RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 BCL7BQ9BQE9 202 aa12.32□□□□□ -0.44
SF3B1-204ENST00000414963 RBM38Q9H0Z9 239 aaKnown RBP12.32□□□□□ -0.44
SF3B1-204ENST00000414963 ENPP5Q9UJA9 477 aa12.32□□□□□ -0.44
SF3B1-204ENST00000414963 STUB1Q9UNE7 303 aa12.32□□□□□ -0.44
SF3B1-204ENST00000414963 GTF2A1LQ9UNN4 478 aa12.32□□□□□ -0.44
SF3B1-204ENST00000414963 CEPT1Q9Y6K0 416 aa12.32□□□□□ -0.44
SF3B1-204ENST00000414963 TRBV5-5A0A0J9YX44 114 aa12.31□□□□□ -0.44
SF3B1-204ENST00000414963 LOC390937A0A1W2PQ73 354 aa12.31□□□□□ -0.44
SF3B1-204ENST00000414963 CLEC18AA5D8T8 446 aa12.31□□□□□ -0.44
SF3B1-204ENST00000414963 TUBAL3A6NHL2 446 aa12.31□□□□□ -0.44
SF3B1-204ENST00000414963 M0R1B8 84 aa12.31□□□□□ -0.44
SF3B1-204ENST00000414963 XRCC2O43543 280 aa12.31□□□□□ -0.44
SF3B1-204ENST00000414963 CCNOP22674 350 aa12.31□□□□□ -0.44
SF3B1-204ENST00000414963 GADD45AP24522 165 aa12.31□□□□□ -0.44
SF3B1-204ENST00000414963 CD40P25942 277 aa12.31□□□□□ -0.44
SF3B1-204ENST00000414963 FGF9P31371 208 aaPredicted RBP12.31□□□□□ -0.44
SF3B1-204ENST00000414963 UCP2P55851 309 aa12.31□□□□□ -0.44
SF3B1-204ENST00000414963 FABP5Q01469 135 aa12.31□□□□□ -0.44
SF3B1-204ENST00000414963 CLEC18BQ6UXF7 455 aa12.31□□□□□ -0.44
SF3B1-204ENST00000414963 UNQ6126/PRO20091Q6UXV3 157 aa12.31□□□□□ -0.44
SF3B1-204ENST00000414963 TMEM91Q6ZNR0 172 aa12.31□□□□□ -0.44
SF3B1-204ENST00000414963 SLC16A12Q6ZSM3 486 aa12.31□□□□□ -0.44
SF3B1-204ENST00000414963 WFDC8Q8IUA0 241 aa12.31□□□□□ -0.44
SF3B1-204ENST00000414963 RDH10Q8IZV5 341 aa12.31□□□□□ -0.44
SF3B1-204ENST00000414963 CLEC18CQ8NCF0 446 aa12.31□□□□□ -0.44
SF3B1-204ENST00000414963 OR5L1Q8NGL2 311 aa12.31□□□□□ -0.44
SF3B1-204ENST00000414963 ZNF420Q8TAQ5 688 aaPredicted RBP12.31□□□□□ -0.44
SF3B1-204ENST00000414963 OR51E1Q8TCB6 317 aa12.31□□□□□ -0.44
SF3B1-204ENST00000414963 GPR148Q8TDV2 347 aa12.31□□□□□ -0.44
SF3B1-204ENST00000414963 PHYHIPQ92561 330 aa12.31□□□□□ -0.44
SF3B1-204ENST00000414963 THRSPQ92748 146 aa12.31□□□□□ -0.44
SF3B1-204ENST00000414963 TMEM203Q969S6 136 aa12.31□□□□□ -0.44
SF3B1-204ENST00000414963 TMED9Q9BVK6 235 aa12.31□□□□□ -0.44
SF3B1-204ENST00000414963 HHLA2Q9UM44 414 aa12.31□□□□□ -0.44
SF3B1-204ENST00000414963 STARD10Q9Y365 291 aa12.31□□□□□ -0.44
SF3B1-204ENST00000414963 RELNP78509 3460 aa12.31□□□□□ -0.44
SF3B1-204ENST00000414963 DOPEY1Q5JWR5 2465 aa12.31□□□□□ -0.44
SF3B1-204ENST00000414963 RTTNQ86VV8 2226 aa12.3□□□□□ -0.44
SF3B1-204ENST00000414963 LOC107986453A0A1B0GWG9 222 aa12.3□□□□□ -0.44
SF3B1-204ENST00000414963 DPRXA6NFQ7 191 aa12.3□□□□□ -0.44
SF3B1-204ENST00000414963 ZNF701M0R085 212 aaPredicted RBP12.3□□□□□ -0.44
SF3B1-204ENST00000414963 P2RY10O00398 339 aa12.3□□□□□ -0.44
SF3B1-204ENST00000414963 SMPD2O60906 423 aa12.3□□□□□ -0.44
SF3B1-204ENST00000414963 GPX5O75715 221 aa12.3□□□□□ -0.44
SF3B1-204ENST00000414963 GATBO75879 557 aaKnown RBP12.3□□□□□ -0.44
SF3B1-204ENST00000414963 RGS9O75916 674 aaPredicted RBP12.3□□□□□ -0.44
SF3B1-204ENST00000414963 GABARAPO95166 117 aa12.3□□□□□ -0.44
SF3B1-204ENST00000414963 NGFP01138 241 aa12.3□□□□□ -0.44
SF3B1-204ENST00000414963 CRYAAP02489 173 aa12.3□□□□□ -0.44
SF3B1-204ENST00000414963 PLA2G2AP14555 144 aa12.3□□□□□ -0.44
SF3B1-204ENST00000414963 ZNF12P17014 697 aa12.3□□□□□ -0.44
SF3B1-204ENST00000414963 IGFBP2P18065 325 aa12.3□□□□□ -0.44
SF3B1-204ENST00000414963 CFL1P23528 166 aaKnown RBP12.3□□□□□ -0.44
SF3B1-204ENST00000414963 CALCRP30988 508 aa12.3□□□□□ -0.44
SF3B1-204ENST00000414963 RAD52P43351 418 aa12.3□□□□□ -0.44
SF3B1-204ENST00000414963 SRSF1Q07955 248 aaKnown RBP eCLIP12.3□□□□□ -0.44
SF3B1-204ENST00000414963 ACSM3Q53FZ2 586 aa12.3□□□□□ -0.44
SF3B1-204ENST00000414963 GLYATL3Q5SZD4 288 aa12.3□□□□□ -0.44
SF3B1-204ENST00000414963 PAMR1Q6UXH9 720 aa12.3□□□□□ -0.44
SF3B1-204ENST00000414963 DOK3Q7L591 496 aa12.3□□□□□ -0.44
SF3B1-204ENST00000414963 CLVS1Q8IUQ0 354 aaPredicted RBP12.3□□□□□ -0.44
SF3B1-204ENST00000414963 ZNF101Q8IZC7 436 aa12.3□□□□□ -0.44
SF3B1-204ENST00000414963 ACBD4Q8NC06 268 aa12.3□□□□□ -0.44
SF3B1-204ENST00000414963 LINC01560Q8TB33 94 aa12.3□□□□□ -0.44
SF3B1-204ENST00000414963 AKAP1Q92667 903 aaKnown RBP eCLIP12.3□□□□□ -0.44
SF3B1-204ENST00000414963 LYZL4Q96KX0 146 aa12.3□□□□□ -0.44
SF3B1-204ENST00000414963 FAM192AQ9GZU8 254 aa12.3□□□□□ -0.44
SF3B1-204ENST00000414963 OR51E2Q9H255 320 aa12.3□□□□□ -0.44
SF3B1-204ENST00000414963 OPA3Q9H6K4 179 aa12.3□□□□□ -0.44
SF3B1-204ENST00000414963 SLC24A3Q9HC58 644 aa12.3□□□□□ -0.44
SF3B1-204ENST00000414963 GPR84Q9NQS5 396 aa12.3□□□□□ -0.44
SF3B1-204ENST00000414963 SSR3Q9UNL2 185 aa12.3□□□□□ -0.44
SF3B1-204ENST00000414963 N6AMT1Q9Y5N5 214 aa12.3□□□□□ -0.44
SF3B1-204ENST00000414963 KLF2Q9Y5W3 355 aaPredicted RBP12.3□□□□□ -0.44
SF3B1-204ENST00000414963 USP9XQ93008 2570 aaPredicted RBP12.29□□□□□ -0.44
SF3B1-204ENST00000414963 TRBV5-7A0A0A0MS05 114 aa12.29□□□□□ -0.44
SF3B1-204ENST00000414963 A0A1B0GVI7 797 aa12.29□□□□□ -0.44
SF3B1-204ENST00000414963 DHRS7CA6NNS2 312 aa12.29□□□□□ -0.44
SF3B1-204ENST00000414963 ZNF879B4DU55 563 aa12.29□□□□□ -0.44
SF3B1-204ENST00000414963 GABRPO00591 440 aa12.29□□□□□ -0.44
SF3B1-204ENST00000414963 TBX1O43435 398 aa12.29□□□□□ -0.44
SF3B1-204ENST00000414963 SYT7O43581 403 aa12.29□□□□□ -0.44
SF3B1-204ENST00000414963 AIREO43918 545 aa12.29□□□□□ -0.44
SF3B1-204ENST00000414963 RAF1P04049 648 aa12.29□□□□□ -0.44
SF3B1-204ENST00000414963 NR4A1P22736 598 aa12.29□□□□□ -0.44
SF3B1-204ENST00000414963 MALLQ13021 153 aa12.29□□□□□ -0.44
SF3B1-204ENST00000414963 CTF1Q16619 201 aa12.29□□□□□ -0.44
SF3B1-204ENST00000414963 Q499Y3 187 aa12.29□□□□□ -0.44
SF3B1-204ENST00000414963 ALKBH2Q6NS38 261 aa12.29□□□□□ -0.44
SF3B1-204ENST00000414963 RFPL4BQ6ZWI9 263 aa12.29□□□□□ -0.44
SF3B1-204ENST00000414963 OR10AC1Q8NH08 325 aa12.29□□□□□ -0.44
SF3B1-204ENST00000414963 RAB2BQ8WUD1 216 aa12.29□□□□□ -0.44
SF3B1-204ENST00000414963 DGCR14Q96DF8 476 aaKnown RBP12.29□□□□□ -0.44
SF3B1-204ENST00000414963 ZC3HAV1LQ96H79 300 aaKnown RBP12.29□□□□□ -0.44
SF3B1-204ENST00000414963 REEP6Q96HR9 211 aa12.29□□□□□ -0.44
SF3B1-204ENST00000414963 KCNS3Q9BQ31 491 aa12.29□□□□□ -0.44
SF3B1-204ENST00000414963 REPIN1Q9BWE0 567 aaKnown RBP12.29□□□□□ -0.44
SF3B1-204ENST00000414963 BCL2L14Q9BZR8 327 aa12.29□□□□□ -0.44
SF3B1-204ENST00000414963 NAA50Q9GZZ1 169 aaKnown RBP12.29□□□□□ -0.44
SF3B1-204ENST00000414963 ESRP2Q9H6T0 727 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms