RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 A0A0X1KG70 313 aa13.15□□□□□ -0.3
ITGB1-204ENST00000417122 C5orf63A6NC05 138 aa13.15□□□□□ -0.3
ITGB1-204ENST00000417122 CD300LBA8K4G0 201 aa13.15□□□□□ -0.3
ITGB1-204ENST00000417122 PRR23D1E9PI22 279 aaPredicted RBP13.15□□□□□ -0.3
ITGB1-204ENST00000417122 TIPRLO75663 272 aa13.15□□□□□ -0.3
ITGB1-204ENST00000417122 ATP5HO75947 161 aa13.15□□□□□ -0.3
ITGB1-204ENST00000417122 PRR23D2P0DMB1 279 aaPredicted RBP13.15□□□□□ -0.3
ITGB1-204ENST00000417122 SLC2A1P11166 492 aa13.15□□□□□ -0.3
ITGB1-204ENST00000417122 SLC15A1P46059 708 aa13.15□□□□□ -0.3
ITGB1-204ENST00000417122 GRB2P62993 217 aaKnown RBP13.15□□□□□ -0.3
ITGB1-204ENST00000417122 LCN2P80188 198 aa13.15□□□□□ -0.3
ITGB1-204ENST00000417122 SRSF2Q01130 221 aaKnown RBP13.15□□□□□ -0.3
ITGB1-204ENST00000417122 ZMYND11Q15326 602 aa13.15□□□□□ -0.3
ITGB1-204ENST00000417122 GLYATL3Q5SZD4 288 aa13.15□□□□□ -0.3
ITGB1-204ENST00000417122 PLBD1Q6P4A8 553 aa13.15□□□□□ -0.3
ITGB1-204ENST00000417122 SHQ1Q6PI26 577 aaKnown RBP13.15□□□□□ -0.3
ITGB1-204ENST00000417122 SHFQ7M4L6 423 aa13.15□□□□□ -0.3
ITGB1-204ENST00000417122 MOGAT3Q86VF5 341 aa13.15□□□□□ -0.3
ITGB1-204ENST00000417122 RFLNBQ8N5W9 214 aa13.15□□□□□ -0.3
ITGB1-204ENST00000417122 OR4M2Q8NGB6 313 aa13.15□□□□□ -0.3
ITGB1-204ENST00000417122 NRBF2Q96F24 287 aa13.15□□□□□ -0.3
ITGB1-204ENST00000417122 ABHD6Q9BV23 337 aa13.15□□□□□ -0.3
ITGB1-204ENST00000417122 REPIN1Q9BWE0 567 aaKnown RBP13.15□□□□□ -0.3
ITGB1-204ENST00000417122 METTL17Q9H7H0 456 aaPredicted RBP13.15□□□□□ -0.3
ITGB1-204ENST00000417122 NTN4Q9HB63 628 aa13.15□□□□□ -0.3
ITGB1-204ENST00000417122 PATZ1Q9HBE1 687 aaKnown RBP13.15□□□□□ -0.3
ITGB1-204ENST00000417122 N6AMT1Q9Y5N5 214 aa13.15□□□□□ -0.3
ITGB1-204ENST00000417122 DNHD1Q96M86 4753 aa13.15□□□□□ -0.31
ITGB1-204ENST00000417122 GGT3PA6NGU5 568 aa13.14□□□□□ -0.31
ITGB1-204ENST00000417122 J3QLI3 93 aa13.14□□□□□ -0.31
ITGB1-204ENST00000417122 FOXH1O75593 365 aa13.14□□□□□ -0.31
ITGB1-204ENST00000417122 CYB5R3P00387 301 aaPredicted RBP13.14□□□□□ -0.31
ITGB1-204ENST00000417122 AVPP01185 164 aa13.14□□□□□ -0.31
ITGB1-204ENST00000417122 HSD11B1P28845 292 aa13.14□□□□□ -0.31
ITGB1-204ENST00000417122 MDH2P40926 338 aaKnown RBP13.14□□□□□ -0.31
ITGB1-204ENST00000417122 CD200P41217 278 aa13.14□□□□□ -0.31
ITGB1-204ENST00000417122 RAD23AP54725 363 aa13.14□□□□□ -0.31
ITGB1-204ENST00000417122 MAB21L1Q13394 359 aa13.14□□□□□ -0.31
ITGB1-204ENST00000417122 ZNF181Q2M3W8 571 aa13.14□□□□□ -0.31
ITGB1-204ENST00000417122 KRTAP24-1Q3LI83 254 aa13.14□□□□□ -0.31
ITGB1-204ENST00000417122 DCAF12L2Q5VW00 463 aa13.14□□□□□ -0.31
ITGB1-204ENST00000417122 LIPNQ5VXI9 398 aa13.14□□□□□ -0.31
ITGB1-204ENST00000417122 C1orf229Q6ZS94 237 aaPredicted RBP13.14□□□□□ -0.31
ITGB1-204ENST00000417122 TIGD4Q8IY51 512 aa13.14□□□□□ -0.31
ITGB1-204ENST00000417122 MUC20Q8N307 709 aaPredicted RBP13.14□□□□□ -0.31
ITGB1-204ENST00000417122 TEX29Q8N6K0 151 aa13.14□□□□□ -0.31
ITGB1-204ENST00000417122 CELF2-AS1Q8N7Q2 184 aa13.14□□□□□ -0.31
ITGB1-204ENST00000417122 RNF133Q8WVZ7 376 aa13.14□□□□□ -0.31
ITGB1-204ENST00000417122 ZMYND19Q96E35 227 aaPredicted RBP13.14□□□□□ -0.31
ITGB1-204ENST00000417122 TEX12Q9BXU0 123 aa13.14□□□□□ -0.31
ITGB1-204ENST00000417122 TMPRSS13Q9BYE2 586 aa13.14□□□□□ -0.31
ITGB1-204ENST00000417122 SLC22A4Q9H015 551 aa13.14□□□□□ -0.31
ITGB1-204ENST00000417122 TOR3AQ9H497 397 aa13.14□□□□□ -0.31
ITGB1-204ENST00000417122 KIF17Q9P2E2 1029 aa13.14□□□□□ -0.31
ITGB1-204ENST00000417122 NOP16Q9Y3C1 178 aaKnown RBP13.14□□□□□ -0.31
ITGB1-204ENST00000417122 LRRC30A6NM36 301 aa13.13□□□□□ -0.31
ITGB1-204ENST00000417122 XRCC2O43543 280 aa13.13□□□□□ -0.31
ITGB1-204ENST00000417122 TCF21O43680 179 aa13.13□□□□□ -0.31
ITGB1-204ENST00000417122 ZNF205O95201 554 aa13.13□□□□□ -0.31
ITGB1-204ENST00000417122 ANXA2P07355 339 aaKnown RBP13.13□□□□□ -0.31
ITGB1-204ENST00000417122 CA6P23280 308 aa13.13□□□□□ -0.31
ITGB1-204ENST00000417122 GATA3P23771 443 aa13.13□□□□□ -0.31
ITGB1-204ENST00000417122 ZFP36P26651 326 aaKnown RBP13.13□□□□□ -0.31
ITGB1-204ENST00000417122 GATA4P43694 442 aa13.13□□□□□ -0.31
ITGB1-204ENST00000417122 CX3CR1P49238 355 aa13.13□□□□□ -0.31
ITGB1-204ENST00000417122 OR8G1Q15617 311 aa13.13□□□□□ -0.31
ITGB1-204ENST00000417122 KLHL12Q53G59 568 aa13.13□□□□□ -0.31
ITGB1-204ENST00000417122 TMEM236Q5W0B7 351 aa13.13□□□□□ -0.31
ITGB1-204ENST00000417122 CPOQ8IVL8 374 aa13.13□□□□□ -0.31
ITGB1-204ENST00000417122 C1orf87Q8N0U7 546 aa13.13□□□□□ -0.31
ITGB1-204ENST00000417122 DNAJC9Q8WXX5 260 aa13.13□□□□□ -0.31
ITGB1-204ENST00000417122 ERGIC1Q969X5 290 aa13.13□□□□□ -0.31
ITGB1-204ENST00000417122 UTP4Q969X6 686 aaKnown RBP13.13□□□□□ -0.31
ITGB1-204ENST00000417122 PLEKHA8Q96JA3 519 aa13.13□□□□□ -0.31
ITGB1-204ENST00000417122 MMADHCQ9H3L0 296 aaPredicted RBP13.13□□□□□ -0.31
ITGB1-204ENST00000417122 OPA3Q9H6K4 179 aa13.13□□□□□ -0.31
ITGB1-204ENST00000417122 SLC25A19Q9HC21 320 aa13.13□□□□□ -0.31
ITGB1-204ENST00000417122 PAPOLBQ9NRJ5 636 aaKnown RBP13.13□□□□□ -0.31
ITGB1-204ENST00000417122 ARHGAP32A7KAX9 2087 aa13.12□□□□□ -0.31
ITGB1-204ENST00000417122 PPIAL4EA0A075B759 164 aa13.12□□□□□ -0.31
ITGB1-204ENST00000417122 LOC105371242A0A075B767 164 aa13.12□□□□□ -0.31
ITGB1-204ENST00000417122 PPIAL4CA0A0B4J2A2 164 aa13.12□□□□□ -0.31
ITGB1-204ENST00000417122 CEACAM18A8MTB9 384 aa13.12□□□□□ -0.31
ITGB1-204ENST00000417122 F5H0A9 414 aaPredicted RBP13.12□□□□□ -0.31
ITGB1-204ENST00000417122 PPIAL4DF5H284 164 aa13.12□□□□□ -0.31
ITGB1-204ENST00000417122 PRODHO43272 600 aa13.12□□□□□ -0.31
ITGB1-204ENST00000417122 TBX1O43435 398 aa13.12□□□□□ -0.31
ITGB1-204ENST00000417122 GMDSO60547 372 aa13.12□□□□□ -0.31
ITGB1-204ENST00000417122 SELENOFO60613 162 aa13.12□□□□□ -0.31
ITGB1-204ENST00000417122 APOC1P02654 83 aa13.12□□□□□ -0.31
ITGB1-204ENST00000417122 PPIAL4FP0DN26 164 aa13.12□□□□□ -0.31
ITGB1-204ENST00000417122 IRF2P14316 349 aa13.12□□□□□ -0.31
ITGB1-204ENST00000417122 PMELP40967 661 aa13.12□□□□□ -0.31
ITGB1-204ENST00000417122 DAPP51397 102 aa13.12□□□□□ -0.31
ITGB1-204ENST00000417122 CRISP1P54107 249 aa13.12□□□□□ -0.31
ITGB1-204ENST00000417122 SEC61A1P61619 476 aaKnown RBP13.12□□□□□ -0.31
ITGB1-204ENST00000417122 SCGB2A2Q13296 93 aa13.12□□□□□ -0.31
ITGB1-204ENST00000417122 PRAMEF6Q5VXH4 476 aa13.12□□□□□ -0.31
ITGB1-204ENST00000417122 RHOUQ7L0Q8 258 aa13.12□□□□□ -0.31
ITGB1-204ENST00000417122 OR5K1Q8NHB7 308 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms