RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 PRAMEF6Q5VXH4 476 aa8.57□□□□□ -1.04
NCKIPSD-202ENST00000413374 SHQ1Q6PI26 577 aaKnown RBP8.57□□□□□ -1.04
NCKIPSD-202ENST00000413374 C1orf229Q6ZS94 237 aaPredicted RBP8.57□□□□□ -1.04
NCKIPSD-202ENST00000413374 LRRC28Q86X40 367 aaPredicted RBP8.57□□□□□ -1.04
NCKIPSD-202ENST00000413374 CPOQ8IVL8 374 aa8.57□□□□□ -1.04
NCKIPSD-202ENST00000413374 BOLLQ8N9W6 283 aaKnown RBP8.57□□□□□ -1.04
NCKIPSD-202ENST00000413374 PAPD5Q8NDF8 572 aaKnown RBP8.57□□□□□ -1.04
NCKIPSD-202ENST00000413374 BBS1Q8NFJ9 593 aa8.57□□□□□ -1.04
NCKIPSD-202ENST00000413374 THEM6Q8WUY1 208 aa8.57□□□□□ -1.04
NCKIPSD-202ENST00000413374 INTS14Q96SY0 518 aa8.57□□□□□ -1.04
NCKIPSD-202ENST00000413374 AMELYQ99218 206 aa8.57□□□□□ -1.04
NCKIPSD-202ENST00000413374 KCNJ15Q99712 375 aa8.57□□□□□ -1.04
NCKIPSD-202ENST00000413374 ABHD6Q9BV23 337 aa8.57□□□□□ -1.04
NCKIPSD-202ENST00000413374 NTN4Q9HB63 628 aa8.57□□□□□ -1.04
NCKIPSD-202ENST00000413374 G6PC2Q9NQR9 355 aa8.57□□□□□ -1.04
NCKIPSD-202ENST00000413374 UFSP2Q9NUQ7 469 aa8.57□□□□□ -1.04
NCKIPSD-202ENST00000413374 TVP23BQ9NYZ1 205 aa8.57□□□□□ -1.04
NCKIPSD-202ENST00000413374 METRNQ9UJH8 293 aa8.57□□□□□ -1.04
NCKIPSD-202ENST00000413374 CHD3Q12873 2000 aaKnown RBP8.57□□□□□ -1.04
NCKIPSD-202ENST00000413374 FBN1P35555 2871 aaKnown RBP8.56□□□□□ -1.04
NCKIPSD-202ENST00000413374 ARRDC5A6NEK1 342 aa8.56□□□□□ -1.04
NCKIPSD-202ENST00000413374 CD300LBA8K4G0 201 aa8.56□□□□□ -1.04
NCKIPSD-202ENST00000413374 SELENOFO60613 162 aa8.56□□□□□ -1.04
NCKIPSD-202ENST00000413374 GLCEO94923 617 aa8.56□□□□□ -1.04
NCKIPSD-202ENST00000413374 PNPP00491 289 aa8.56□□□□□ -1.04
NCKIPSD-202ENST00000413374 HMGN1P05114 100 aa8.56□□□□□ -1.04
NCKIPSD-202ENST00000413374 ANXA8P13928 327 aa8.56□□□□□ -1.04
NCKIPSD-202ENST00000413374 PAICSP22234 425 aaKnown RBP8.56□□□□□ -1.04
NCKIPSD-202ENST00000413374 HSD11B1P28845 292 aa8.56□□□□□ -1.04
NCKIPSD-202ENST00000413374 NAA10P41227 235 aaPredicted RBP8.56□□□□□ -1.04
NCKIPSD-202ENST00000413374 CX3CR1P49238 355 aa8.56□□□□□ -1.04
NCKIPSD-202ENST00000413374 DAPP51397 102 aa8.56□□□□□ -1.04
NCKIPSD-202ENST00000413374 RAD23AP54725 363 aa8.56□□□□□ -1.04
NCKIPSD-202ENST00000413374 RPS7P62081 194 aaKnown RBP8.56□□□□□ -1.04
NCKIPSD-202ENST00000413374 CDK5Q00535 292 aa8.56□□□□□ -1.04
NCKIPSD-202ENST00000413374 MAB21L1Q13394 359 aa8.56□□□□□ -1.04
NCKIPSD-202ENST00000413374 GK3PQ14409 553 aa8.56□□□□□ -1.04
NCKIPSD-202ENST00000413374 MPPED2Q15777 294 aa8.56□□□□□ -1.04
NCKIPSD-202ENST00000413374 SNAPC1Q16533 368 aa8.56□□□□□ -1.04
NCKIPSD-202ENST00000413374 GFOD2Q3B7J2 385 aa8.56□□□□□ -1.04
NCKIPSD-202ENST00000413374 TEX30Q5JUR7 227 aa8.56□□□□□ -1.04
NCKIPSD-202ENST00000413374 DCAF12L2Q5VW00 463 aa8.56□□□□□ -1.04
NCKIPSD-202ENST00000413374 DRAM2Q6UX65 266 aa8.56□□□□□ -1.04
NCKIPSD-202ENST00000413374 FAM57BQ71RH2 274 aa8.56□□□□□ -1.04
NCKIPSD-202ENST00000413374 AMIGO2Q86SJ2 522 aa8.56□□□□□ -1.04
NCKIPSD-202ENST00000413374 KLHL36Q8N4N3 616 aa8.56□□□□□ -1.04
NCKIPSD-202ENST00000413374 DEFB108BQ8NET1 73 aa8.56□□□□□ -1.04
NCKIPSD-202ENST00000413374 PLEKHA8Q96JA3 519 aa8.56□□□□□ -1.04
NCKIPSD-202ENST00000413374 SIGLEC11Q96RL6 698 aa8.56□□□□□ -1.04
NCKIPSD-202ENST00000413374 REPIN1Q9BWE0 567 aaKnown RBP8.56□□□□□ -1.04
NCKIPSD-202ENST00000413374 TMPRSS13Q9BYE2 586 aa8.56□□□□□ -1.04
NCKIPSD-202ENST00000413374 C7orf69Q9H7B7 122 aa8.56□□□□□ -1.04
NCKIPSD-202ENST00000413374 PATZ1Q9HBE1 687 aaKnown RBP8.56□□□□□ -1.04
NCKIPSD-202ENST00000413374 TMEM165Q9HC07 324 aa8.56□□□□□ -1.04
NCKIPSD-202ENST00000413374 MMP26Q9NRE1 261 aa8.56□□□□□ -1.04
NCKIPSD-202ENST00000413374 DDX28Q9NUL7 540 aaKnown RBP8.56□□□□□ -1.04
NCKIPSD-202ENST00000413374 KIF17Q9P2E2 1029 aa8.56□□□□□ -1.04
NCKIPSD-202ENST00000413374 YLPM1P49750 1951 aaKnown RBP8.55□□□□□ -1.04
NCKIPSD-202ENST00000413374 A0A0G2JMP0 313 aa8.55□□□□□ -1.04
NCKIPSD-202ENST00000413374 A0A0X1KG70 313 aa8.55□□□□□ -1.04
NCKIPSD-202ENST00000413374 ZNF878C9JN71 531 aa8.55□□□□□ -1.04
NCKIPSD-202ENST00000413374 TRAPPC2LH3BP13 241 aa8.55□□□□□ -1.04
NCKIPSD-202ENST00000413374 MITFO75030 526 aaPredicted RBP8.55□□□□□ -1.04
NCKIPSD-202ENST00000413374 GRPP07492 148 aa8.55□□□□□ -1.04
NCKIPSD-202ENST00000413374 MRPL3P09001 348 aaKnown RBP8.55□□□□□ -1.04
NCKIPSD-202ENST00000413374 H2BFMP0C1H6 154 aa8.55□□□□□ -1.04
NCKIPSD-202ENST00000413374 IRF2P14316 349 aa8.55□□□□□ -1.04
NCKIPSD-202ENST00000413374 OTX1P32242 354 aaPredicted RBP8.55□□□□□ -1.04
NCKIPSD-202ENST00000413374 SLC15A1P46059 708 aa8.55□□□□□ -1.04
NCKIPSD-202ENST00000413374 BLVRAP53004 296 aa8.55□□□□□ -1.04
NCKIPSD-202ENST00000413374 CRISP1P54107 249 aa8.55□□□□□ -1.04
NCKIPSD-202ENST00000413374 PCK2Q16822 640 aa8.55□□□□□ -1.04
NCKIPSD-202ENST00000413374 BCDIN3DQ7Z5W3 292 aaKnown RBP8.55□□□□□ -1.04
NCKIPSD-202ENST00000413374 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.55□□□□□ -1.04
NCKIPSD-202ENST00000413374 TIGD4Q8IY51 512 aa8.55□□□□□ -1.04
NCKIPSD-202ENST00000413374 SPICQ8N5J4 248 aa8.55□□□□□ -1.04
NCKIPSD-202ENST00000413374 OR4M2Q8NGB6 313 aa8.55□□□□□ -1.04
NCKIPSD-202ENST00000413374 SPATA3Q8NHX4 192 aa8.55□□□□□ -1.04
NCKIPSD-202ENST00000413374 C22orf15Q8WYQ4 148 aa8.55□□□□□ -1.04
NCKIPSD-202ENST00000413374 UTP4Q969X6 686 aaKnown RBP8.55□□□□□ -1.04
NCKIPSD-202ENST00000413374 SGK3Q96BR1 496 aa8.55□□□□□ -1.04
NCKIPSD-202ENST00000413374 PPP1R3EQ9H7J1 279 aa8.55□□□□□ -1.04
NCKIPSD-202ENST00000413374 PAPOLBQ9NRJ5 636 aaKnown RBP8.55□□□□□ -1.04
NCKIPSD-202ENST00000413374 PPIAL4EA0A075B759 164 aa8.54□□□□□ -1.04
NCKIPSD-202ENST00000413374 CEACAM18A8MTB9 384 aa8.54□□□□□ -1.04
NCKIPSD-202ENST00000413374 PPIAL4DF5H284 164 aa8.54□□□□□ -1.04
NCKIPSD-202ENST00000413374 M0R129 80 aa8.54□□□□□ -1.04
NCKIPSD-202ENST00000413374 PSMD9O00233 223 aa8.54□□□□□ -1.04
NCKIPSD-202ENST00000413374 TCF21O43680 179 aa8.54□□□□□ -1.04
NCKIPSD-202ENST00000413374 FAM20BO75063 409 aa8.54□□□□□ -1.04
NCKIPSD-202ENST00000413374 FOXH1O75593 365 aa8.54□□□□□ -1.04
NCKIPSD-202ENST00000413374 LYNP07948 512 aa8.54□□□□□ -1.04
NCKIPSD-202ENST00000413374 PPIAL4FP0DN26 164 aa8.54□□□□□ -1.04
NCKIPSD-202ENST00000413374 MDH2P40926 338 aaKnown RBP8.54□□□□□ -1.04
NCKIPSD-202ENST00000413374 RASSF2P50749 326 aa8.54□□□□□ -1.04
NCKIPSD-202ENST00000413374 ZNF121P58317 390 aaPredicted RBP8.54□□□□□ -1.04
NCKIPSD-202ENST00000413374 GRB2P62993 217 aaKnown RBP8.54□□□□□ -1.04
NCKIPSD-202ENST00000413374 POU4F2Q12837 409 aa8.54□□□□□ -1.04
NCKIPSD-202ENST00000413374 APOFQ13790 326 aa8.54□□□□□ -1.04
NCKIPSD-202ENST00000413374 PTGES3Q15185 160 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms