RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 ZNF275Q9NSD4 429 aaPredicted RBP15.3■□□□□ 0.04
SEMA3B-201ENST00000416295 WARS2Q9UGM6 360 aaKnown RBP15.3■□□□□ 0.04
SEMA3B-201ENST00000416295 KLHDC2Q9Y2U9 406 aa15.3■□□□□ 0.04
SEMA3B-201ENST00000416295 N6AMT1Q9Y5N5 214 aa15.3■□□□□ 0.04
SEMA3B-201ENST00000416295 HIVEP2P31629 2446 aa15.29■□□□□ 0.04
SEMA3B-201ENST00000416295 TACSTD2P09758 323 aa15.29■□□□□ 0.04
SEMA3B-201ENST00000416295 TNFRSF1AP19438 455 aa15.29■□□□□ 0.04
SEMA3B-201ENST00000416295 HTR1FP30939 366 aa15.29■□□□□ 0.04
SEMA3B-201ENST00000416295 GPR6P46095 362 aaPredicted RBP15.29■□□□□ 0.04
SEMA3B-201ENST00000416295 CHN2P52757 468 aa15.29■□□□□ 0.04
SEMA3B-201ENST00000416295 ZNF121P58317 390 aaPredicted RBP15.29■□□□□ 0.04
SEMA3B-201ENST00000416295 ZNF92Q03936 586 aa15.29■□□□□ 0.04
SEMA3B-201ENST00000416295 POU4F2Q12837 409 aa15.29■□□□□ 0.04
SEMA3B-201ENST00000416295 TMED1Q13445 227 aa15.29■□□□□ 0.04
SEMA3B-201ENST00000416295 HFEQ30201 348 aa15.29■□□□□ 0.04
SEMA3B-201ENST00000416295 ZIK1Q3SY52 487 aaPredicted RBP15.29■□□□□ 0.04
SEMA3B-201ENST00000416295 DEGS2Q6QHC5 323 aa15.29■□□□□ 0.04
SEMA3B-201ENST00000416295 LRRN1Q6UXK5 716 aa15.29■□□□□ 0.04
SEMA3B-201ENST00000416295 KRT77Q7Z794 578 aa15.29■□□□□ 0.04
SEMA3B-201ENST00000416295 BHLHE23Q8NDY6 225 aa15.29■□□□□ 0.04
SEMA3B-201ENST00000416295 SPRYD4Q8WW59 207 aaPredicted RBP15.29■□□□□ 0.04
SEMA3B-201ENST00000416295 SLC30A2Q9BRI3 323 aa15.29■□□□□ 0.04
SEMA3B-201ENST00000416295 ADGRL4Q9HBW9 690 aa15.29■□□□□ 0.04
SEMA3B-201ENST00000416295 DNAJC27Q9NZQ0 273 aa15.29■□□□□ 0.04
SEMA3B-201ENST00000416295 IL19Q9UHD0 177 aa15.29■□□□□ 0.04
SEMA3B-201ENST00000416295 NOP16Q9Y3C1 178 aaKnown RBP15.29■□□□□ 0.04
SEMA3B-201ENST00000416295 IGHV4-61A0A0C4DH41 118 aa15.28■□□□□ 0.04
SEMA3B-201ENST00000416295 GGT3PA6NGU5 568 aa15.28■□□□□ 0.04
SEMA3B-201ENST00000416295 PHYHO14832 338 aa15.28■□□□□ 0.04
SEMA3B-201ENST00000416295 TBX1O43435 398 aa15.28■□□□□ 0.04
SEMA3B-201ENST00000416295 PPIHO43447 177 aaKnown RBP15.28■□□□□ 0.04
SEMA3B-201ENST00000416295 CFL1P23528 166 aaKnown RBP15.28■□□□□ 0.04
SEMA3B-201ENST00000416295 HCCSP53701 268 aa15.28■□□□□ 0.04
SEMA3B-201ENST00000416295 PSMA6P60900 246 aaKnown RBP15.28■□□□□ 0.04
SEMA3B-201ENST00000416295 ROM1Q03395 351 aa15.28■□□□□ 0.04
SEMA3B-201ENST00000416295 SLC3A1Q07837 685 aa15.28■□□□□ 0.04
SEMA3B-201ENST00000416295 RCN1Q15293 331 aa15.28■□□□□ 0.04
SEMA3B-201ENST00000416295 TIGD6Q17RP2 521 aa15.28■□□□□ 0.04
SEMA3B-201ENST00000416295 FAM57BQ71RH2 274 aa15.28■□□□□ 0.04
SEMA3B-201ENST00000416295 OR2AE1Q8NHA4 323 aa15.28■□□□□ 0.04
SEMA3B-201ENST00000416295 SPSB4Q96A44 273 aa15.28■□□□□ 0.04
SEMA3B-201ENST00000416295 SLC29A1Q99808 456 aa15.28■□□□□ 0.04
SEMA3B-201ENST00000416295 REPIN1Q9BWE0 567 aaKnown RBP15.28■□□□□ 0.04
SEMA3B-201ENST00000416295 MROQ9BYG7 248 aa15.28■□□□□ 0.04
SEMA3B-201ENST00000416295 OR10A2Q9H208 303 aa15.28■□□□□ 0.04
SEMA3B-201ENST00000416295 TMEM100Q9NV29 134 aa15.28■□□□□ 0.04
SEMA3B-201ENST00000416295 LRP12Q9Y561 859 aa15.28■□□□□ 0.04
SEMA3B-201ENST00000416295 CSPG4Q6UVK1 2322 aa15.28■□□□□ 0.04
SEMA3B-201ENST00000416295 FN1P02751 2386 aaKnown RBP15.27■□□□□ 0.04
SEMA3B-201ENST00000416295 A0A1B0GWJ7 208 aa15.27■□□□□ 0.04
SEMA3B-201ENST00000416295 CD300LBA8K4G0 201 aa15.27■□□□□ 0.04
SEMA3B-201ENST00000416295 CLDN25C9JDP6 229 aa15.27■□□□□ 0.04
SEMA3B-201ENST00000416295 ANKRD65E5RJM6 399 aa15.27■□□□□ 0.04
SEMA3B-201ENST00000416295 E9PQ18 207 aa15.27■□□□□ 0.04
SEMA3B-201ENST00000416295 CD5LO43866 347 aa15.27■□□□□ 0.04
SEMA3B-201ENST00000416295 ZNF254O75437 659 aa15.27■□□□□ 0.04
SEMA3B-201ENST00000416295 SBK2P0C263 348 aa15.27■□□□□ 0.04
SEMA3B-201ENST00000416295 ANPEPP15144 967 aa15.27■□□□□ 0.04
SEMA3B-201ENST00000416295 PRSS12P56730 875 aa15.27■□□□□ 0.04
SEMA3B-201ENST00000416295 KRTAP1-1Q07627 177 aa15.27■□□□□ 0.04
SEMA3B-201ENST00000416295 PRSS45Q7RTY3 260 aa15.27■□□□□ 0.04
SEMA3B-201ENST00000416295 SLC35F2Q8IXU6 374 aa15.27■□□□□ 0.04
SEMA3B-201ENST00000416295 ZNF679Q8IYX0 411 aa15.27■□□□□ 0.04
SEMA3B-201ENST00000416295 OR10AD1Q8NGE0 317 aa15.27■□□□□ 0.04
SEMA3B-201ENST00000416295 OR51G2Q8NGK0 314 aa15.27■□□□□ 0.04
SEMA3B-201ENST00000416295 TIMD4Q96H15 378 aa15.27■□□□□ 0.04
SEMA3B-201ENST00000416295 PGAM5Q96HS1 289 aa15.27■□□□□ 0.04
SEMA3B-201ENST00000416295 RDH12Q96NR8 316 aa15.27■□□□□ 0.04
SEMA3B-201ENST00000416295 OR2V2Q96R30 315 aa15.27■□□□□ 0.04
SEMA3B-201ENST00000416295 MBOAT4Q96T53 435 aa15.27■□□□□ 0.04
SEMA3B-201ENST00000416295 SLC22A4Q9H015 551 aa15.27■□□□□ 0.04
SEMA3B-201ENST00000416295 RGCCQ9H4X1 137 aa15.27■□□□□ 0.04
SEMA3B-201ENST00000416295 C8orf4Q9NR00 106 aa15.27■□□□□ 0.04
SEMA3B-201ENST00000416295 CLN6Q9NWW5 311 aa15.27■□□□□ 0.04
SEMA3B-201ENST00000416295 GMPPBQ9Y5P6 360 aa15.27■□□□□ 0.04
SEMA3B-201ENST00000416295 C5orf63A6NC05 138 aa15.26■□□□□ 0.03
SEMA3B-201ENST00000416295 ZNF670-ZNF695F2Z2N8 137 aa15.26■□□□□ 0.03
SEMA3B-201ENST00000416295 LILRA1O75019 489 aa15.26■□□□□ 0.03
SEMA3B-201ENST00000416295 ANOS1P23352 680 aa15.26■□□□□ 0.03
SEMA3B-201ENST00000416295 DCTDP32321 178 aa15.26■□□□□ 0.03
SEMA3B-201ENST00000416295 DDOSTP39656 456 aa15.26■□□□□ 0.03
SEMA3B-201ENST00000416295 SRP9P49458 86 aaKnown RBP15.26■□□□□ 0.03
SEMA3B-201ENST00000416295 GZMKP49863 264 aa15.26■□□□□ 0.03
SEMA3B-201ENST00000416295 SNRPGP62308 76 aaKnown RBP15.26■□□□□ 0.03
SEMA3B-201ENST00000416295 TRIP10Q15642 601 aa15.26■□□□□ 0.03
SEMA3B-201ENST00000416295 SLC25A30Q5SVS4 291 aa15.26■□□□□ 0.03
SEMA3B-201ENST00000416295 MEDAGQ5VYS4 303 aa15.26■□□□□ 0.03
SEMA3B-201ENST00000416295 ITLN1Q8WWA0 313 aa15.26■□□□□ 0.03
SEMA3B-201ENST00000416295 CCL17Q92583 94 aa15.26■□□□□ 0.03
SEMA3B-201ENST00000416295 HPS1Q92902 700 aa15.26■□□□□ 0.03
SEMA3B-201ENST00000416295 REEP6Q96HR9 211 aa15.26■□□□□ 0.03
SEMA3B-201ENST00000416295 OR8B4Q96RC9 309 aa15.26■□□□□ 0.03
SEMA3B-201ENST00000416295 BRD7Q9NPI1 651 aa15.26■□□□□ 0.03
SEMA3B-201ENST00000416295 IKZF2Q9UKS7 526 aa15.26■□□□□ 0.03
SEMA3B-201ENST00000416295 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.26■□□□□ 0.03
SEMA3B-201ENST00000416295 COPS3Q9UNS2 423 aa15.26■□□□□ 0.03
SEMA3B-201ENST00000416295 CACNG2Q9Y698 323 aa15.26■□□□□ 0.03
SEMA3B-201ENST00000416295 CHD3Q12873 2000 aaKnown RBP15.26■□□□□ 0.03
SEMA3B-201ENST00000416295 ZANQ9Y493 2812 aa15.25■□□□□ 0.03
SEMA3B-201ENST00000416295 ACOD1A6NK06 481 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms