RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 ATP6AP1Q15904 470 aa9.47□□□□□ -0.89
RFFL-204ENST00000414419 SNAPC1Q16533 368 aa9.47□□□□□ -0.89
RFFL-204ENST00000414419 SNAI3Q3KNW1 292 aa9.47□□□□□ -0.89
RFFL-204ENST00000414419 TMEM236Q5W0B7 351 aa9.47□□□□□ -0.89
RFFL-204ENST00000414419 FAHD2BQ6P2I3 314 aaPredicted RBP9.47□□□□□ -0.89
RFFL-204ENST00000414419 CPOQ8IVL8 374 aa9.47□□□□□ -0.89
RFFL-204ENST00000414419 KLHL36Q8N4N3 616 aa9.47□□□□□ -0.89
RFFL-204ENST00000414419 SPICQ8N5J4 248 aa9.47□□□□□ -0.89
RFFL-204ENST00000414419 THEM6Q8WUY1 208 aa9.47□□□□□ -0.89
RFFL-204ENST00000414419 UTP4Q969X6 686 aaKnown RBP9.47□□□□□ -0.89
RFFL-204ENST00000414419 ZMYND19Q96E35 227 aaPredicted RBP9.47□□□□□ -0.89
RFFL-204ENST00000414419 FAHD2AQ96GK7 314 aa9.47□□□□□ -0.89
RFFL-204ENST00000414419 MEGF10Q96KG7 1140 aa9.47□□□□□ -0.89
RFFL-204ENST00000414419 ABHD6Q9BV23 337 aa9.47□□□□□ -0.89
RFFL-204ENST00000414419 SLC22A4Q9H015 551 aa9.47□□□□□ -0.89
RFFL-204ENST00000414419 NTN4Q9HB63 628 aa9.47□□□□□ -0.89
RFFL-204ENST00000414419 SLC25A19Q9HC21 320 aa9.47□□□□□ -0.89
RFFL-204ENST00000414419 GCM1Q9NP62 436 aa9.47□□□□□ -0.89
RFFL-204ENST00000414419 KRT84Q9NSB2 600 aa9.47□□□□□ -0.89
RFFL-204ENST00000414419 TVP23BQ9NYZ1 205 aa9.47□□□□□ -0.89
RFFL-204ENST00000414419 ANK3Q12955 4377 aaKnown RBP9.46□□□□□ -0.89
RFFL-204ENST00000414419 ATRQ13535 2644 aa9.46□□□□□ -0.89
RFFL-204ENST00000414419 CD300LBA8K4G0 201 aa9.46□□□□□ -0.9
RFFL-204ENST00000414419 H0YL77 283 aa9.46□□□□□ -0.9
RFFL-204ENST00000414419 MLNRO43193 412 aa9.46□□□□□ -0.9
RFFL-204ENST00000414419 HLA-DPB1P04440 258 aa9.46□□□□□ -0.9
RFFL-204ENST00000414419 LYNP07948 512 aa9.46□□□□□ -0.9
RFFL-204ENST00000414419 H2BFMP0C1H6 154 aa9.46□□□□□ -0.9
RFFL-204ENST00000414419 SLC2A1P11166 492 aa9.46□□□□□ -0.9
RFFL-204ENST00000414419 PSKH1P11801 424 aa9.46□□□□□ -0.9
RFFL-204ENST00000414419 IRF2P14316 349 aa9.46□□□□□ -0.9
RFFL-204ENST00000414419 DAPP51397 102 aa9.46□□□□□ -0.9
RFFL-204ENST00000414419 BTG1P62324 171 aa9.46□□□□□ -0.9
RFFL-204ENST00000414419 ESRRGP62508 458 aa9.46□□□□□ -0.9
RFFL-204ENST00000414419 OR8G1Q15617 311 aa9.46□□□□□ -0.9
RFFL-204ENST00000414419 TIGD6Q17RP2 521 aa9.46□□□□□ -0.9
RFFL-204ENST00000414419 SLC35D3Q5M8T2 416 aa9.46□□□□□ -0.9
RFFL-204ENST00000414419 GLYATL3Q5SZD4 288 aa9.46□□□□□ -0.9
RFFL-204ENST00000414419 FAHD1Q6P587 224 aa9.46□□□□□ -0.9
RFFL-204ENST00000414419 CCDC121Q6ZUS5 278 aa9.46□□□□□ -0.9
RFFL-204ENST00000414419 RHOUQ7L0Q8 258 aa9.46□□□□□ -0.9
RFFL-204ENST00000414419 CXXC5Q7LFL8 322 aaKnown RBP9.46□□□□□ -0.9
RFFL-204ENST00000414419 ZDHHC13Q8IUH4 622 aa9.46□□□□□ -0.9
RFFL-204ENST00000414419 C1orf87Q8N0U7 546 aa9.46□□□□□ -0.9
RFFL-204ENST00000414419 MUC20Q8N307 709 aaPredicted RBP9.46□□□□□ -0.9
RFFL-204ENST00000414419 ZNF454Q8N9F8 522 aa9.46□□□□□ -0.9
RFFL-204ENST00000414419 OR2AE1Q8NHA4 323 aa9.46□□□□□ -0.9
RFFL-204ENST00000414419 REPIN1Q9BWE0 567 aaKnown RBP9.46□□□□□ -0.9
RFFL-204ENST00000414419 OPA3Q9H6K4 179 aa9.46□□□□□ -0.9
RFFL-204ENST00000414419 MARCH7Q9H992 704 aa9.46□□□□□ -0.9
RFFL-204ENST00000414419 ENOPH1Q9UHY7 261 aa9.46□□□□□ -0.9
RFFL-204ENST00000414419 A0A0G2JMP0 313 aa9.45□□□□□ -0.9
RFFL-204ENST00000414419 IGHV3-64DA0A0J9YX35 117 aa9.45□□□□□ -0.9
RFFL-204ENST00000414419 A0A0X1KG70 313 aa9.45□□□□□ -0.9
RFFL-204ENST00000414419 TMEM178BH3BS89 294 aa9.45□□□□□ -0.9
RFFL-204ENST00000414419 PLPP2O43688 288 aa9.45□□□□□ -0.9
RFFL-204ENST00000414419 GMDSO60547 372 aa9.45□□□□□ -0.9
RFFL-204ENST00000414419 SELENOFO60613 162 aa9.45□□□□□ -0.9
RFFL-204ENST00000414419 PNPP00491 289 aa9.45□□□□□ -0.9
RFFL-204ENST00000414419 IGHV2-70P01814 119 aa9.45□□□□□ -0.9
RFFL-204ENST00000414419 CA6P23280 308 aa9.45□□□□□ -0.9
RFFL-204ENST00000414419 MDH2P40926 338 aaKnown RBP9.45□□□□□ -0.9
RFFL-204ENST00000414419 MMP16P51512 607 aa9.45□□□□□ -0.9
RFFL-204ENST00000414419 ZNF92Q03936 586 aa9.45□□□□□ -0.9
RFFL-204ENST00000414419 MZT1Q08AG7 82 aa9.45□□□□□ -0.9
RFFL-204ENST00000414419 SCGB2A2Q13296 93 aa9.45□□□□□ -0.9
RFFL-204ENST00000414419 APOFQ13790 326 aa9.45□□□□□ -0.9
RFFL-204ENST00000414419 PTGES3Q15185 160 aaKnown RBP9.45□□□□□ -0.9
RFFL-204ENST00000414419 TMEM155Q4W5P6 130 aa9.45□□□□□ -0.9
RFFL-204ENST00000414419 LCN1P1Q5VSP4 162 aa9.45□□□□□ -0.9
RFFL-204ENST00000414419 DCAF12L2Q5VW00 463 aa9.45□□□□□ -0.9
RFFL-204ENST00000414419 AMIGO2Q86SJ2 522 aa9.45□□□□□ -0.9
RFFL-204ENST00000414419 MOGAT3Q86VF5 341 aa9.45□□□□□ -0.9
RFFL-204ENST00000414419 LRRC28Q86X40 367 aaPredicted RBP9.45□□□□□ -0.9
RFFL-204ENST00000414419 TIGD4Q8IY51 512 aa9.45□□□□□ -0.9
RFFL-204ENST00000414419 PARP8Q8N3A8 854 aa9.45□□□□□ -0.9
RFFL-204ENST00000414419 TEX29Q8N6K0 151 aa9.45□□□□□ -0.9
RFFL-204ENST00000414419 CELF2-AS1Q8N7Q2 184 aa9.45□□□□□ -0.9
RFFL-204ENST00000414419 OR4M2Q8NGB6 313 aa9.45□□□□□ -0.9
RFFL-204ENST00000414419 OR52H1Q8NGJ2 320 aa9.45□□□□□ -0.9
RFFL-204ENST00000414419 OR11L1Q8NGX0 322 aa9.45□□□□□ -0.9
RFFL-204ENST00000414419 OTOSQ8NHW6 89 aa9.45□□□□□ -0.9
RFFL-204ENST00000414419 ZNF420Q8TAQ5 688 aaPredicted RBP9.45□□□□□ -0.9
RFFL-204ENST00000414419 RNF133Q8WVZ7 376 aa9.45□□□□□ -0.9
RFFL-204ENST00000414419 ERGIC1Q969X5 290 aa9.45□□□□□ -0.9
RFFL-204ENST00000414419 BRD7Q9NPI1 651 aa9.45□□□□□ -0.9
RFFL-204ENST00000414419 DCAF16Q9NXF7 216 aa9.45□□□□□ -0.9
RFFL-204ENST00000414419 DNAJC27Q9NZQ0 273 aa9.45□□□□□ -0.9
RFFL-204ENST00000414419 MRPL15Q9P015 296 aaKnown RBP9.45□□□□□ -0.9
RFFL-204ENST00000414419 H2AFY2Q9P0M6 372 aaPredicted RBP9.45□□□□□ -0.9
RFFL-204ENST00000414419 LAMP5Q9UJQ1 280 aa9.45□□□□□ -0.9
RFFL-204ENST00000414419 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.44□□□□□ -0.9
RFFL-204ENST00000414419 ANKRD30BLA7E2S9 258 aa9.44□□□□□ -0.9
RFFL-204ENST00000414419 RNF212BA8MTL3 300 aa9.44□□□□□ -0.9
RFFL-204ENST00000414419 FOXH1O75593 365 aa9.44□□□□□ -0.9
RFFL-204ENST00000414419 CYB5R3P00387 301 aaPredicted RBP9.44□□□□□ -0.9
RFFL-204ENST00000414419 CFL1P23528 166 aaKnown RBP9.44□□□□□ -0.9
RFFL-204ENST00000414419 THBS2P35442 1172 aa9.44□□□□□ -0.9
RFFL-204ENST00000414419 DDOSTP39656 456 aa9.44□□□□□ -0.9
RFFL-204ENST00000414419 NAA10P41227 235 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms