RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 ZNF446Q9NWS9 450 aa12.02□□□□□ -0.49
PAF1-202ENST00000416728 KIF17Q9P2E2 1029 aa12.02□□□□□ -0.49
PAF1-202ENST00000416728 RNF7Q9UBF6 113 aa12.02□□□□□ -0.49
PAF1-202ENST00000416728 KCNG2Q9UJ96 466 aa12.02□□□□□ -0.49
PAF1-202ENST00000416728 CD300LBA8K4G0 201 aa12.01□□□□□ -0.49
PAF1-202ENST00000416728 SEMG1P04279 462 aa12.01□□□□□ -0.49
PAF1-202ENST00000416728 OMGP23515 440 aa12.01□□□□□ -0.49
PAF1-202ENST00000416728 SLC35F1Q5T1Q4 408 aa12.01□□□□□ -0.49
PAF1-202ENST00000416728 ZNF620Q6ZNG0 422 aa12.01□□□□□ -0.49
PAF1-202ENST00000416728 BOLLQ8N9W6 283 aaKnown RBP12.01□□□□□ -0.49
PAF1-202ENST00000416728 MAP6Q96JE9 813 aa12.01□□□□□ -0.49
PAF1-202ENST00000416728 PCGF1Q9BSM1 259 aa12.01□□□□□ -0.49
PAF1-202ENST00000416728 ADAT1Q9BUB4 502 aaKnown RBP12.01□□□□□ -0.49
PAF1-202ENST00000416728 MYLK2Q9H1R3 596 aa12.01□□□□□ -0.49
PAF1-202ENST00000416728 PRDM13Q9H4Q3 707 aa12.01□□□□□ -0.49
PAF1-202ENST00000416728 MRPL22Q9NWU5 206 aaKnown RBP12.01□□□□□ -0.49
PAF1-202ENST00000416728 ERVK-18Q9QC07 812 aa12.01□□□□□ -0.49
PAF1-202ENST00000416728 MAGEL2Q9UJ55 1249 aa12.01□□□□□ -0.49
PAF1-202ENST00000416728 GGT3PA6NGU5 568 aa12□□□□□ -0.49
PAF1-202ENST00000416728 SRRM5B3KS81 715 aa12□□□□□ -0.49
PAF1-202ENST00000416728 LGALS8O00214 317 aa12□□□□□ -0.49
PAF1-202ENST00000416728 GMDSO60547 372 aa12□□□□□ -0.49
PAF1-202ENST00000416728 CRYBA1P05813 215 aa12□□□□□ -0.49
PAF1-202ENST00000416728 PRDX6P30041 224 aa12□□□□□ -0.49
PAF1-202ENST00000416728 RRM2P31350 389 aa12□□□□□ -0.49
PAF1-202ENST00000416728 GSSP48637 474 aa12□□□□□ -0.49
PAF1-202ENST00000416728 KHDRBS1Q07666 443 aaKnown RBP eCLIP12□□□□□ -0.49
PAF1-202ENST00000416728 TSPAN31Q12999 210 aa12□□□□□ -0.49
PAF1-202ENST00000416728 CD276Q5ZPR3 534 aa12□□□□□ -0.49
PAF1-202ENST00000416728 SFRP4Q6FHJ7 346 aaPredicted RBP12□□□□□ -0.49
PAF1-202ENST00000416728 PROKR2Q8NFJ6 384 aa12□□□□□ -0.49
PAF1-202ENST00000416728 OR52L1Q8NGH7 329 aa12□□□□□ -0.49
PAF1-202ENST00000416728 GNPDA2Q8TDQ7 276 aa12□□□□□ -0.49
PAF1-202ENST00000416728 ELAC2Q9BQ52 826 aaKnown RBP12□□□□□ -0.49
PAF1-202ENST00000416728 NOX4Q9NPH5 578 aa12□□□□□ -0.49
PAF1-202ENST00000416728 TRIM36Q9NQ86 728 aa12□□□□□ -0.49
PAF1-202ENST00000416728 TNFRSF19Q9NS68 423 aa12□□□□□ -0.49
PAF1-202ENST00000416728 CTSZQ9UBR2 303 aa12□□□□□ -0.49
PAF1-202ENST00000416728 MMP24Q9Y5R2 645 aa12□□□□□ -0.49
PAF1-202ENST00000416728 MEGF8Q7Z7M0 2845 aa11.99□□□□□ -0.49
PAF1-202ENST00000416728 A0A1B0GUS0 222 aa11.99□□□□□ -0.49
PAF1-202ENST00000416728 FAM181BA6NEQ2 426 aa11.99□□□□□ -0.49
PAF1-202ENST00000416728 C3orf80F5H4A9 247 aa11.99□□□□□ -0.49
PAF1-202ENST00000416728 PTBP3O95758 552 aaKnown RBP11.99□□□□□ -0.49
PAF1-202ENST00000416728 KNG1P01042 644 aa11.99□□□□□ -0.49
PAF1-202ENST00000416728 FABP3P05413 133 aa11.99□□□□□ -0.49
PAF1-202ENST00000416728 LIPFP07098 398 aa11.99□□□□□ -0.49
PAF1-202ENST00000416728 SFTPBP07988 381 aa11.99□□□□□ -0.49
PAF1-202ENST00000416728 HSD17B1P14061 328 aa11.99□□□□□ -0.49
PAF1-202ENST00000416728 PYCR1P32322 319 aa11.99□□□□□ -0.49
PAF1-202ENST00000416728 CFHR2P36980 270 aa11.99□□□□□ -0.49
PAF1-202ENST00000416728 RPS27P42677 84 aaKnown RBP11.99□□□□□ -0.49
PAF1-202ENST00000416728 HOXA4Q00056 320 aaPredicted RBP11.99□□□□□ -0.49
PAF1-202ENST00000416728 ZNF92Q03936 586 aa11.99□□□□□ -0.49
PAF1-202ENST00000416728 OR8B8Q15620 311 aa11.99□□□□□ -0.49
PAF1-202ENST00000416728 SNAI3Q3KNW1 292 aa11.99□□□□□ -0.49
PAF1-202ENST00000416728 ZNF362Q5T0B9 420 aaPredicted RBP11.99□□□□□ -0.49
PAF1-202ENST00000416728 RUSC1-AS1Q66K80 236 aa11.99□□□□□ -0.49
PAF1-202ENST00000416728 DRAM2Q6UX65 266 aa11.99□□□□□ -0.49
PAF1-202ENST00000416728 CYB561A3Q8NBI2 242 aa11.99□□□□□ -0.49
PAF1-202ENST00000416728 PLPP7Q8NBV4 271 aa11.99□□□□□ -0.49
PAF1-202ENST00000416728 OR4C15Q8NGM1 316 aa11.99□□□□□ -0.49
PAF1-202ENST00000416728 OR2T4Q8NH00 348 aa11.99□□□□□ -0.49
PAF1-202ENST00000416728 OR2AE1Q8NHA4 323 aa11.99□□□□□ -0.49
PAF1-202ENST00000416728 NSMCE2Q96MF7 247 aa11.99□□□□□ -0.49
PAF1-202ENST00000416728 MARCH7Q9H992 704 aa11.99□□□□□ -0.49
PAF1-202ENST00000416728 TRAV38-1A0A0B4J264 116 aa11.98□□□□□ -0.49
PAF1-202ENST00000416728 TVP23AA6NH52 213 aa11.98□□□□□ -0.49
PAF1-202ENST00000416728 A6NLC8 198 aa11.98□□□□□ -0.49
PAF1-202ENST00000416728 ZNF879B4DU55 563 aa11.98□□□□□ -0.49
PAF1-202ENST00000416728 P2RY10O00398 339 aa11.98□□□□□ -0.49
PAF1-202ENST00000416728 ADAM20O43506 726 aa11.98□□□□□ -0.49
PAF1-202ENST00000416728 NDUFA2O43678 99 aa11.98□□□□□ -0.49
PAF1-202ENST00000416728 TOX4O94842 621 aa11.98□□□□□ -0.49
PAF1-202ENST00000416728 OTX1P32242 354 aaPredicted RBP11.98□□□□□ -0.49
PAF1-202ENST00000416728 RAG2P55895 527 aa11.98□□□□□ -0.49
PAF1-202ENST00000416728 GLYATL3Q5SZD4 288 aa11.98□□□□□ -0.49
PAF1-202ENST00000416728 RPL13AP3Q6NVV1 102 aa11.98□□□□□ -0.49
PAF1-202ENST00000416728 PGBD2Q6P3X8 592 aa11.98□□□□□ -0.49
PAF1-202ENST00000416728 FIP1L1Q6UN15 594 aaKnown RBP11.98□□□□□ -0.49
PAF1-202ENST00000416728 Q6YL49 198 aa11.98□□□□□ -0.49
PAF1-202ENST00000416728 SPERTQ8NA61 448 aa11.98□□□□□ -0.49
PAF1-202ENST00000416728 OR4F5Q8NH21 305 aa11.98□□□□□ -0.49
PAF1-202ENST00000416728 COPS4Q9BT78 406 aa11.98□□□□□ -0.49
PAF1-202ENST00000416728 EGLN3Q9H6Z9 239 aa11.98□□□□□ -0.49
PAF1-202ENST00000416728 BEX1Q9HBH7 125 aa11.98□□□□□ -0.49
PAF1-202ENST00000416728 IL1RAPQ9NPH3 570 aa11.98□□□□□ -0.49
PAF1-202ENST00000416728 MED4Q9NPJ6 270 aa11.98□□□□□ -0.49
PAF1-202ENST00000416728 C1orf123Q9NWV4 160 aa11.98□□□□□ -0.49
PAF1-202ENST00000416728 MRPL15Q9P015 296 aaKnown RBP11.98□□□□□ -0.49
PAF1-202ENST00000416728 CDH10Q9Y6N8 788 aa11.98□□□□□ -0.49
PAF1-202ENST00000416728 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.97□□□□□ -0.49
PAF1-202ENST00000416728 OOEPA6NGQ2 149 aa11.97□□□□□ -0.49
PAF1-202ENST00000416728 TNFRSF13BO14836 293 aaPredicted RBP11.97□□□□□ -0.49
PAF1-202ENST00000416728 ARPC2O15144 300 aa11.97□□□□□ -0.49
PAF1-202ENST00000416728 GRPP07492 148 aa11.97□□□□□ -0.49
PAF1-202ENST00000416728 MMP9P14780 707 aa11.97□□□□□ -0.49
PAF1-202ENST00000416728 MSX2P35548 267 aaPredicted RBP11.97□□□□□ -0.49
PAF1-202ENST00000416728 MZT1Q08AG7 82 aa11.97□□□□□ -0.49
PAF1-202ENST00000416728 SAMD4BQ5PRF9 694 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms