RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 ZNF75AQ96N20 296 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 GFI1Q99684 422 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 VKORC1Q9BQB6 163 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 SOX7Q9BT81 388 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 C6orf62Q9GZU0 229 aaPredicted RBP5.78□□□□□ -1.48
VPS41-204ENST00000413141 OR10A2Q9H208 303 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 TPK1Q9H3S4 243 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 SMURF1Q9HCE7 757 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 OBP2BQ9NPH6 170 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 GPR84Q9NQS5 396 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 ZNF629Q9UEG4 869 aaPredicted RBP5.78□□□□□ -1.48
VPS41-204ENST00000413141 PLEKHB1Q9UF11 243 aaPredicted RBP5.78□□□□□ -1.48
VPS41-204ENST00000413141 MEMO1Q9Y316 297 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 N6AMT1Q9Y5N5 214 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 SVILO95425 2214 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 NCOA6Q14686 2063 aaPredicted RBP5.78□□□□□ -1.48
VPS41-204ENST00000413141 MAP1BP46821 2468 aaKnown RBP5.77□□□□□ -1.48
VPS41-204ENST00000413141 SHANK1Q9Y566 2161 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 A0A075B6Q4 140 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 A0A1W2PR80 420 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 C5orf49A4QMS7 147 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 OR5H1A6NKK0 313 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 A8MXE2 369 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 PDCD5O14737 125 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 DHRS3O75911 302 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 IGKV3-15P01624 115 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 LCATP04180 440 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 SERPINA5P05154 406 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 CELA3BP08861 270 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 CCL2P13500 99 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 ZNF12P17014 697 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 IGFBP3P17936 291 aaPredicted RBP5.77□□□□□ -1.49
VPS41-204ENST00000413141 ADRA2CP18825 462 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 SRMP19623 302 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 PSMB1P20618 241 aaKnown RBP5.77□□□□□ -1.49
VPS41-204ENST00000413141 CFL1P23528 166 aaKnown RBP5.77□□□□□ -1.49
VPS41-204ENST00000413141 IL32P24001 234 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 CCKARP32238 428 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 APLNRP35414 380 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 PLP2Q04941 152 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 ST3GAL2Q16842 350 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 CEP78Q5JTW2 689 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 GLYATL3Q5SZD4 288 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 TMEM211Q6ICI0 200 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 SFXN4Q6P4A7 337 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 STAC2Q6ZMT1 411 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 COLCA1Q6ZS62 124 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 LINC00299Q6ZSB3 139 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 Q6ZSR3 168 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 MYPOPQ86VE0 399 aaPredicted RBP5.77□□□□□ -1.49
VPS41-204ENST00000413141 CROCCP3Q8IVE0 287 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 PARP16Q8N5Y8 322 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 WDR31Q8NA23 367 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 PLPP7Q8NBV4 271 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 SLC30A7Q8NEW0 376 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 OR6Q1Q8NGQ2 317 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 OR1J2Q8NGS2 313 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 OR2AE1Q8NHA4 323 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 AP3S1Q92572 193 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 REEP6Q96HR9 211 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 FAM71F1Q96KD3 344 aaPredicted RBP5.77□□□□□ -1.49
VPS41-204ENST00000413141 CNTNAP3BQ96NU0 1288 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 C1QTNF5Q9BXJ0 243 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 CNTNAP3Q9BZ76 1288 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 SLITRK2Q9H156 845 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 MMP27Q9H306 513 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 RGCCQ9H4X1 137 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 SP140LQ9H930 580 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 PLEKHA1Q9HB21 404 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 TCF7L1Q9HCS4 588 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 ZNF275Q9NSD4 429 aaPredicted RBP5.77□□□□□ -1.49
VPS41-204ENST00000413141 TAS2R4Q9NYW5 299 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 JKAMPQ9P055 326 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 CKLFQ9UBR5 152 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 ZNF391Q9UJN7 358 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 FOXJ3Q9UPW0 622 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 AMDHD2Q9Y303 409 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 V9GYS6 101 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 SPTA1P02549 2419 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 GTF3C1Q12789 2109 aa5.77□□□□□ -1.49
VPS41-204ENST00000413141 hCG_38984A0A1B0GV85 526 aa5.76□□□□□ -1.49
VPS41-204ENST00000413141 LOC390937A0A1W2PQ73 354 aa5.76□□□□□ -1.49
VPS41-204ENST00000413141 ANKRD61A6NGH8 418 aa5.76□□□□□ -1.49
VPS41-204ENST00000413141 DHRS7CA6NNS2 312 aa5.76□□□□□ -1.49
VPS41-204ENST00000413141 NOTOA8MTQ0 251 aa5.76□□□□□ -1.49
VPS41-204ENST00000413141 AIPO00170 330 aa5.76□□□□□ -1.49
VPS41-204ENST00000413141 XRCC2O43543 280 aa5.76□□□□□ -1.49
VPS41-204ENST00000413141 ICMTO60725 284 aa5.76□□□□□ -1.49
VPS41-204ENST00000413141 MTRF1O75570 445 aaKnown RBP5.76□□□□□ -1.49
VPS41-204ENST00000413141 MAS1P04201 325 aa5.76□□□□□ -1.49
VPS41-204ENST00000413141 INHBBP09529 407 aa5.76□□□□□ -1.49
VPS41-204ENST00000413141 EPXP11678 715 aa5.76□□□□□ -1.49
VPS41-204ENST00000413141 CBR1P16152 277 aa5.76□□□□□ -1.49
VPS41-204ENST00000413141 ZNF20P17024 532 aa5.76□□□□□ -1.49
VPS41-204ENST00000413141 CCNOP22674 350 aa5.76□□□□□ -1.49
VPS41-204ENST00000413141 PAX7P23759 505 aa5.76□□□□□ -1.49
VPS41-204ENST00000413141 CFPP27918 469 aa5.76□□□□□ -1.49
VPS41-204ENST00000413141 THBS2P35442 1172 aa5.76□□□□□ -1.49
VPS41-204ENST00000413141 WNT5AP41221 380 aa5.76□□□□□ -1.49
VPS41-204ENST00000413141 IDH3GP51553 393 aaPredicted RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms