RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 LHX4Q969G2 390 aa10.02□□□□□ -0.81
LIMS2-210ENST00000413578 RSRC1Q96IZ7 334 aaKnown RBP10.02□□□□□ -0.81
LIMS2-210ENST00000413578 FUZQ9BT04 418 aa10.02□□□□□ -0.81
LIMS2-210ENST00000413578 TMEM120AQ9BXJ8 343 aa10.02□□□□□ -0.81
LIMS2-210ENST00000413578 SLC22A4Q9H015 551 aa10.02□□□□□ -0.81
LIMS2-210ENST00000413578 RASSF4Q9H2L5 321 aa10.02□□□□□ -0.81
LIMS2-210ENST00000413578 FN3KRPQ9HA64 309 aa10.02□□□□□ -0.81
LIMS2-210ENST00000413578 SAR1AQ9NR31 198 aa10.02□□□□□ -0.81
LIMS2-210ENST00000413578 MRGBPQ9NV56 204 aa10.02□□□□□ -0.81
LIMS2-210ENST00000413578 ZNRD1Q9P1U0 126 aa10.02□□□□□ -0.81
LIMS2-210ENST00000413578 CYB5R1Q9UHQ9 305 aa10.02□□□□□ -0.81
LIMS2-210ENST00000413578 KPTNQ9Y664 436 aa10.02□□□□□ -0.81
LIMS2-210ENST00000413578 ENPP4Q9Y6X5 453 aa10.02□□□□□ -0.81
LIMS2-210ENST00000413578 TRAV38-1A0A0B4J264 116 aa10.01□□□□□ -0.81
LIMS2-210ENST00000413578 LOC100653049A0A140TA62 436 aa10.01□□□□□ -0.81
LIMS2-210ENST00000413578 OOEPA6NGQ2 149 aa10.01□□□□□ -0.81
LIMS2-210ENST00000413578 CD300LBA8K4G0 201 aa10.01□□□□□ -0.81
LIMS2-210ENST00000413578 C3orf80F5H4A9 247 aa10.01□□□□□ -0.81
LIMS2-210ENST00000413578 F5H5K5 113 aa10.01□□□□□ -0.81
LIMS2-210ENST00000413578 OR10H3O60404 316 aa10.01□□□□□ -0.81
LIMS2-210ENST00000413578 GMDSO60547 372 aa10.01□□□□□ -0.81
LIMS2-210ENST00000413578 KRT34O76011 436 aa10.01□□□□□ -0.81
LIMS2-210ENST00000413578 OTX1P32242 354 aaPredicted RBP10.01□□□□□ -0.81
LIMS2-210ENST00000413578 ARF6P62330 175 aa10.01□□□□□ -0.81
LIMS2-210ENST00000413578 TRAP1Q12931 704 aaKnown RBP10.01□□□□□ -0.81
LIMS2-210ENST00000413578 MALLQ13021 153 aa10.01□□□□□ -0.81
LIMS2-210ENST00000413578 OR8G1Q15617 311 aa10.01□□□□□ -0.81
LIMS2-210ENST00000413578 C2orf68Q2NKX9 166 aa10.01□□□□□ -0.81
LIMS2-210ENST00000413578 HIST2H2BDQ6DRA6 164 aa10.01□□□□□ -0.81
LIMS2-210ENST00000413578 DNM1P34Q6PK57 102 aa10.01□□□□□ -0.81
LIMS2-210ENST00000413578 METAP1DQ6UB28 335 aaPredicted RBP10.01□□□□□ -0.81
LIMS2-210ENST00000413578 PGAP1Q75T13 922 aa10.01□□□□□ -0.81
LIMS2-210ENST00000413578 BTN2A1Q7KYR7 527 aa10.01□□□□□ -0.81
LIMS2-210ENST00000413578 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.01□□□□□ -0.81
LIMS2-210ENST00000413578 ZBTB46Q86UZ6 589 aa10.01□□□□□ -0.81
LIMS2-210ENST00000413578 LINC00346Q8IVM7 164 aa10.01□□□□□ -0.81
LIMS2-210ENST00000413578 SLC15A3Q8IY34 581 aa10.01□□□□□ -0.81
LIMS2-210ENST00000413578 LY6G5BQ8NDX9 201 aa10.01□□□□□ -0.81
LIMS2-210ENST00000413578 FAM110DQ8TAY7 271 aaPredicted RBP10.01□□□□□ -0.81
LIMS2-210ENST00000413578 LRTOMTQ8WZ04 291 aa10.01□□□□□ -0.81
LIMS2-210ENST00000413578 ATF6BQ99941 703 aa10.01□□□□□ -0.81
LIMS2-210ENST00000413578 TRIM36Q9NQ86 728 aa10.01□□□□□ -0.81
LIMS2-210ENST00000413578 GID8Q9NWU2 228 aa10.01□□□□□ -0.81
LIMS2-210ENST00000413578 RPUSD1Q9UJJ7 312 aaKnown RBP10.01□□□□□ -0.81
LIMS2-210ENST00000413578 NOP16Q9Y3C1 178 aaKnown RBP10.01□□□□□ -0.81
LIMS2-210ENST00000413578 TRBV4-1A0A0J9YWV2 114 aa10□□□□□ -0.81
LIMS2-210ENST00000413578 CXCR6O00574 342 aa10□□□□□ -0.81
LIMS2-210ENST00000413578 DVL1O14640 695 aa10□□□□□ -0.81
LIMS2-210ENST00000413578 ARPC3O15145 178 aa10□□□□□ -0.81
LIMS2-210ENST00000413578 ZNF682O95780 498 aa10□□□□□ -0.81
LIMS2-210ENST00000413578 ECDO95905 644 aaPredicted RBP10□□□□□ -0.81
LIMS2-210ENST00000413578 GYPAP02724 150 aa10□□□□□ -0.81
LIMS2-210ENST00000413578 LCATP04180 440 aa10□□□□□ -0.81
LIMS2-210ENST00000413578 RPS6KA3P51812 740 aa10□□□□□ -0.81
LIMS2-210ENST00000413578 ZNF92Q03936 586 aa10□□□□□ -0.81
LIMS2-210ENST00000413578 SEC23BQ15437 767 aa10□□□□□ -0.81
LIMS2-210ENST00000413578 MAPRE2Q15555 327 aa10□□□□□ -0.81
LIMS2-210ENST00000413578 OR8B8Q15620 311 aa10□□□□□ -0.81
LIMS2-210ENST00000413578 CDONQ4KMG0 1287 aa10□□□□□ -0.81
LIMS2-210ENST00000413578 ZNF826PQ6ZT77 177 aa10□□□□□ -0.81
LIMS2-210ENST00000413578 VMO1Q7Z5L0 202 aa10□□□□□ -0.81
LIMS2-210ENST00000413578 SPRYD4Q8WW59 207 aaPredicted RBP10□□□□□ -0.81
LIMS2-210ENST00000413578 MAP6Q96JE9 813 aa10□□□□□ -0.81
LIMS2-210ENST00000413578 DHRS1Q96LJ7 313 aa10□□□□□ -0.81
LIMS2-210ENST00000413578 DMRTB1Q96MA1 342 aa10□□□□□ -0.81
LIMS2-210ENST00000413578 NMNAT3Q96T66 252 aa10□□□□□ -0.81
LIMS2-210ENST00000413578 PITX2Q99697 317 aa10□□□□□ -0.81
LIMS2-210ENST00000413578 ADAT1Q9BUB4 502 aaKnown RBP10□□□□□ -0.81
LIMS2-210ENST00000413578 DPAGT1Q9H3H5 408 aa10□□□□□ -0.81
LIMS2-210ENST00000413578 CNTD2Q9H8S5 307 aa10□□□□□ -0.81
LIMS2-210ENST00000413578 MRPL22Q9NWU5 206 aaKnown RBP10□□□□□ -0.81
LIMS2-210ENST00000413578 C1orf123Q9NWV4 160 aa10□□□□□ -0.81
LIMS2-210ENST00000413578 MRPL15Q9P015 296 aaKnown RBP10□□□□□ -0.81
LIMS2-210ENST00000413578 NDUFAF4Q9P032 175 aa10□□□□□ -0.81
LIMS2-210ENST00000413578 VPREB3Q9UKI3 123 aa10□□□□□ -0.81
LIMS2-210ENST00000413578 AP3M1Q9Y2T2 418 aa10□□□□□ -0.81
LIMS2-210ENST00000413578 A0A1B0GVI7 797 aa9.99□□□□□ -0.81
LIMS2-210ENST00000413578 A0A1B0GW55 424 aa9.99□□□□□ -0.81
LIMS2-210ENST00000413578 UNC119BA6NIH7 251 aa9.99□□□□□ -0.81
LIMS2-210ENST00000413578 G3V4G9 280 aa9.99□□□□□ -0.81
LIMS2-210ENST00000413578 M0R135 149 aa9.99□□□□□ -0.81
LIMS2-210ENST00000413578 SERPINA1P01009 418 aa9.99□□□□□ -0.81
LIMS2-210ENST00000413578 H1F0P07305 194 aaKnown RBP9.99□□□□□ -0.81
LIMS2-210ENST00000413578 DUX4L2P0CJ85 424 aa9.99□□□□□ -0.81
LIMS2-210ENST00000413578 DUX4L3P0CJ86 424 aa9.99□□□□□ -0.81
LIMS2-210ENST00000413578 DUX4L4P0CJ87 422 aa9.99□□□□□ -0.81
LIMS2-210ENST00000413578 DUX4L5P0CJ88 424 aa9.99□□□□□ -0.81
LIMS2-210ENST00000413578 DUX4L6P0CJ89 424 aa9.99□□□□□ -0.81
LIMS2-210ENST00000413578 DUX4L7P0CJ90 424 aa9.99□□□□□ -0.81
LIMS2-210ENST00000413578 HIST1H1CP16403 213 aaKnown RBP9.99□□□□□ -0.81
LIMS2-210ENST00000413578 LIPEQ05469 1076 aa9.99□□□□□ -0.81
LIMS2-210ENST00000413578 SNAI3Q3KNW1 292 aa9.99□□□□□ -0.81
LIMS2-210ENST00000413578 SLC36A3Q495N2 470 aa9.99□□□□□ -0.81
LIMS2-210ENST00000413578 SAMD5Q5TGI4 173 aa9.99□□□□□ -0.81
LIMS2-210ENST00000413578 CGB2Q6NT52 195 aa9.99□□□□□ -0.81
LIMS2-210ENST00000413578 C8orf82Q6P1X6 216 aaPredicted RBP9.99□□□□□ -0.81
LIMS2-210ENST00000413578 DUX4L9Q6RFH8 374 aaPredicted RBP9.99□□□□□ -0.81
LIMS2-210ENST00000413578 SMARCD3Q6STE5 483 aa9.99□□□□□ -0.81
LIMS2-210ENST00000413578 Q6ZPA2 131 aa9.99□□□□□ -0.81
LIMS2-210ENST00000413578 FKBP9P1Q75LS8 142 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms