RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 GAL3ST2Q9H3Q3 398 aa15.18■□□□□ 0.02
SYNGAP1-202ENST00000418600 PARP14Q460N5 1801 aa15.18■□□□□ 0.02
SYNGAP1-202ENST00000418600 HIST1H1CP16403 213 aaKnown RBP15.18■□□□□ 0.02
SYNGAP1-202ENST00000418600 YAE1D1Q9NRH1 226 aa15.18■□□□□ 0.02
SYNGAP1-202ENST00000418600 CISD1Q9NZ45 108 aaKnown RBP15.18■□□□□ 0.02
SYNGAP1-202ENST00000418600 NLKQ9UBE8 527 aa15.18■□□□□ 0.02
SYNGAP1-202ENST00000418600 DOCK5Q9H7D0 1870 aa15.17■□□□□ 0.02
SYNGAP1-202ENST00000418600 CALCBP10092 127 aa15.17■□□□□ 0.02
SYNGAP1-202ENST00000418600 MPGP29372 298 aa15.17■□□□□ 0.02
SYNGAP1-202ENST00000418600 NCS1P62166 190 aa15.17■□□□□ 0.02
SYNGAP1-202ENST00000418600 YBX1P67809 324 aaKnown RBP15.17■□□□□ 0.02
SYNGAP1-202ENST00000418600 METAP1DQ6UB28 335 aaPredicted RBP15.17■□□□□ 0.02
SYNGAP1-202ENST00000418600 ZNF679Q8IYX0 411 aa15.17■□□□□ 0.02
SYNGAP1-202ENST00000418600 TMEM251Q8N6I4 163 aa15.17■□□□□ 0.02
SYNGAP1-202ENST00000418600 BTF3L4Q96K17 158 aa15.17■□□□□ 0.02
SYNGAP1-202ENST00000418600 LRFN5Q96NI6 719 aa15.17■□□□□ 0.02
SYNGAP1-202ENST00000418600 DIRC2Q96SL1 478 aa15.17■□□□□ 0.02
SYNGAP1-202ENST00000418600 JAM3Q9BX67 310 aa15.17■□□□□ 0.02
SYNGAP1-202ENST00000418600 UBQLN3Q9H347 655 aa15.17■□□□□ 0.02
SYNGAP1-202ENST00000418600 GPR84Q9NQS5 396 aa15.17■□□□□ 0.02
SYNGAP1-202ENST00000418600 KIF13BQ9NQT8 1826 aa15.17■□□□□ 0.02
SYNGAP1-202ENST00000418600 A0A1W2PRD5 423 aa15.17■□□□□ 0.02
SYNGAP1-202ENST00000418600 A0A1W2PRF3 423 aa15.17■□□□□ 0.02
SYNGAP1-202ENST00000418600 A0A1W2PRM7 423 aa15.17■□□□□ 0.02
SYNGAP1-202ENST00000418600 TGM6O95932 706 aa15.17■□□□□ 0.02
SYNGAP1-202ENST00000418600 CD59P13987 128 aa15.17■□□□□ 0.02
SYNGAP1-202ENST00000418600 DDOSTP39656 456 aa15.17■□□□□ 0.02
SYNGAP1-202ENST00000418600 RNLSQ5VYX0 342 aa15.17■□□□□ 0.02
SYNGAP1-202ENST00000418600 CORO2AQ92828 525 aa15.17■□□□□ 0.02
SYNGAP1-202ENST00000418600 PPIL3Q9H2H8 161 aaKnown RBP15.17■□□□□ 0.02
SYNGAP1-202ENST00000418600 BCL2L10Q9HD36 194 aa15.17■□□□□ 0.02
SYNGAP1-202ENST00000418600 PLCXD1Q9NUJ7 323 aa15.17■□□□□ 0.02
SYNGAP1-202ENST00000418600 ASF1BQ9NVP2 202 aa15.17■□□□□ 0.02
SYNGAP1-202ENST00000418600 CELA2AP08217 269 aa15.17■□□□□ 0.02
SYNGAP1-202ENST00000418600 GPX2P18283 190 aa15.17■□□□□ 0.02
SYNGAP1-202ENST00000418600 MRPL19P49406 292 aaKnown RBP15.17■□□□□ 0.02
SYNGAP1-202ENST00000418600 OR6K3Q8NGY3 331 aa15.17■□□□□ 0.02
SYNGAP1-202ENST00000418600 NECAP2Q9NVZ3 263 aa15.17■□□□□ 0.02
SYNGAP1-202ENST00000418600 AIPO00170 330 aa15.17■□□□□ 0.02
SYNGAP1-202ENST00000418600 SOD1P00441 154 aa15.17■□□□□ 0.02
SYNGAP1-202ENST00000418600 IL13RA1P78552 427 aa15.17■□□□□ 0.02
SYNGAP1-202ENST00000418600 LIPNQ5VXI9 398 aa15.17■□□□□ 0.02
SYNGAP1-202ENST00000418600 SLAMF9Q96A28 289 aa15.17■□□□□ 0.02
SYNGAP1-202ENST00000418600 PBOV1Q9GZY1 135 aa15.17■□□□□ 0.02
SYNGAP1-202ENST00000418600 TUBB1Q9H4B7 451 aa15.17■□□□□ 0.02
SYNGAP1-202ENST00000418600 HINT3Q9NQE9 182 aaKnown RBP15.17■□□□□ 0.02
SYNGAP1-202ENST00000418600 HLA-HP01893 362 aa15.16■□□□□ 0.02
SYNGAP1-202ENST00000418600 CA6P23280 308 aa15.16■□□□□ 0.02
SYNGAP1-202ENST00000418600 DLX5P56178 289 aa15.16■□□□□ 0.02
SYNGAP1-202ENST00000418600 ADAM5Q6NVV9 412 aa15.16■□□□□ 0.02
SYNGAP1-202ENST00000418600 RDH5Q92781 318 aa15.16■□□□□ 0.02
SYNGAP1-202ENST00000418600 SFXN3Q9BWM7 321 aa15.16■□□□□ 0.02
SYNGAP1-202ENST00000418600 LAMP3Q9UQV4 416 aa15.16■□□□□ 0.02
SYNGAP1-202ENST00000418600 ANXA7P20073 488 aaKnown RBP15.16■□□□□ 0.02
SYNGAP1-202ENST00000418600 B3GLCTQ6Y288 498 aa15.16■□□□□ 0.02
SYNGAP1-202ENST00000418600 OR6S1Q8NH40 331 aa15.16■□□□□ 0.02
SYNGAP1-202ENST00000418600 ZFAND2BQ8WV99 257 aa15.16■□□□□ 0.02
SYNGAP1-202ENST00000418600 SIAEQ9HAT2 523 aa15.16■□□□□ 0.02
SYNGAP1-202ENST00000418600 A0A0U1RQK1 487 aa15.16■□□□□ 0.02
SYNGAP1-202ENST00000418600 KIR2DS1A0A191URI9 304 aa15.16■□□□□ 0.02
SYNGAP1-202ENST00000418600 KIR2DS4P43632 304 aa15.16■□□□□ 0.02
SYNGAP1-202ENST00000418600 KIR2DS1Q14954 304 aa15.16■□□□□ 0.02
SYNGAP1-202ENST00000418600 TBR1Q16650 682 aa15.16■□□□□ 0.02
SYNGAP1-202ENST00000418600 OR5D13Q8NGL4 314 aa15.16■□□□□ 0.02
SYNGAP1-202ENST00000418600 TREM2Q9NZC2 230 aa15.16■□□□□ 0.02
SYNGAP1-202ENST00000418600 LOC107986453A0A1B0GWG9 222 aa15.16■□□□□ 0.02
SYNGAP1-202ENST00000418600 C19orf67A6NJJ6 358 aa15.16■□□□□ 0.02
SYNGAP1-202ENST00000418600 ACOD1A6NK06 481 aa15.16■□□□□ 0.02
SYNGAP1-202ENST00000418600 NME2P1O60361 137 aa15.16■□□□□ 0.02
SYNGAP1-202ENST00000418600 GOSR1O95249 250 aa15.16■□□□□ 0.02
SYNGAP1-202ENST00000418600 NME2P22392 152 aa15.16■□□□□ 0.02
SYNGAP1-202ENST00000418600 ZNF674Q2M3X9 581 aa15.16■□□□□ 0.02
SYNGAP1-202ENST00000418600 CTU2Q2VPK5 515 aaKnown RBP15.16■□□□□ 0.02
SYNGAP1-202ENST00000418600 UBE2NLQ5JXB2 153 aa15.16■□□□□ 0.02
SYNGAP1-202ENST00000418600 PLXDC2Q6UX71 529 aa15.16■□□□□ 0.02
SYNGAP1-202ENST00000418600 SUMF2Q8NBJ7 301 aa15.16■□□□□ 0.02
SYNGAP1-202ENST00000418600 TMEM106AQ96A25 262 aa15.16■□□□□ 0.02
SYNGAP1-202ENST00000418600 PERPQ96FX8 193 aa15.16■□□□□ 0.02
SYNGAP1-202ENST00000418600 RNF115Q9Y4L5 304 aa15.16■□□□□ 0.02
SYNGAP1-202ENST00000418600 SLCO1B1Q9Y6L6 691 aa15.16■□□□□ 0.02
SYNGAP1-202ENST00000418600 ZNFX1Q9P2E3 1918 aaKnown RBP15.16■□□□□ 0.02
SYNGAP1-202ENST00000418600 F6UZH7 168 aa15.16■□□□□ 0.02
SYNGAP1-202ENST00000418600 K7EQM0 130 aa15.16■□□□□ 0.02
SYNGAP1-202ENST00000418600 SPI1P17947 270 aa15.16■□□□□ 0.02
SYNGAP1-202ENST00000418600 TPBGQ13641 420 aa15.16■□□□□ 0.02
SYNGAP1-202ENST00000418600 YIF1BQ5BJH7 314 aa15.16■□□□□ 0.02
SYNGAP1-202ENST00000418600 Q8IYB0 196 aa15.16■□□□□ 0.02
SYNGAP1-202ENST00000418600 BBS1Q8NFJ9 593 aa15.16■□□□□ 0.02
SYNGAP1-202ENST00000418600 PPP1R3CQ9UQK1 317 aa15.16■□□□□ 0.02
SYNGAP1-202ENST00000418600 TNK1Q13470 666 aa15.15■□□□□ 0.02
SYNGAP1-202ENST00000418600 CD276Q5ZPR3 534 aa15.15■□□□□ 0.02
SYNGAP1-202ENST00000418600 OR52W1Q6IF63 320 aa15.15■□□□□ 0.02
SYNGAP1-202ENST00000418600 LRRC56Q8IYG6 542 aaPredicted RBP15.15■□□□□ 0.02
SYNGAP1-202ENST00000418600 WNT2BQ93097 391 aa15.15■□□□□ 0.02
SYNGAP1-202ENST00000418600 ASCL1P50553 236 aa15.15■□□□□ 0.02
SYNGAP1-202ENST00000418600 ZNF121P58317 390 aaPredicted RBP15.15■□□□□ 0.02
SYNGAP1-202ENST00000418600 MFGE8Q08431 387 aaPredicted RBP15.15■□□□□ 0.02
SYNGAP1-202ENST00000418600 MUC20Q8N307 709 aaPredicted RBP15.15■□□□□ 0.02
SYNGAP1-202ENST00000418600 PLPPR2Q96GM1 343 aa15.15■□□□□ 0.02
SYNGAP1-202ENST00000418600 GPATCH2Q9NW75 528 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms