RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 ADAT3Q96EY9 351 aaPredicted RBP15.69■□□□□ 0.1
SDCBP-202ENST00000413219 KCNK17Q96T54 332 aa15.69■□□□□ 0.1
SDCBP-202ENST00000413219 C17orf51A8MQB3 221 aa15.68■□□□□ 0.1
SDCBP-202ENST00000413219 TAAR5O14804 337 aa15.68■□□□□ 0.1
SDCBP-202ENST00000413219 SYT7O43581 403 aa15.68■□□□□ 0.1
SDCBP-202ENST00000413219 SEMA4FO95754 770 aa15.68■□□□□ 0.1
SDCBP-202ENST00000413219 PET100P0DJ07 73 aa15.68■□□□□ 0.1
SDCBP-202ENST00000413219 EMP2P54851 167 aa15.68■□□□□ 0.1
SDCBP-202ENST00000413219 FZD2Q14332 565 aa15.68■□□□□ 0.1
SDCBP-202ENST00000413219 ELAVL1Q15717 326 aaKnown RBP15.68■□□□□ 0.1
SDCBP-202ENST00000413219 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.68■□□□□ 0.1
SDCBP-202ENST00000413219 TMPPEQ6ZT21 453 aa15.68■□□□□ 0.1
SDCBP-202ENST00000413219 PEG10Q86TG7 708 aaKnown RBP15.68■□□□□ 0.1
SDCBP-202ENST00000413219 NAA40Q86UY6 237 aa15.68■□□□□ 0.1
SDCBP-202ENST00000413219 NUBPLQ8TB37 319 aa15.68■□□□□ 0.1
SDCBP-202ENST00000413219 SFT2D1Q8WV19 159 aa15.68■□□□□ 0.1
SDCBP-202ENST00000413219 ZC3H10Q96K80 434 aaKnown RBP15.68■□□□□ 0.1
SDCBP-202ENST00000413219 SLC7A5P2Q9GIP4 190 aa15.68■□□□□ 0.1
SDCBP-202ENST00000413219 C5orf66Q9H5L9 145 aa15.68■□□□□ 0.1
SDCBP-202ENST00000413219 RNF122Q9H9V4 155 aa15.68■□□□□ 0.1
SDCBP-202ENST00000413219 LAMA3Q16787 3333 aa15.68■□□□□ 0.1
SDCBP-202ENST00000413219 MSGN1A6NI15 193 aa15.67■□□□□ 0.1
SDCBP-202ENST00000413219 B4DGG1 531 aa15.67■□□□□ 0.1
SDCBP-202ENST00000413219 NPIPA5E9PKD4 350 aa15.67■□□□□ 0.1
SDCBP-202ENST00000413219 MBTPS2O43462 519 aa15.67■□□□□ 0.1
SDCBP-202ENST00000413219 F12P00748 615 aaPredicted RBP15.67■□□□□ 0.1
SDCBP-202ENST00000413219 CSTBP04080 98 aaKnown RBP15.67■□□□□ 0.1
SDCBP-202ENST00000413219 FPR2P25090 351 aa15.67■□□□□ 0.1
SDCBP-202ENST00000413219 CTHP32929 405 aa15.67■□□□□ 0.1
SDCBP-202ENST00000413219 CLDN6P56747 220 aa15.67■□□□□ 0.1
SDCBP-202ENST00000413219 C1orf61Q13536 156 aa15.67■□□□□ 0.1
SDCBP-202ENST00000413219 KLHL24Q6TFL4 600 aa15.67■□□□□ 0.1
SDCBP-202ENST00000413219 CLEC18BQ6UXF7 455 aa15.67■□□□□ 0.1
SDCBP-202ENST00000413219 OR11A1Q9GZK7 315 aa15.67■□□□□ 0.1
SDCBP-202ENST00000413219 SLC5A7Q9GZV3 580 aa15.67■□□□□ 0.1
SDCBP-202ENST00000413219 LPAR5Q9H1C0 372 aa15.67■□□□□ 0.1
SDCBP-202ENST00000413219 TMEM231Q9H6L2 316 aa15.67■□□□□ 0.1
SDCBP-202ENST00000413219 PTGES2Q9H7Z7 377 aa15.67■□□□□ 0.1
SDCBP-202ENST00000413219 CENPMQ9NSP4 180 aa15.67■□□□□ 0.1
SDCBP-202ENST00000413219 NPIPA1Q9UND3 350 aa15.67■□□□□ 0.1
SDCBP-202ENST00000413219 POMT1Q9Y6A1 747 aa15.67■□□□□ 0.1
SDCBP-202ENST00000413219 HLA-DOBP13765 273 aa15.67■□□□□ 0.1
SDCBP-202ENST00000413219 MUC1P15941 1255 aaPredicted RBP15.67■□□□□ 0.1
SDCBP-202ENST00000413219 MRPS21P82921 87 aaKnown RBP15.67■□□□□ 0.1
SDCBP-202ENST00000413219 FMODQ06828 376 aa15.67■□□□□ 0.1
SDCBP-202ENST00000413219 FAM189A2Q15884 450 aa15.67■□□□□ 0.1
SDCBP-202ENST00000413219 NSUN5P2Q63ZY6 315 aa15.67■□□□□ 0.1
SDCBP-202ENST00000413219 ANGPTL5Q86XS5 388 aa15.67■□□□□ 0.1
SDCBP-202ENST00000413219 C9orf40Q8IXQ3 194 aa15.67■□□□□ 0.1
SDCBP-202ENST00000413219 TSLPQ969D9 159 aa15.67■□□□□ 0.1
SDCBP-202ENST00000413219 C2orf50Q96LR7 162 aa15.67■□□□□ 0.1
SDCBP-202ENST00000413219 MICU1Q9BPX6 476 aa15.67■□□□□ 0.1
SDCBP-202ENST00000413219 CMSS1Q9BQ75 279 aaKnown RBP15.67■□□□□ 0.1
SDCBP-202ENST00000413219 NRSN2Q9GZP1 204 aa15.67■□□□□ 0.1
SDCBP-202ENST00000413219 PBOV1Q9GZY1 135 aa15.67■□□□□ 0.1
SDCBP-202ENST00000413219 GPR27Q9NS67 375 aa15.67■□□□□ 0.1
SDCBP-202ENST00000413219 OR5AC2Q9NZP5 309 aa15.67■□□□□ 0.1
SDCBP-202ENST00000413219 MS4A18H0YCH9 400 aa15.66■□□□□ 0.1
SDCBP-202ENST00000413219 CA3P07451 260 aa15.66■□□□□ 0.1
SDCBP-202ENST00000413219 HIST1H1DP16402 221 aaKnown RBP15.66■□□□□ 0.1
SDCBP-202ENST00000413219 ZNF93P35789 620 aaPredicted RBP15.66■□□□□ 0.1
SDCBP-202ENST00000413219 PEA15Q15121 130 aa15.66■□□□□ 0.1
SDCBP-202ENST00000413219 MS4A18Q3C1V0 323 aa15.66■□□□□ 0.1
SDCBP-202ENST00000413219 OCSTAMPQ9BR26 566 aa15.66■□□□□ 0.1
SDCBP-202ENST00000413219 CHRNA10Q9GZZ6 450 aa15.66■□□□□ 0.1
SDCBP-202ENST00000413219 SLC26A1Q9H2B4 701 aa15.66■□□□□ 0.1
SDCBP-202ENST00000413219 SEC61A2Q9H9S3 476 aa15.66■□□□□ 0.1
SDCBP-202ENST00000413219 SRPK3Q9UPE1 567 aa15.66■□□□□ 0.1
SDCBP-202ENST00000413219 RNASEK-C17orf49H0YIS7 233 aa15.66■□□□□ 0.1
SDCBP-202ENST00000413219 ZNF217O75362 1048 aa15.66■□□□□ 0.1
SDCBP-202ENST00000413219 IGHV4-34P06331 123 aa15.66■□□□□ 0.1
SDCBP-202ENST00000413219 BLKP51451 505 aa15.66■□□□□ 0.1
SDCBP-202ENST00000413219 TSC22D1Q15714 1073 aa15.66■□□□□ 0.1
SDCBP-202ENST00000413219 PTCRAQ6ISU1 281 aaPredicted RBP15.66■□□□□ 0.1
SDCBP-202ENST00000413219 TMEM92Q6UXU6 159 aa15.66■□□□□ 0.1
SDCBP-202ENST00000413219 Q7L0L9 218 aa15.66■□□□□ 0.1
SDCBP-202ENST00000413219 KDM8Q8N371 416 aa15.66■□□□□ 0.1
SDCBP-202ENST00000413219 POC1AQ8NBT0 407 aa15.66■□□□□ 0.1
SDCBP-202ENST00000413219 OR13C9Q8NGT0 318 aa15.66■□□□□ 0.1
SDCBP-202ENST00000413219 SLAMF6Q96DU3 332 aa15.66■□□□□ 0.1
SDCBP-202ENST00000413219 RAB3CQ96E17 227 aa15.66■□□□□ 0.1
SDCBP-202ENST00000413219 CDCA3Q99618 268 aaPredicted RBP15.66■□□□□ 0.1
SDCBP-202ENST00000413219 WWTR1Q9GZV5 400 aa15.66■□□□□ 0.1
SDCBP-202ENST00000413219 HRH4Q9H3N8 390 aa15.66■□□□□ 0.1
SDCBP-202ENST00000413219 UCK1Q9HA47 277 aa15.66■□□□□ 0.1
SDCBP-202ENST00000413219 ALPK2Q86TB3 2170 aa15.65■□□□□ 0.1
SDCBP-202ENST00000413219 ATG2AQ2TAZ0 1938 aa15.65■□□□□ 0.1
SDCBP-202ENST00000413219 CDC14CA4D256 554 aa15.65■□□□□ 0.1
SDCBP-202ENST00000413219 ADAP1O75689 374 aa15.65■□□□□ 0.1
SDCBP-202ENST00000413219 CD5P06127 495 aa15.65■□□□□ 0.1
SDCBP-202ENST00000413219 KCNJ3P48549 501 aa15.65■□□□□ 0.1
SDCBP-202ENST00000413219 CCR5P51681 352 aa15.65■□□□□ 0.1
SDCBP-202ENST00000413219 SUPT4H1P63272 117 aaKnown RBP15.65■□□□□ 0.1
SDCBP-202ENST00000413219 IL15RAQ13261 267 aa15.65■□□□□ 0.1
SDCBP-202ENST00000413219 COX15Q7KZN9 410 aa15.65■□□□□ 0.1
SDCBP-202ENST00000413219 ZNF101Q8IZC7 436 aa15.65■□□□□ 0.1
SDCBP-202ENST00000413219 OR2I1PQ8NGU4 316 aa15.65■□□□□ 0.1
SDCBP-202ENST00000413219 KCNG3Q8TAE7 436 aa15.65■□□□□ 0.1
SDCBP-202ENST00000413219 TMEM234Q8WY98 164 aa15.65■□□□□ 0.1
SDCBP-202ENST00000413219 ROBO4Q8WZ75 1007 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms