RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 FAM57BQ71RH2 274 aa19.69■□□□□ 0.74
SMARCB1-205ENST00000417137 OR8G5Q8NG78 346 aa19.69■□□□□ 0.74
SMARCB1-205ENST00000417137 OR10H4Q8NGA5 316 aa19.69■□□□□ 0.74
SMARCB1-205ENST00000417137 RNFT2Q96EX2 444 aa19.69■□□□□ 0.74
SMARCB1-205ENST00000417137 PGAM5Q96HS1 289 aa19.69■□□□□ 0.74
SMARCB1-205ENST00000417137 EGLN1Q9GZT9 426 aa19.69■□□□□ 0.74
SMARCB1-205ENST00000417137 VCX3BQ9H321 246 aa19.69■□□□□ 0.74
SMARCB1-205ENST00000417137 MSL2Q9HCI7 577 aa19.69■□□□□ 0.74
SMARCB1-205ENST00000417137 BRD7Q9NPI1 651 aa19.69■□□□□ 0.74
SMARCB1-205ENST00000417137 IQCF6A8MYZ5 107 aa19.68■□□□□ 0.74
SMARCB1-205ENST00000417137 H0YAE9 185 aa19.68■□□□□ 0.74
SMARCB1-205ENST00000417137 NDUFS8O00217 210 aa19.68■□□□□ 0.74
SMARCB1-205ENST00000417137 ADH4P08319 380 aa19.68■□□□□ 0.74
SMARCB1-205ENST00000417137 CCL8P80075 99 aa19.68■□□□□ 0.74
SMARCB1-205ENST00000417137 MRPS11P82912 194 aaKnown RBP19.68■□□□□ 0.74
SMARCB1-205ENST00000417137 ZNF92Q03936 586 aa19.68■□□□□ 0.74
SMARCB1-205ENST00000417137 CDK5R2Q13319 367 aa19.68■□□□□ 0.74
SMARCB1-205ENST00000417137 TNK1Q13470 666 aa19.68■□□□□ 0.74
SMARCB1-205ENST00000417137 CARTPTQ16568 116 aa19.68■□□□□ 0.74
SMARCB1-205ENST00000417137 TIGD6Q17RP2 521 aa19.68■□□□□ 0.74
SMARCB1-205ENST00000417137 GLYATL3Q5SZD4 288 aa19.68■□□□□ 0.74
SMARCB1-205ENST00000417137 OR5AS1Q8N127 324 aa19.68■□□□□ 0.74
SMARCB1-205ENST00000417137 ZNF786Q8N393 782 aa19.68■□□□□ 0.74
SMARCB1-205ENST00000417137 ZNF540Q8NDQ6 660 aa19.68■□□□□ 0.74
SMARCB1-205ENST00000417137 OR13G1Q8NGZ3 307 aa19.68■□□□□ 0.74
SMARCB1-205ENST00000417137 SPRYD4Q8WW59 207 aaPredicted RBP19.68■□□□□ 0.74
SMARCB1-205ENST00000417137 RDH5Q92781 318 aa19.68■□□□□ 0.74
SMARCB1-205ENST00000417137 REPIN1Q9BWE0 567 aaKnown RBP19.68■□□□□ 0.74
SMARCB1-205ENST00000417137 RGCCQ9H4X1 137 aa19.68■□□□□ 0.74
SMARCB1-205ENST00000417137 RPL36Q9Y3U8 105 aaKnown RBP19.68■□□□□ 0.74
SMARCB1-205ENST00000417137 TMEM269A0A1B0GVZ9 245 aa19.67■□□□□ 0.74
SMARCB1-205ENST00000417137 GGT3PA6NGU5 568 aa19.67■□□□□ 0.74
SMARCB1-205ENST00000417137 ZSCAN5BA6NJL1 495 aa19.67■□□□□ 0.74
SMARCB1-205ENST00000417137 PSMD9O00233 223 aa19.67■□□□□ 0.74
SMARCB1-205ENST00000417137 IGHV1-46P01743 117 aa19.67■□□□□ 0.74
SMARCB1-205ENST00000417137 CAPGP40121 348 aa19.67■□□□□ 0.74
SMARCB1-205ENST00000417137 MAGEB1P43366 347 aa19.67■□□□□ 0.74
SMARCB1-205ENST00000417137 PSMA6P60900 246 aaKnown RBP19.67■□□□□ 0.74
SMARCB1-205ENST00000417137 ACTC1P68032 377 aa19.67■□□□□ 0.74
SMARCB1-205ENST00000417137 ACTA1P68133 377 aa19.67■□□□□ 0.74
SMARCB1-205ENST00000417137 ADARB1P78563 741 aaKnown RBP19.67■□□□□ 0.74
SMARCB1-205ENST00000417137 TSTQ16762 297 aaKnown RBP19.67■□□□□ 0.74
SMARCB1-205ENST00000417137 ZNF829Q3KNS6 432 aaPredicted RBP19.67■□□□□ 0.74
SMARCB1-205ENST00000417137 ZNF691Q5VV52 312 aa19.67■□□□□ 0.74
SMARCB1-205ENST00000417137 PRSS45Q7RTY3 260 aa19.67■□□□□ 0.74
SMARCB1-205ENST00000417137 OR2AE1Q8NHA4 323 aa19.67■□□□□ 0.74
SMARCB1-205ENST00000417137 GTF3AQ92664 365 aaKnown RBP19.67■□□□□ 0.74
SMARCB1-205ENST00000417137 SPSB4Q96A44 273 aa19.67■□□□□ 0.74
SMARCB1-205ENST00000417137 MYCBPQ99417 103 aaPredicted RBP19.67■□□□□ 0.74
SMARCB1-205ENST00000417137 TBX5Q99593 518 aa19.67■□□□□ 0.74
SMARCB1-205ENST00000417137 ADI1Q9BV57 179 aa19.67■□□□□ 0.74
SMARCB1-205ENST00000417137 TMUB1Q9BVT8 246 aa19.67■□□□□ 0.74
SMARCB1-205ENST00000417137 TMEM100Q9NV29 134 aa19.67■□□□□ 0.74
SMARCB1-205ENST00000417137 AASSQ9UDR5 926 aa19.67■□□□□ 0.74
SMARCB1-205ENST00000417137 AKAP9Q99996 3911 aa19.66■□□□□ 0.74
SMARCB1-205ENST00000417137 A0A1W2PQL4 384 aaPredicted RBP19.66■□□□□ 0.74
SMARCB1-205ENST00000417137 TRIM64A6NGJ6 449 aa19.66■□□□□ 0.74
SMARCB1-205ENST00000417137 TRIM64BA6NI03 449 aa19.66■□□□□ 0.74
SMARCB1-205ENST00000417137 H0YJX3 145 aa19.66■□□□□ 0.74
SMARCB1-205ENST00000417137 APOL3O95236 402 aa19.66■□□□□ 0.74
SMARCB1-205ENST00000417137 HPXP02790 462 aa19.66■□□□□ 0.74
SMARCB1-205ENST00000417137 KRT8P05787 483 aa19.66■□□□□ 0.74
SMARCB1-205ENST00000417137 FOSL1P15407 271 aa19.66■□□□□ 0.74
SMARCB1-205ENST00000417137 SLC25A16P16260 332 aa19.66■□□□□ 0.74
SMARCB1-205ENST00000417137 DDOSTP39656 456 aa19.66■□□□□ 0.74
SMARCB1-205ENST00000417137 RIPK1Q13546 671 aa19.66■□□□□ 0.74
SMARCB1-205ENST00000417137 OR2Z1Q8NG97 314 aa19.66■□□□□ 0.74
SMARCB1-205ENST00000417137 C10orf105Q8TEF2 133 aa19.66■□□□□ 0.74
SMARCB1-205ENST00000417137 SGK3Q96BR1 496 aa19.66■□□□□ 0.74
SMARCB1-205ENST00000417137 REEP6Q96HR9 211 aa19.66■□□□□ 0.74
SMARCB1-205ENST00000417137 PIMREGQ9BSJ6 248 aa19.66■□□□□ 0.74
SMARCB1-205ENST00000417137 TTTY10Q9BZA0 68 aa19.66■□□□□ 0.74
SMARCB1-205ENST00000417137 SLC22A4Q9H015 551 aa19.66■□□□□ 0.74
SMARCB1-205ENST00000417137 SAP30LQ9HAJ7 183 aa19.66■□□□□ 0.74
SMARCB1-205ENST00000417137 ZNF391Q9UJN7 358 aa19.66■□□□□ 0.74
SMARCB1-205ENST00000417137 HSPE1-MOB4S4R3N1 261 aa19.66■□□□□ 0.74
SMARCB1-205ENST00000417137 CD300LBA8K4G0 201 aa19.65■□□□□ 0.74
SMARCB1-205ENST00000417137 CD55P08174 381 aa19.65■□□□□ 0.74
SMARCB1-205ENST00000417137 MMP16P51512 607 aa19.65■□□□□ 0.74
SMARCB1-205ENST00000417137 TNFAIP6P98066 277 aaPredicted RBP19.65■□□□□ 0.74
SMARCB1-205ENST00000417137 KRTAP21-3Q3LHN1 58 aa19.65■□□□□ 0.74
SMARCB1-205ENST00000417137 PLEKHG7Q6ZR37 379 aa19.65■□□□□ 0.74
SMARCB1-205ENST00000417137 BHLHE23Q8NDY6 225 aa19.65■□□□□ 0.74
SMARCB1-205ENST00000417137 ELMOD3Q96FG2 381 aa19.65■□□□□ 0.74
SMARCB1-205ENST00000417137 MRPL48Q96GC5 212 aaKnown RBP19.65■□□□□ 0.74
SMARCB1-205ENST00000417137 SLC30A2Q9BRI3 323 aa19.65■□□□□ 0.74
SMARCB1-205ENST00000417137 REG4Q9BYZ8 158 aa19.65■□□□□ 0.74
SMARCB1-205ENST00000417137 DLL4Q9NR61 685 aa19.65■□□□□ 0.74
SMARCB1-205ENST00000417137 EXOGQ9Y2C4 368 aaKnown RBP19.65■□□□□ 0.74
SMARCB1-205ENST00000417137 NOP16Q9Y3C1 178 aaKnown RBP19.65■□□□□ 0.74
SMARCB1-205ENST00000417137 DAPL1A0PJW8 107 aa19.64■□□□□ 0.73
SMARCB1-205ENST00000417137 C5orf63A6NC05 138 aa19.64■□□□□ 0.73
SMARCB1-205ENST00000417137 METTL15A6NJ78 407 aa19.64■□□□□ 0.73
SMARCB1-205ENST00000417137 H7C1Q1 480 aa19.64■□□□□ 0.73
SMARCB1-205ENST00000417137 SULT1C4O75897 302 aa19.64■□□□□ 0.73
SMARCB1-205ENST00000417137 CLIC3O95833 236 aa19.64■□□□□ 0.73
SMARCB1-205ENST00000417137 FADS2O95864 444 aaKnown RBP19.64■□□□□ 0.73
SMARCB1-205ENST00000417137 DBTP11182 482 aaKnown RBP19.64■□□□□ 0.73
SMARCB1-205ENST00000417137 ZNF91Q05481 1191 aa19.64■□□□□ 0.73
SMARCB1-205ENST00000417137 RAB40BQ12829 278 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms