RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 MAP6Q96JE9 813 aa14.4□□□□□ -0.1
PTCD1-202ENST00000419981 NSMCE2Q96MF7 247 aa14.4□□□□□ -0.1
PTCD1-202ENST00000419981 TECTBQ96PL2 329 aa14.4□□□□□ -0.1
PTCD1-202ENST00000419981 ADAT1Q9BUB4 502 aaKnown RBP14.4□□□□□ -0.1
PTCD1-202ENST00000419981 MMADHCQ9H3L0 296 aaPredicted RBP14.4□□□□□ -0.1
PTCD1-202ENST00000419981 FN3KRPQ9HA64 309 aa14.4□□□□□ -0.1
PTCD1-202ENST00000419981 CD300LBA8K4G0 201 aa14.39□□□□□ -0.11
PTCD1-202ENST00000419981 ARPC2O15144 300 aa14.39□□□□□ -0.11
PTCD1-202ENST00000419981 GMDSO60547 372 aa14.39□□□□□ -0.11
PTCD1-202ENST00000419981 CA6P23280 308 aa14.39□□□□□ -0.11
PTCD1-202ENST00000419981 PYCR1P32322 319 aa14.39□□□□□ -0.11
PTCD1-202ENST00000419981 PSMB10P40306 273 aa14.39□□□□□ -0.11
PTCD1-202ENST00000419981 RPS27P42677 84 aaKnown RBP14.39□□□□□ -0.11
PTCD1-202ENST00000419981 KCNJ8Q15842 424 aa14.39□□□□□ -0.11
PTCD1-202ENST00000419981 SNAI3Q3KNW1 292 aa14.39□□□□□ -0.11
PTCD1-202ENST00000419981 SAMD4BQ5PRF9 694 aaKnown RBP14.39□□□□□ -0.11
PTCD1-202ENST00000419981 RPL13AP3Q6NVV1 102 aa14.39□□□□□ -0.11
PTCD1-202ENST00000419981 PGBD2Q6P3X8 592 aa14.39□□□□□ -0.11
PTCD1-202ENST00000419981 C16orf87Q6PH81 154 aa14.39□□□□□ -0.11
PTCD1-202ENST00000419981 ZNF841Q6ZN19 808 aa14.39□□□□□ -0.11
PTCD1-202ENST00000419981 SPATC1Q76KD6 591 aa14.39□□□□□ -0.11
PTCD1-202ENST00000419981 PROKR2Q8NFJ6 384 aa14.39□□□□□ -0.11
PTCD1-202ENST00000419981 ZDHHC16Q969W1 377 aa14.39□□□□□ -0.11
PTCD1-202ENST00000419981 EGLN3Q9H6Z9 239 aa14.39□□□□□ -0.11
PTCD1-202ENST00000419981 IL1RAPQ9NPH3 570 aa14.39□□□□□ -0.11
PTCD1-202ENST00000419981 RNF7Q9UBF6 113 aa14.39□□□□□ -0.11
PTCD1-202ENST00000419981 GGT3PA6NGU5 568 aa14.38□□□□□ -0.11
PTCD1-202ENST00000419981 C22orf46C9J442 243 aa14.38□□□□□ -0.11
PTCD1-202ENST00000419981 HOXA3O43365 443 aaPredicted RBP14.38□□□□□ -0.11
PTCD1-202ENST00000419981 MDKP21741 143 aaPredicted RBP14.38□□□□□ -0.11
PTCD1-202ENST00000419981 MSX2P35548 267 aaPredicted RBP14.38□□□□□ -0.11
PTCD1-202ENST00000419981 BPIFB3P59826 476 aa14.38□□□□□ -0.11
PTCD1-202ENST00000419981 ZNF92Q03936 586 aa14.38□□□□□ -0.11
PTCD1-202ENST00000419981 DEFB112Q30KQ8 113 aa14.38□□□□□ -0.11
PTCD1-202ENST00000419981 ZDHHC21Q8IVQ6 265 aa14.38□□□□□ -0.11
PTCD1-202ENST00000419981 PGAM4Q8N0Y7 254 aa14.38□□□□□ -0.11
PTCD1-202ENST00000419981 CYB561A3Q8NBI2 242 aa14.38□□□□□ -0.11
PTCD1-202ENST00000419981 OR2AE1Q8NHA4 323 aa14.38□□□□□ -0.11
PTCD1-202ENST00000419981 TAF15Q92804 592 aaKnown RBP eCLIP14.38□□□□□ -0.11
PTCD1-202ENST00000419981 TMIGD2Q96BF3 282 aa14.38□□□□□ -0.11
PTCD1-202ENST00000419981 FAM107BQ9H098 131 aa14.38□□□□□ -0.11
PTCD1-202ENST00000419981 SLITRK2Q9H156 845 aa14.38□□□□□ -0.11
PTCD1-202ENST00000419981 KIF17Q9P2E2 1029 aa14.38□□□□□ -0.11
PTCD1-202ENST00000419981 ERVK-18Q9QC07 812 aa14.38□□□□□ -0.11
PTCD1-202ENST00000419981 CTSZQ9UBR2 303 aa14.38□□□□□ -0.11
PTCD1-202ENST00000419981 CDH10Q9Y6N8 788 aa14.38□□□□□ -0.11
PTCD1-202ENST00000419981 TVP23AA6NH52 213 aa14.37□□□□□ -0.11
PTCD1-202ENST00000419981 SRRM5B3KS81 715 aa14.37□□□□□ -0.11
PTCD1-202ENST00000419981 LGALS8O00214 317 aa14.37□□□□□ -0.11
PTCD1-202ENST00000419981 OTX1P32242 354 aaPredicted RBP14.37□□□□□ -0.11
PTCD1-202ENST00000419981 HOXA4Q00056 320 aaPredicted RBP14.37□□□□□ -0.11
PTCD1-202ENST00000419981 OR8B8Q15620 311 aa14.37□□□□□ -0.11
PTCD1-202ENST00000419981 GLYATL3Q5SZD4 288 aa14.37□□□□□ -0.11
PTCD1-202ENST00000419981 CD276Q5ZPR3 534 aa14.37□□□□□ -0.11
PTCD1-202ENST00000419981 SFRP4Q6FHJ7 346 aaPredicted RBP14.37□□□□□ -0.11
PTCD1-202ENST00000419981 DRAM2Q6UX65 266 aa14.37□□□□□ -0.11
PTCD1-202ENST00000419981 DCXRQ7Z4W1 244 aa14.37□□□□□ -0.11
PTCD1-202ENST00000419981 BOLLQ8N9W6 283 aaKnown RBP14.37□□□□□ -0.11
PTCD1-202ENST00000419981 PLPP7Q8NBV4 271 aa14.37□□□□□ -0.11
PTCD1-202ENST00000419981 OR4C15Q8NGM1 316 aa14.37□□□□□ -0.11
PTCD1-202ENST00000419981 OR2T4Q8NH00 348 aa14.37□□□□□ -0.11
PTCD1-202ENST00000419981 PCGF1Q9BSM1 259 aa14.37□□□□□ -0.11
PTCD1-202ENST00000419981 COPS4Q9BT78 406 aa14.37□□□□□ -0.11
PTCD1-202ENST00000419981 PRDM13Q9H4Q3 707 aa14.37□□□□□ -0.11
PTCD1-202ENST00000419981 TRIM36Q9NQ86 728 aa14.37□□□□□ -0.11
PTCD1-202ENST00000419981 MRPL15Q9P015 296 aaKnown RBP14.37□□□□□ -0.11
PTCD1-202ENST00000419981 CD300AQ9UGN4 299 aa14.37□□□□□ -0.11
PTCD1-202ENST00000419981 COMMD3-BMI1R4GMX3 469 aa14.37□□□□□ -0.11
PTCD1-202ENST00000419981 TRAV38-1A0A0B4J264 116 aa14.36□□□□□ -0.11
PTCD1-202ENST00000419981 C3orf80F5H4A9 247 aa14.36□□□□□ -0.11
PTCD1-202ENST00000419981 P2RY10O00398 339 aa14.36□□□□□ -0.11
PTCD1-202ENST00000419981 BHLHE40O14503 412 aa14.36□□□□□ -0.11
PTCD1-202ENST00000419981 KCNAB3O43448 404 aa14.36□□□□□ -0.11
PTCD1-202ENST00000419981 ADAM20O43506 726 aa14.36□□□□□ -0.11
PTCD1-202ENST00000419981 PTBP3O95758 552 aaKnown RBP14.36□□□□□ -0.11
PTCD1-202ENST00000419981 OMGP23515 440 aa14.36□□□□□ -0.11
PTCD1-202ENST00000419981 CFHR2P36980 270 aa14.36□□□□□ -0.11
PTCD1-202ENST00000419981 LYPD4Q6UWN0 246 aa14.36□□□□□ -0.11
PTCD1-202ENST00000419981 TREML4Q6UXN2 200 aa14.36□□□□□ -0.11
PTCD1-202ENST00000419981 OR9Q2Q8NGE9 314 aa14.36□□□□□ -0.11
PTCD1-202ENST00000419981 OR51L1Q8NGJ5 315 aa14.36□□□□□ -0.11
PTCD1-202ENST00000419981 CDRT15Q96T59 188 aa14.36□□□□□ -0.11
PTCD1-202ENST00000419981 OPA3Q9H6K4 179 aa14.36□□□□□ -0.11
PTCD1-202ENST00000419981 NOX4Q9NPH5 578 aa14.36□□□□□ -0.11
PTCD1-202ENST00000419981 LYVE1Q9Y5Y7 322 aa14.36□□□□□ -0.11
PTCD1-202ENST00000419981 MEGF8Q7Z7M0 2845 aa14.36□□□□□ -0.11
PTCD1-202ENST00000419981 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.35□□□□□ -0.11
PTCD1-202ENST00000419981 OOEPA6NGQ2 149 aa14.35□□□□□ -0.11
PTCD1-202ENST00000419981 A6NLC8 198 aa14.35□□□□□ -0.11
PTCD1-202ENST00000419981 ZNF879B4DU55 563 aa14.35□□□□□ -0.11
PTCD1-202ENST00000419981 NDUFA2O43678 99 aa14.35□□□□□ -0.11
PTCD1-202ENST00000419981 SNX3O60493 162 aa14.35□□□□□ -0.11
PTCD1-202ENST00000419981 KRT36O76013 467 aa14.35□□□□□ -0.11
PTCD1-202ENST00000419981 TOX4O94842 621 aa14.35□□□□□ -0.11
PTCD1-202ENST00000419981 LIPFP07098 398 aa14.35□□□□□ -0.11
PTCD1-202ENST00000419981 SFTPBP07988 381 aa14.35□□□□□ -0.11
PTCD1-202ENST00000419981 SPARCP09486 303 aa14.35□□□□□ -0.11
PTCD1-202ENST00000419981 PSKH1P11801 424 aa14.35□□□□□ -0.11
PTCD1-202ENST00000419981 ANOS1P23352 680 aa14.35□□□□□ -0.11
PTCD1-202ENST00000419981 ENTPD1P49961 510 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms