ENST00000420138 PITPNAQ00169 270 aa18.3■□□□□ 0.52
GPC1-202ENST00000420138 PLET1Q6UQ28 207 aa18.3■□□□□ 0.52
GPC1-202ENST00000420138 BAIAP2L2Q6UXY1 529 aa18.3■□□□□ 0.52
GPC1-202ENST00000420138 P4HA3Q7Z4N8 544 aa18.3■□□□□ 0.52
GPC1-202ENST00000420138 ABHD1Q96SE0 405 aa18.3■□□□□ 0.52
GPC1-202ENST00000420138 NKX3-1Q99801 234 aaPredicted RBP18.3■□□□□ 0.52
GPC1-202ENST00000420138 GLRX2Q9NS18 164 aa18.3■□□□□ 0.52
GPC1-202ENST00000420138 STEAP1Q9UHE8 339 aa18.3■□□□□ 0.52
GPC1-202ENST00000420138 RHBDD3Q9Y3P4 386 aa18.3■□□□□ 0.52
GPC1-202ENST00000420138 BOD1L1Q8NFC6 3051 aa18.29■□□□□ 0.52
GPC1-202ENST00000420138 A0A096LPE4 126 aa18.29■□□□□ 0.52
GPC1-202ENST00000420138 A0A0U1RQV5 110 aa18.29■□□□□ 0.52
GPC1-202ENST00000420138 A0A1W2PPZ6 126 aa18.29■□□□□ 0.52
GPC1-202ENST00000420138 UBL3O95164 117 aa18.29■□□□□ 0.52
GPC1-202ENST00000420138 IL18BPO95998 194 aa18.29■□□□□ 0.52
GPC1-202ENST00000420138 SLC6A9P48067 706 aa18.29■□□□□ 0.52
GPC1-202ENST00000420138 ATMQ13315 3056 aa18.29■□□□□ 0.52
GPC1-202ENST00000420138 SNAI3Q3KNW1 292 aa18.29■□□□□ 0.52
GPC1-202ENST00000420138 UBE2NLQ5JXB2 153 aa18.29■□□□□ 0.52
GPC1-202ENST00000420138 HACD4Q5VWC8 232 aa18.29■□□□□ 0.52
GPC1-202ENST00000420138 FBXW9Q5XUX1 488 aa18.29■□□□□ 0.52
GPC1-202ENST00000420138 DRAM2Q6UX65 266 aa18.29■□□□□ 0.52
GPC1-202ENST00000420138 Q6ZSR3 168 aa18.29■□□□□ 0.52
GPC1-202ENST00000420138 SERPINA12Q8IW75 414 aa18.29■□□□□ 0.52
GPC1-202ENST00000420138 CMTM4Q8IZR5 234 aa18.29■□□□□ 0.52
GPC1-202ENST00000420138 CPEB3Q8NE35 698 aaKnown RBP18.29■□□□□ 0.52
GPC1-202ENST00000420138 OR14K1Q8NGZ2 314 aa18.29■□□□□ 0.52
GPC1-202ENST00000420138 SLC25A28Q96A46 364 aa18.29■□□□□ 0.52
GPC1-202ENST00000420138 MRI1Q9BV20 369 aa18.29■□□□□ 0.52
GPC1-202ENST00000420138 ZNF71Q9NQZ8 489 aaPredicted RBP18.29■□□□□ 0.52
GPC1-202ENST00000420138 LUZP4Q9P127 313 aa18.29■□□□□ 0.52
GPC1-202ENST00000420138 FAM240BA0A1B0GVZ2 78 aa18.28■□□□□ 0.52
GPC1-202ENST00000420138 OR14I1A6ND48 311 aa18.28■□□□□ 0.52
GPC1-202ENST00000420138 SLC17A2O00624 439 aa18.28■□□□□ 0.52
GPC1-202ENST00000420138 CCNKO75909 580 aa18.28■□□□□ 0.52
GPC1-202ENST00000420138 APOC1P02654 83 aa18.28■□□□□ 0.52
GPC1-202ENST00000420138 ABOP16442 354 aa18.28■□□□□ 0.52
GPC1-202ENST00000420138 HOXD11P31277 338 aaPredicted RBP18.28■□□□□ 0.52
GPC1-202ENST00000420138 SPOCK1Q08629 439 aa18.28■□□□□ 0.52
GPC1-202ENST00000420138 PLA2G7Q13093 441 aa18.28■□□□□ 0.52
GPC1-202ENST00000420138 ACSF3Q4G176 576 aaPredicted RBP18.28■□□□□ 0.52
GPC1-202ENST00000420138 DOK3Q7L591 496 aa18.28■□□□□ 0.52
GPC1-202ENST00000420138 GCNT2Q8N0V5 402 aa18.28■□□□□ 0.52
GPC1-202ENST00000420138 C9orf106Q8NAJ2 232 aa18.28■□□□□ 0.52
GPC1-202ENST00000420138 TRIM63Q969Q1 353 aa18.28■□□□□ 0.52
GPC1-202ENST00000420138 FAM71F1Q96KD3 344 aaPredicted RBP18.28■□□□□ 0.52
GPC1-202ENST00000420138 RABL2AQ9UBK7 228 aaPredicted RBP18.28■□□□□ 0.52
GPC1-202ENST00000420138 RABL2BQ9UNT1 228 aa18.28■□□□□ 0.52
GPC1-202ENST00000420138 LOC390937A0A1W2PQ73 354 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms