RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 ACTL6AO96019 429 aa13.2□□□□□ -0.3
SEMA4D-204ENST00000420101 IL2RAP01589 272 aa13.2□□□□□ -0.3
SEMA4D-204ENST00000420101 IGHEP01854 428 aa13.2□□□□□ -0.3
SEMA4D-204ENST00000420101 NPBWR1P48145 328 aa13.2□□□□□ -0.3
SEMA4D-204ENST00000420101 CAV2P51636 162 aa13.2□□□□□ -0.3
SEMA4D-204ENST00000420101 RPS15P62841 145 aaKnown RBP13.2□□□□□ -0.3
SEMA4D-204ENST00000420101 AIMP2Q13155 320 aaKnown RBP13.2□□□□□ -0.3
SEMA4D-204ENST00000420101 EXT1Q16394 746 aa13.2□□□□□ -0.3
SEMA4D-204ENST00000420101 Q3ZCU0 254 aa13.2□□□□□ -0.3
SEMA4D-204ENST00000420101 ZNF684Q5T5D7 378 aa13.2□□□□□ -0.3
SEMA4D-204ENST00000420101 TMEM244Q5VVB8 128 aa13.2□□□□□ -0.3
SEMA4D-204ENST00000420101 POMZP3Q6PJE2 187 aa13.2□□□□□ -0.3
SEMA4D-204ENST00000420101 NAA40Q86UY6 237 aa13.2□□□□□ -0.3
SEMA4D-204ENST00000420101 ANGPTL5Q86XS5 388 aa13.2□□□□□ -0.3
SEMA4D-204ENST00000420101 C10orf53Q8N6V4 93 aa13.2□□□□□ -0.3
SEMA4D-204ENST00000420101 ZDHHC22Q8N966 263 aa13.2□□□□□ -0.3
SEMA4D-204ENST00000420101 OR5AK2Q8NH90 309 aa13.2□□□□□ -0.3
SEMA4D-204ENST00000420101 ZBTB8AQ96BR9 441 aa13.2□□□□□ -0.3
SEMA4D-204ENST00000420101 C3orf49Q96BT1 292 aa13.2□□□□□ -0.3
SEMA4D-204ENST00000420101 RTN4RQ9BZR6 473 aa13.2□□□□□ -0.3
SEMA4D-204ENST00000420101 MYOTQ9UBF9 498 aa13.2□□□□□ -0.3
SEMA4D-204ENST00000420101 ZNF337Q9Y3M9 751 aa13.2□□□□□ -0.3
SEMA4D-204ENST00000420101 HS3ST3B1Q9Y662 390 aa13.2□□□□□ -0.3
SEMA4D-204ENST00000420101 TRBV5-7A0A0A0MS05 114 aa13.19□□□□□ -0.3
SEMA4D-204ENST00000420101 C9orf172C9J069 976 aa13.19□□□□□ -0.3
SEMA4D-204ENST00000420101 MFNGO00587 321 aa13.19□□□□□ -0.3
SEMA4D-204ENST00000420101 ARPC3O15145 178 aa13.19□□□□□ -0.3
SEMA4D-204ENST00000420101 FADS1O60427 444 aa13.19□□□□□ -0.3
SEMA4D-204ENST00000420101 AKR7A3O95154 331 aa13.19□□□□□ -0.3
SEMA4D-204ENST00000420101 ZFPL1O95159 310 aa13.19□□□□□ -0.3
SEMA4D-204ENST00000420101 RAB3DO95716 219 aa13.19□□□□□ -0.3
SEMA4D-204ENST00000420101 NGFRP08138 427 aa13.19□□□□□ -0.3
SEMA4D-204ENST00000420101 CD14P08571 375 aa13.19□□□□□ -0.3
SEMA4D-204ENST00000420101 CLUP10909 449 aa13.19□□□□□ -0.3
SEMA4D-204ENST00000420101 PGCP20142 388 aa13.19□□□□□ -0.3
SEMA4D-204ENST00000420101 EIF2S3P41091 472 aaKnown RBP13.19□□□□□ -0.3
SEMA4D-204ENST00000420101 SLC6A9P48067 706 aa13.19□□□□□ -0.3
SEMA4D-204ENST00000420101 CAPZA1P52907 286 aa13.19□□□□□ -0.3
SEMA4D-204ENST00000420101 DHRS2Q13268 280 aa13.19□□□□□ -0.3
SEMA4D-204ENST00000420101 ALKBH1Q13686 389 aaKnown RBP13.19□□□□□ -0.3
SEMA4D-204ENST00000420101 FAM76BQ5HYJ3 339 aa13.19□□□□□ -0.3
SEMA4D-204ENST00000420101 TIPARPQ7Z3E1 657 aaKnown RBP13.19□□□□□ -0.3
SEMA4D-204ENST00000420101 TMPRSS12Q86WS5 348 aa13.19□□□□□ -0.3
SEMA4D-204ENST00000420101 WDSUB1Q8N9V3 476 aa13.19□□□□□ -0.3
SEMA4D-204ENST00000420101 OR51A7Q8NH64 312 aa13.19□□□□□ -0.3
SEMA4D-204ENST00000420101 PPP1R1CQ8WVI7 109 aa13.19□□□□□ -0.3
SEMA4D-204ENST00000420101 ZMYND19Q96E35 227 aaPredicted RBP13.19□□□□□ -0.3
SEMA4D-204ENST00000420101 MALSU1Q96EH3 234 aa13.19□□□□□ -0.3
SEMA4D-204ENST00000420101 PRRT1Q99946 306 aa13.19□□□□□ -0.3
SEMA4D-204ENST00000420101 BCL2L14Q9BZR8 327 aa13.19□□□□□ -0.3
SEMA4D-204ENST00000420101 ZNF700Q9H0M5 742 aa13.19□□□□□ -0.3
SEMA4D-204ENST00000420101 ZNF160Q9HCG1 818 aa13.19□□□□□ -0.3
SEMA4D-204ENST00000420101 KLRF1Q9NZS2 232 aa13.19□□□□□ -0.3
SEMA4D-204ENST00000420101 FOXJ2Q9P0K8 574 aa13.19□□□□□ -0.3
SEMA4D-204ENST00000420101 TCFL5Q9UL49 500 aa13.19□□□□□ -0.3
SEMA4D-204ENST00000420101 MOKQ9UQ07 419 aa13.19□□□□□ -0.3
SEMA4D-204ENST00000420101 FARSAQ9Y285 508 aaKnown RBP13.19□□□□□ -0.3
SEMA4D-204ENST00000420101 TRAV27A0A087WT01 109 aa13.18□□□□□ -0.3
SEMA4D-204ENST00000420101 A0A087WUJ7 227 aa13.18□□□□□ -0.3
SEMA4D-204ENST00000420101 C2orf72A6NCS6 295 aa13.18□□□□□ -0.3
SEMA4D-204ENST00000420101 TVP23AA6NH52 213 aa13.18□□□□□ -0.3
SEMA4D-204ENST00000420101 C17orf51A8MQB3 221 aa13.18□□□□□ -0.3
SEMA4D-204ENST00000420101 PNMTP11086 282 aa13.18□□□□□ -0.3
SEMA4D-204ENST00000420101 DMDP11532 3685 aa13.18□□□□□ -0.3
SEMA4D-204ENST00000420101 COX6A1P12074 109 aa13.18□□□□□ -0.3
SEMA4D-204ENST00000420101 CLDN12P56749 244 aa13.18□□□□□ -0.3
SEMA4D-204ENST00000420101 UBE2MP61081 183 aaKnown RBP13.18□□□□□ -0.3
SEMA4D-204ENST00000420101 DNLZQ5SXM8 178 aa13.18□□□□□ -0.3
SEMA4D-204ENST00000420101 DPY19L2P2Q6ZN68 376 aa13.18□□□□□ -0.3
SEMA4D-204ENST00000420101 SLC16A13Q7RTY0 426 aa13.18□□□□□ -0.3
SEMA4D-204ENST00000420101 LYG2Q86SG7 212 aa13.18□□□□□ -0.3
SEMA4D-204ENST00000420101 SLC25A42Q86VD7 318 aa13.18□□□□□ -0.3
SEMA4D-204ENST00000420101 CYB561A3Q8NBI2 242 aa13.18□□□□□ -0.3
SEMA4D-204ENST00000420101 OR52E2Q8NGJ4 325 aa13.18□□□□□ -0.3
SEMA4D-204ENST00000420101 MITD1Q8WV92 249 aa13.18□□□□□ -0.3
SEMA4D-204ENST00000420101 PHB2Q99623 299 aa13.18□□□□□ -0.3
SEMA4D-204ENST00000420101 PAPOLGQ9BWT3 736 aaKnown RBP13.18□□□□□ -0.3
SEMA4D-204ENST00000420101 METTL7AQ9H8H3 244 aa13.18□□□□□ -0.3
SEMA4D-204ENST00000420101 NOP16Q9Y3C1 178 aaKnown RBP13.18□□□□□ -0.3
SEMA4D-204ENST00000420101 KPTNQ9Y664 436 aa13.18□□□□□ -0.3
SEMA4D-204ENST00000420101 LOC100289279A0A1B0GTE1 492 aa13.18□□□□□ -0.3
SEMA4D-204ENST00000420101 ZNF354AO60765 605 aaPredicted RBP13.18□□□□□ -0.3
SEMA4D-204ENST00000420101 GLCEO94923 617 aa13.18□□□□□ -0.3
SEMA4D-204ENST00000420101 TNFSF15O95150 251 aa13.18□□□□□ -0.3
SEMA4D-204ENST00000420101 IGHV2-5P01817 119 aa13.18□□□□□ -0.3
SEMA4D-204ENST00000420101 CD3DP04234 171 aa13.18□□□□□ -0.3
SEMA4D-204ENST00000420101 CELA2AP08217 269 aa13.18□□□□□ -0.3
SEMA4D-204ENST00000420101 GP1BBP13224 206 aa13.18□□□□□ -0.3
SEMA4D-204ENST00000420101 TACR3P29371 465 aa13.18□□□□□ -0.3
SEMA4D-204ENST00000420101 CX3CR1P49238 355 aa13.18□□□□□ -0.3
SEMA4D-204ENST00000420101 CD81P60033 236 aa13.18□□□□□ -0.3
SEMA4D-204ENST00000420101 NUP54Q7Z3B4 507 aa13.18□□□□□ -0.3
SEMA4D-204ENST00000420101 PIP4P1Q86T03 277 aa13.18□□□□□ -0.3
SEMA4D-204ENST00000420101 OR4K17Q8NGC6 315 aa13.18□□□□□ -0.3
SEMA4D-204ENST00000420101 NUDCD2Q8WVJ2 157 aa13.18□□□□□ -0.3
SEMA4D-204ENST00000420101 RGP1Q92546 391 aaPredicted RBP13.18□□□□□ -0.3
SEMA4D-204ENST00000420101 FOXRED1Q96CU9 486 aaPredicted RBP13.18□□□□□ -0.3
SEMA4D-204ENST00000420101 SMIM8Q96KF7 97 aa13.18□□□□□ -0.3
SEMA4D-204ENST00000420101 LRFN3Q9BTN0 628 aa13.18□□□□□ -0.3
SEMA4D-204ENST00000420101 NMNAT2Q9BZQ4 307 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms