RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 OR4M2Q8NGB6 313 aa12.92□□□□□ -0.34
NUP50-204ENST00000417702 OR6N2Q8NGY6 317 aa12.92□□□□□ -0.34
NUP50-204ENST00000417702 NRBF2Q96F24 287 aa12.92□□□□□ -0.34
NUP50-204ENST00000417702 PLEKHA8Q96JA3 519 aa12.92□□□□□ -0.34
NUP50-204ENST00000417702 SLC22A4Q9H015 551 aa12.92□□□□□ -0.34
NUP50-204ENST00000417702 OR51V1Q9H2C8 321 aa12.92□□□□□ -0.34
NUP50-204ENST00000417702 KIF17Q9P2E2 1029 aa12.92□□□□□ -0.34
NUP50-204ENST00000417702 METRNQ9UJH8 293 aa12.92□□□□□ -0.34
NUP50-204ENST00000417702 NOP16Q9Y3C1 178 aaKnown RBP12.92□□□□□ -0.34
NUP50-204ENST00000417702 N6AMT1Q9Y5N5 214 aa12.92□□□□□ -0.34
NUP50-204ENST00000417702 TANC2Q9HCD6 1990 aa12.92□□□□□ -0.34
NUP50-204ENST00000417702 GGT3PA6NGU5 568 aa12.91□□□□□ -0.34
NUP50-204ENST00000417702 LRRC30A6NM36 301 aa12.91□□□□□ -0.34
NUP50-204ENST00000417702 CD300LBA8K4G0 201 aa12.91□□□□□ -0.34
NUP50-204ENST00000417702 F5H5P2 479 aa12.91□□□□□ -0.34
NUP50-204ENST00000417702 TMEM178BH3BS89 294 aa12.91□□□□□ -0.34
NUP50-204ENST00000417702 MLNRO43193 412 aa12.91□□□□□ -0.34
NUP50-204ENST00000417702 FOXH1O75593 365 aa12.91□□□□□ -0.34
NUP50-204ENST00000417702 HLA-DPB1P04440 258 aa12.91□□□□□ -0.34
NUP50-204ENST00000417702 PSKH1P11801 424 aa12.91□□□□□ -0.34
NUP50-204ENST00000417702 MDH2P40926 338 aaKnown RBP12.91□□□□□ -0.34
NUP50-204ENST00000417702 GABPB1Q06547 395 aaPredicted RBP12.91□□□□□ -0.34
NUP50-204ENST00000417702 HNRNPA0Q13151 305 aaKnown RBP12.91□□□□□ -0.34
NUP50-204ENST00000417702 SCGB2A2Q13296 93 aa12.91□□□□□ -0.34
NUP50-204ENST00000417702 ATP6AP1Q15904 470 aa12.91□□□□□ -0.34
NUP50-204ENST00000417702 SNAI3Q3KNW1 292 aa12.91□□□□□ -0.34
NUP50-204ENST00000417702 DCAF12L2Q5VW00 463 aa12.91□□□□□ -0.34
NUP50-204ENST00000417702 LIPNQ5VXI9 398 aa12.91□□□□□ -0.34
NUP50-204ENST00000417702 PLBD1Q6P4A8 553 aa12.91□□□□□ -0.34
NUP50-204ENST00000417702 SPATC1Q76KD6 591 aa12.91□□□□□ -0.34
NUP50-204ENST00000417702 SHFQ7M4L6 423 aa12.91□□□□□ -0.34
NUP50-204ENST00000417702 DPY19L4Q7Z388 723 aa12.91□□□□□ -0.34
NUP50-204ENST00000417702 LRRC28Q86X40 367 aaPredicted RBP12.91□□□□□ -0.34
NUP50-204ENST00000417702 MUC20Q8N307 709 aaPredicted RBP12.91□□□□□ -0.34
NUP50-204ENST00000417702 RFLNBQ8N5W9 214 aa12.91□□□□□ -0.34
NUP50-204ENST00000417702 DNAJC9Q8WXX5 260 aa12.91□□□□□ -0.34
NUP50-204ENST00000417702 TOR3AQ9H497 397 aa12.91□□□□□ -0.34
NUP50-204ENST00000417702 METTL17Q9H7H0 456 aaPredicted RBP12.91□□□□□ -0.34
NUP50-204ENST00000417702 SP140LQ9H930 580 aa12.91□□□□□ -0.34
NUP50-204ENST00000417702 G6PC2Q9NQR9 355 aa12.91□□□□□ -0.34
NUP50-204ENST00000417702 IGHV3-64DA0A0J9YX35 117 aa12.9□□□□□ -0.34
NUP50-204ENST00000417702 J3QLI3 93 aa12.9□□□□□ -0.34
NUP50-204ENST00000417702 APOC1P02654 83 aa12.9□□□□□ -0.34
NUP50-204ENST00000417702 SLC2A1P11166 492 aa12.9□□□□□ -0.34
NUP50-204ENST00000417702 IRF2P14316 349 aa12.9□□□□□ -0.34
NUP50-204ENST00000417702 GATA3P23771 443 aa12.9□□□□□ -0.34
NUP50-204ENST00000417702 HSD11B1P28845 292 aa12.9□□□□□ -0.34
NUP50-204ENST00000417702 LCN2P80188 198 aa12.9□□□□□ -0.34
NUP50-204ENST00000417702 CDK5Q00535 292 aa12.9□□□□□ -0.34
NUP50-204ENST00000417702 ZNF92Q03936 586 aa12.9□□□□□ -0.34
NUP50-204ENST00000417702 KPNB1Q14974 876 aaKnown RBP12.9□□□□□ -0.34
NUP50-204ENST00000417702 ZMYND11Q15326 602 aa12.9□□□□□ -0.34
NUP50-204ENST00000417702 KLHL12Q53G59 568 aa12.9□□□□□ -0.34
NUP50-204ENST00000417702 GLYATL3Q5SZD4 288 aa12.9□□□□□ -0.34
NUP50-204ENST00000417702 MOGAT3Q86VF5 341 aa12.9□□□□□ -0.34
NUP50-204ENST00000417702 C1orf87Q8N0U7 546 aa12.9□□□□□ -0.34
NUP50-204ENST00000417702 CELF2-AS1Q8N7Q2 184 aa12.9□□□□□ -0.34
NUP50-204ENST00000417702 OR2AE1Q8NHA4 323 aa12.9□□□□□ -0.34
NUP50-204ENST00000417702 OR5K1Q8NHB7 308 aa12.9□□□□□ -0.34
NUP50-204ENST00000417702 ZNF420Q8TAQ5 688 aaPredicted RBP12.9□□□□□ -0.34
NUP50-204ENST00000417702 SIGLEC11Q96RL6 698 aa12.9□□□□□ -0.34
NUP50-204ENST00000417702 ABHD6Q9BV23 337 aa12.9□□□□□ -0.34
NUP50-204ENST00000417702 REPIN1Q9BWE0 567 aaKnown RBP12.9□□□□□ -0.34
NUP50-204ENST00000417702 OPA3Q9H6K4 179 aa12.9□□□□□ -0.34
NUP50-204ENST00000417702 NTN4Q9HB63 628 aa12.9□□□□□ -0.34
NUP50-204ENST00000417702 PATZ1Q9HBE1 687 aaKnown RBP12.9□□□□□ -0.34
NUP50-204ENST00000417702 A0A1B0GWJ7 208 aa12.89□□□□□ -0.35
NUP50-204ENST00000417702 PRODHO43272 600 aa12.89□□□□□ -0.35
NUP50-204ENST00000417702 TBX1O43435 398 aa12.89□□□□□ -0.35
NUP50-204ENST00000417702 XRCC2O43543 280 aa12.89□□□□□ -0.35
NUP50-204ENST00000417702 TCF21O43680 179 aa12.89□□□□□ -0.35
NUP50-204ENST00000417702 ANXA2P07355 339 aaKnown RBP12.89□□□□□ -0.35
NUP50-204ENST00000417702 CX3CR1P49238 355 aa12.89□□□□□ -0.35
NUP50-204ENST00000417702 RPS7P62081 194 aaKnown RBP12.89□□□□□ -0.35
NUP50-204ENST00000417702 OR8G1Q15617 311 aa12.89□□□□□ -0.35
NUP50-204ENST00000417702 ZNF181Q2M3W8 571 aa12.89□□□□□ -0.35
NUP50-204ENST00000417702 ZFP1Q6P2D0 407 aa12.89□□□□□ -0.35
NUP50-204ENST00000417702 CPOQ8IVL8 374 aa12.89□□□□□ -0.35
NUP50-204ENST00000417702 TIGD4Q8IY51 512 aa12.89□□□□□ -0.35
NUP50-204ENST00000417702 OR11L1Q8NGX0 322 aa12.89□□□□□ -0.35
NUP50-204ENST00000417702 RNF133Q8WVZ7 376 aa12.89□□□□□ -0.35
NUP50-204ENST00000417702 ERGIC1Q969X5 290 aa12.89□□□□□ -0.35
NUP50-204ENST00000417702 ZMYND19Q96E35 227 aaPredicted RBP12.89□□□□□ -0.35
NUP50-204ENST00000417702 OCEL1Q9H607 264 aa12.89□□□□□ -0.35
NUP50-204ENST00000417702 MARCH7Q9H992 704 aa12.89□□□□□ -0.35
NUP50-204ENST00000417702 SLC25A19Q9HC21 320 aa12.89□□□□□ -0.35
NUP50-204ENST00000417702 PAPOLBQ9NRJ5 636 aaKnown RBP12.89□□□□□ -0.35
NUP50-204ENST00000417702 ARHGAP32A7KAX9 2087 aa12.89□□□□□ -0.35
NUP50-204ENST00000417702 STAB1Q9NY15 2570 aa12.88□□□□□ -0.35
NUP50-204ENST00000417702 GMDSO60547 372 aa12.88□□□□□ -0.35
NUP50-204ENST00000417702 CYB5R3P00387 301 aaPredicted RBP12.88□□□□□ -0.35
NUP50-204ENST00000417702 CA6P23280 308 aa12.88□□□□□ -0.35
NUP50-204ENST00000417702 RBMXP38159 391 aaKnown RBP12.88□□□□□ -0.35
NUP50-204ENST00000417702 CD200P41217 278 aa12.88□□□□□ -0.35
NUP50-204ENST00000417702 GATA4P43694 442 aa12.88□□□□□ -0.35
NUP50-204ENST00000417702 SNAPC1Q16533 368 aa12.88□□□□□ -0.35
NUP50-204ENST00000417702 SLC35D3Q5M8T2 416 aa12.88□□□□□ -0.35
NUP50-204ENST00000417702 RHOUQ7L0Q8 258 aa12.88□□□□□ -0.35
NUP50-204ENST00000417702 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.88□□□□□ -0.35
NUP50-204ENST00000417702 ZNF454Q8N9F8 522 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms