RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 LCN9Q8WX39 176 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 HIST1H2ACQ93077 130 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 AJUBAQ96IF1 538 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 SLC46A1Q96NT5 459 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 CMKLR1Q99788 373 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 GSDMCQ9BYG8 508 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 CHIAQ9BZP6 476 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 PIPOXQ9P0Z9 390 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 SLC45A2Q9UMX9 530 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 HEATR5BQ9P2D3 2071 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 OR2M5A3KFT3 312 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 REM1O75628 298 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 CBX7O95931 251 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 MT-ND4P03905 459 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 RPN2P04844 631 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 IL5P05113 134 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 ERGP11308 486 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 EIF2S3P41091 472 aaKnown RBP8.37□□□□□ -1.07
SNHG3-201ENST00000413987 TNP2Q05952 138 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 TCEAL6Q6IPX3 200 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 NR2C2APQ86WQ0 139 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 PLXDC1Q8IUK5 500 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 EID2Q8N6I1 236 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 HORMAD2Q8N7B1 307 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 PXT1Q8NFP0 134 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 OR1M1Q8NGA1 313 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 OR2A1Q8NGT9 310 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 HAVCR2Q8TDQ0 301 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 PIGCQ92535 297 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 TCEAL3Q969E4 200 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 AKR1E2Q96JD6 320 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 HIST1H2AAQ96QV6 131 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 KIR3DX1Q9H7L2 352 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 GPR35Q9HC97 309 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 MYNNQ9NPC7 610 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 AP5S1Q9NUS5 200 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 TEX10Q9NXF1 929 aaPredicted RBP8.37□□□□□ -1.07
SNHG3-201ENST00000413987 BABAM2Q9NXR7 383 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 GPR160Q9UJ42 338 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 FBXL3Q9UKT7 428 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 CHST2Q9Y4C5 530 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 R4GN57 208 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 ARID1BQ8NFD5 2236 aaPredicted RBP8.37□□□□□ -1.07
SNHG3-201ENST00000413987 LOC100289279A0A1B0GTE1 492 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 SMCO3A2RU48 225 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 SNAI2O43623 268 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 CREBL2O60519 120 aaPredicted RBP8.37□□□□□ -1.07
SNHG3-201ENST00000413987 BCHEP06276 602 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 PVRP15151 417 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 ATP5A1P25705 553 aaKnown RBP8.37□□□□□ -1.07
SNHG3-201ENST00000413987 IER3P46695 156 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 DGCR2P98153 550 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 HHEXQ03014 270 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 SERTAD2Q14140 314 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 IL13RA2Q14627 380 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 MICBQ29980 383 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 VASNQ6EMK4 673 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 Q6ZTK2 550 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 SLC25A45Q8N413 288 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 ACBD4Q8NC06 268 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 OR5AK3PQ8NH89 298 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 M1APQ8TC57 530 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 SMIM4Q8WVI0 70 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 ASB13Q8WXK3 278 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 SMPDL3BQ92485 455 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 NR4A3Q92570 626 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 LHX4Q969G2 390 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 ZNF251Q9BRH9 671 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 SEC22CQ9BRL7 303 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 SRMSQ9H3Y6 488 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 EQTNQ9NQ60 294 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 PILRBQ9UKJ0 227 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 DYRK1BQ9Y463 629 aa8.37□□□□□ -1.07
SNHG3-201ENST00000413987 TNRC6BQ9UPQ9 1833 aaKnown RBP8.36□□□□□ -1.07
SNHG3-201ENST00000413987 FAM74A7A6NL05 159 aa8.36□□□□□ -1.07
SNHG3-201ENST00000413987 ZNF729A6NN14 1252 aaPredicted RBP8.36□□□□□ -1.07
SNHG3-201ENST00000413987 OR2AT4A6NND4 320 aa8.36□□□□□ -1.07
SNHG3-201ENST00000413987 NPIPB5A8MRT5 1133 aa8.36□□□□□ -1.07
SNHG3-201ENST00000413987 HYAL3O43820 417 aaPredicted RBP8.36□□□□□ -1.07
SNHG3-201ENST00000413987 CST4P01036 141 aa8.36□□□□□ -1.07
SNHG3-201ENST00000413987 TGFB1P01137 390 aa8.36□□□□□ -1.07
SNHG3-201ENST00000413987 SP9P0CG40 484 aa8.36□□□□□ -1.07
SNHG3-201ENST00000413987 SHC1P29353 583 aa8.36□□□□□ -1.07
SNHG3-201ENST00000413987 HTR1FP30939 366 aa8.36□□□□□ -1.07
SNHG3-201ENST00000413987 OTX1P32242 354 aaPredicted RBP8.36□□□□□ -1.07
SNHG3-201ENST00000413987 BLKP51451 505 aa8.36□□□□□ -1.07
SNHG3-201ENST00000413987 FOXL2P58012 376 aa8.36□□□□□ -1.07
SNHG3-201ENST00000413987 SNRPNP63162 240 aaKnown RBP8.36□□□□□ -1.07
SNHG3-201ENST00000413987 SLC3A1Q07837 685 aa8.36□□□□□ -1.07
SNHG3-201ENST00000413987 MAPK14Q16539 360 aa8.36□□□□□ -1.07
SNHG3-201ENST00000413987 CHRFAM7AQ494W8 412 aa8.36□□□□□ -1.07
SNHG3-201ENST00000413987 FAM74A3Q4VXF1 159 aa8.36□□□□□ -1.07
SNHG3-201ENST00000413987 PLA2G2CQ5R387 149 aa8.36□□□□□ -1.07
SNHG3-201ENST00000413987 UQCC3Q6UW78 93 aa8.36□□□□□ -1.07
SNHG3-201ENST00000413987 DOK3Q7L591 496 aa8.36□□□□□ -1.07
SNHG3-201ENST00000413987 OR10J5Q8NHC4 309 aa8.36□□□□□ -1.07
SNHG3-201ENST00000413987 SLC38A5Q8WUX1 472 aa8.36□□□□□ -1.07
SNHG3-201ENST00000413987 SMPDL3AQ92484 453 aa8.36□□□□□ -1.07
SNHG3-201ENST00000413987 NPIPB3Q92617 1050 aa8.36□□□□□ -1.07
SNHG3-201ENST00000413987 NEURL3Q96EH8 262 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms