RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 ZMAT1Q5H9K5 638 aa7.3□□□□□ -1.24
TRIM48-201ENST00000417545 GLYATL3Q5SZD4 288 aa7.3□□□□□ -1.24
TRIM48-201ENST00000417545 RPL22L1Q6P5R6 122 aaKnown RBP7.3□□□□□ -1.24
TRIM48-201ENST00000417545 ZNF367Q7RTV3 350 aa7.3□□□□□ -1.24
TRIM48-201ENST00000417545 NAA40Q86UY6 237 aa7.3□□□□□ -1.24
TRIM48-201ENST00000417545 EGFL6Q8IUX8 553 aa7.3□□□□□ -1.24
TRIM48-201ENST00000417545 FTMTQ8N4E7 242 aa7.3□□□□□ -1.24
TRIM48-201ENST00000417545 NANOGP1Q8N7R0 232 aa7.3□□□□□ -1.24
TRIM48-201ENST00000417545 OR5AK2Q8NH90 309 aa7.3□□□□□ -1.24
TRIM48-201ENST00000417545 OR2AE1Q8NHA4 323 aa7.3□□□□□ -1.24
TRIM48-201ENST00000417545 SGCDQ92629 289 aa7.3□□□□□ -1.24
TRIM48-201ENST00000417545 RORBQ92753 470 aa7.3□□□□□ -1.24
TRIM48-201ENST00000417545 UFD1Q92890 307 aa7.3□□□□□ -1.24
TRIM48-201ENST00000417545 FAM71F1Q96KD3 344 aaPredicted RBP7.3□□□□□ -1.24
TRIM48-201ENST00000417545 SIGLEC11Q96RL6 698 aa7.3□□□□□ -1.24
TRIM48-201ENST00000417545 DHRS9Q9BPW9 319 aa7.3□□□□□ -1.24
TRIM48-201ENST00000417545 SYT3Q9BQG1 590 aa7.3□□□□□ -1.24
TRIM48-201ENST00000417545 OR2J1Q9GZK6 312 aa7.3□□□□□ -1.24
TRIM48-201ENST00000417545 PLK3Q9H4B4 646 aa7.3□□□□□ -1.24
TRIM48-201ENST00000417545 RGCCQ9H4X1 137 aa7.3□□□□□ -1.24
TRIM48-201ENST00000417545 ZNF442Q9H7R0 627 aa7.3□□□□□ -1.24
TRIM48-201ENST00000417545 FAM206AQ9NX38 181 aa7.3□□□□□ -1.24
TRIM48-201ENST00000417545 BABAM2Q9NXR7 383 aa7.3□□□□□ -1.24
TRIM48-201ENST00000417545 NUFIP1Q9UHK0 495 aaKnown RBP7.3□□□□□ -1.24
TRIM48-201ENST00000417545 ZNF391Q9UJN7 358 aa7.3□□□□□ -1.24
TRIM48-201ENST00000417545 FZR1Q9UM11 496 aa7.3□□□□□ -1.24
TRIM48-201ENST00000417545 STARD10Q9Y365 291 aa7.3□□□□□ -1.24
TRIM48-201ENST00000417545 MAGEA13PA6NCF6 341 aa7.29□□□□□ -1.24
TRIM48-201ENST00000417545 TMEM212A6NML5 194 aa7.29□□□□□ -1.24
TRIM48-201ENST00000417545 SHISA9B4DS77 424 aa7.29□□□□□ -1.24
TRIM48-201ENST00000417545 H3BSA7 217 aa7.29□□□□□ -1.24
TRIM48-201ENST00000417545 H3BSH0 61 aa7.29□□□□□ -1.24
TRIM48-201ENST00000417545 P2RY10O00398 339 aa7.29□□□□□ -1.24
TRIM48-201ENST00000417545 HS3ST1O14792 307 aa7.29□□□□□ -1.24
TRIM48-201ENST00000417545 SIAH2O43255 324 aa7.29□□□□□ -1.24
TRIM48-201ENST00000417545 TPD52L2O43399 206 aaKnown RBP7.29□□□□□ -1.24
TRIM48-201ENST00000417545 SYT7O43581 403 aa7.29□□□□□ -1.24
TRIM48-201ENST00000417545 ERCC1P07992 297 aaPredicted RBP7.29□□□□□ -1.24
TRIM48-201ENST00000417545 OR4A8P0C604 315 aa7.29□□□□□ -1.24
TRIM48-201ENST00000417545 ZNF20P17024 532 aa7.29□□□□□ -1.24
TRIM48-201ENST00000417545 GNALP38405 381 aa7.29□□□□□ -1.24
TRIM48-201ENST00000417545 TGM4P49221 684 aa7.29□□□□□ -1.24
TRIM48-201ENST00000417545 ERVS71-1P61550 626 aa7.29□□□□□ -1.24
TRIM48-201ENST00000417545 HGFACQ04756 655 aa7.29□□□□□ -1.24
TRIM48-201ENST00000417545 SLC3A1Q07837 685 aa7.29□□□□□ -1.24
TRIM48-201ENST00000417545 SNAI3Q3KNW1 292 aa7.29□□□□□ -1.24
TRIM48-201ENST00000417545 CCDC58Q4VC31 144 aa7.29□□□□□ -1.24
TRIM48-201ENST00000417545 WDR38Q5JTN6 314 aa7.29□□□□□ -1.24
TRIM48-201ENST00000417545 TMEM244Q5VVB8 128 aa7.29□□□□□ -1.24
TRIM48-201ENST00000417545 AGAP6Q5VW22 663 aa7.29□□□□□ -1.24
TRIM48-201ENST00000417545 RNLSQ5VYX0 342 aa7.29□□□□□ -1.24
TRIM48-201ENST00000417545 CATSPERDQ86XM0 798 aa7.29□□□□□ -1.24
TRIM48-201ENST00000417545 MUC15Q8N387 334 aa7.29□□□□□ -1.24
TRIM48-201ENST00000417545 ZFP41Q8N8Y5 198 aa7.29□□□□□ -1.24
TRIM48-201ENST00000417545 OR13C3Q8NGS6 347 aa7.29□□□□□ -1.24
TRIM48-201ENST00000417545 OR2G2Q8NGZ5 317 aa7.29□□□□□ -1.24
TRIM48-201ENST00000417545 OR51E1Q8TCB6 317 aa7.29□□□□□ -1.24
TRIM48-201ENST00000417545 NEUROG1Q92886 237 aa7.29□□□□□ -1.24
TRIM48-201ENST00000417545 CMBLQ96DG6 245 aa7.29□□□□□ -1.24
TRIM48-201ENST00000417545 C14orf79Q96F83 325 aa7.29□□□□□ -1.24
TRIM48-201ENST00000417545 ZNF696Q9H7X3 374 aa7.29□□□□□ -1.24
TRIM48-201ENST00000417545 GPR84Q9NQS5 396 aa7.29□□□□□ -1.24
TRIM48-201ENST00000417545 SLC22A13Q9Y226 551 aa7.29□□□□□ -1.24
TRIM48-201ENST00000417545 SPTBN1Q01082 2364 aaKnown RBP7.29□□□□□ -1.24
TRIM48-201ENST00000417545 RELNP78509 3460 aa7.29□□□□□ -1.24
TRIM48-201ENST00000417545 A0A0U1RQV5 110 aa7.28□□□□□ -1.24
TRIM48-201ENST00000417545 LOC107986453A0A1B0GWG9 222 aa7.28□□□□□ -1.24
TRIM48-201ENST00000417545 ANKRD30BLA7E2S9 258 aa7.28□□□□□ -1.24
TRIM48-201ENST00000417545 E7EQL1 145 aa7.28□□□□□ -1.24
TRIM48-201ENST00000417545 ICMTO60725 284 aa7.28□□□□□ -1.24
TRIM48-201ENST00000417545 CTAG2O75638 210 aa7.28□□□□□ -1.24
TRIM48-201ENST00000417545 PNPP00491 289 aa7.28□□□□□ -1.24
TRIM48-201ENST00000417545 RAC2P15153 192 aa7.28□□□□□ -1.24
TRIM48-201ENST00000417545 CELP19835 753 aa7.28□□□□□ -1.24
TRIM48-201ENST00000417545 SERPINF1P36955 418 aa7.28□□□□□ -1.24
TRIM48-201ENST00000417545 MAP2K3P46734 347 aa7.28□□□□□ -1.24
TRIM48-201ENST00000417545 CCR9P51686 369 aa7.28□□□□□ -1.24
TRIM48-201ENST00000417545 GTF2A1P52655 376 aaPredicted RBP7.28□□□□□ -1.24
TRIM48-201ENST00000417545 NKX6-1P78426 367 aaPredicted RBP7.28□□□□□ -1.24
TRIM48-201ENST00000417545 BDH1Q02338 343 aa7.28□□□□□ -1.24
TRIM48-201ENST00000417545 GK2Q14410 553 aaPredicted RBP7.28□□□□□ -1.24
TRIM48-201ENST00000417545 HLXQ14774 488 aaPredicted RBP7.28□□□□□ -1.24
TRIM48-201ENST00000417545 CDK5R1Q15078 307 aa7.28□□□□□ -1.24
TRIM48-201ENST00000417545 ALKBH6Q3KRA9 238 aa7.28□□□□□ -1.24
TRIM48-201ENST00000417545 KRTAP27-1Q3LI81 207 aa7.28□□□□□ -1.24
TRIM48-201ENST00000417545 ZNF684Q5T5D7 378 aa7.28□□□□□ -1.24
TRIM48-201ENST00000417545 C20orf204Q6ZNR8 217 aa7.28□□□□□ -1.24
TRIM48-201ENST00000417545 KCTD8Q6ZWB6 473 aa7.28□□□□□ -1.24
TRIM48-201ENST00000417545 DOK3Q7L591 496 aa7.28□□□□□ -1.24
TRIM48-201ENST00000417545 ELMOD2Q8IZ81 293 aa7.28□□□□□ -1.24
TRIM48-201ENST00000417545 SPARTQ8N0X7 666 aa7.28□□□□□ -1.24
TRIM48-201ENST00000417545 OR5AS1Q8N127 324 aa7.28□□□□□ -1.24
TRIM48-201ENST00000417545 BHLHE23Q8NDY6 225 aa7.28□□□□□ -1.24
TRIM48-201ENST00000417545 CCDC54Q8NEL0 328 aa7.28□□□□□ -1.24
TRIM48-201ENST00000417545 CSNK2A3Q8NEV1 391 aa7.28□□□□□ -1.24
TRIM48-201ENST00000417545 SEMA6DQ8NFY4 1073 aa7.28□□□□□ -1.24
TRIM48-201ENST00000417545 KLF14Q8TD94 323 aaPredicted RBP7.28□□□□□ -1.24
TRIM48-201ENST00000417545 TMEM171Q8WVE6 324 aa7.28□□□□□ -1.24
TRIM48-201ENST00000417545 MRPL24Q96A35 216 aaKnown RBP7.28□□□□□ -1.24
TRIM48-201ENST00000417545 TMEM204Q9BSN7 226 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms