RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 LHX9Q9NQ69 397 aa12.52□□□□□ -0.41
CLTCL1-201ENST00000412649 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.52□□□□□ -0.41
CLTCL1-201ENST00000412649 A0A1B0GV90 55 aa12.52□□□□□ -0.41
CLTCL1-201ENST00000412649 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.52□□□□□ -0.41
CLTCL1-201ENST00000412649 GNRH1P01148 92 aa12.52□□□□□ -0.41
CLTCL1-201ENST00000412649 SFTPDP35247 375 aa12.52□□□□□ -0.41
CLTCL1-201ENST00000412649 ZIC1Q15915 447 aa12.52□□□□□ -0.41
CLTCL1-201ENST00000412649 PHF19Q5T6S3 580 aa12.52□□□□□ -0.41
CLTCL1-201ENST00000412649 ADAD2Q8NCV1 583 aaKnown RBP12.52□□□□□ -0.41
CLTCL1-201ENST00000412649 OR4D6Q8NGJ1 314 aa12.52□□□□□ -0.41
CLTCL1-201ENST00000412649 RNF128Q8TEB7 428 aa12.52□□□□□ -0.41
CLTCL1-201ENST00000412649 JSRP1Q96MG2 331 aaPredicted RBP12.52□□□□□ -0.41
CLTCL1-201ENST00000412649 SLC5A6Q9Y289 635 aa12.52□□□□□ -0.41
CLTCL1-201ENST00000412649 DOCK4Q8N1I0 1966 aa12.51□□□□□ -0.41
CLTCL1-201ENST00000412649 CCDC163A0A0D9SF12 145 aa12.51□□□□□ -0.41
CLTCL1-201ENST00000412649 MSTNO14793 375 aa12.51□□□□□ -0.41
CLTCL1-201ENST00000412649 ZBTB25P24278 435 aa12.51□□□□□ -0.41
CLTCL1-201ENST00000412649 SKP2Q13309 424 aa12.51□□□□□ -0.41
CLTCL1-201ENST00000412649 OGFOD3Q6PK18 319 aa12.51□□□□□ -0.41
CLTCL1-201ENST00000412649 OR52N5Q8NH56 324 aa12.51□□□□□ -0.41
CLTCL1-201ENST00000412649 CABLES2Q9BTV7 478 aa12.51□□□□□ -0.41
CLTCL1-201ENST00000412649 C1orf198Q9H425 327 aa12.51□□□□□ -0.41
CLTCL1-201ENST00000412649 VSX1Q9NZR4 365 aaPredicted RBP12.51□□□□□ -0.41
CLTCL1-201ENST00000412649 DKKL1Q9UK85 242 aa12.51□□□□□ -0.41
CLTCL1-201ENST00000412649 SLC33A1O00400 549 aaPredicted RBP12.51□□□□□ -0.41
CLTCL1-201ENST00000412649 CTSAP10619 480 aa12.51□□□□□ -0.41
CLTCL1-201ENST00000412649 TMEM33P57088 247 aa12.51□□□□□ -0.41
CLTCL1-201ENST00000412649 ACKR1Q16570 336 aa12.51□□□□□ -0.41
CLTCL1-201ENST00000412649 TMPPEQ6ZT21 453 aa12.51□□□□□ -0.41
CLTCL1-201ENST00000412649 SPACA5Q96QH8 159 aa12.51□□□□□ -0.41
CLTCL1-201ENST00000412649 MAP3K3Q99759 626 aa12.51□□□□□ -0.41
CLTCL1-201ENST00000412649 ABHD6Q9BV23 337 aa12.51□□□□□ -0.41
CLTCL1-201ENST00000412649 OR10A5Q9H207 317 aa12.51□□□□□ -0.41
CLTCL1-201ENST00000412649 ZNF442Q9H7R0 627 aa12.51□□□□□ -0.41
CLTCL1-201ENST00000412649 OLFM2O95897 454 aa12.51□□□□□ -0.41
CLTCL1-201ENST00000412649 ADRA2CP18825 462 aa12.51□□□□□ -0.41
CLTCL1-201ENST00000412649 ZNF74Q16587 644 aa12.51□□□□□ -0.41
CLTCL1-201ENST00000412649 ZNF813Q6ZN06 617 aa12.51□□□□□ -0.41
CLTCL1-201ENST00000412649 ZNF429Q86V71 674 aa12.51□□□□□ -0.41
CLTCL1-201ENST00000412649 ZNF595Q8IYB9 648 aa12.51□□□□□ -0.41
CLTCL1-201ENST00000412649 ZFP62Q8NB50 900 aaPredicted RBP12.51□□□□□ -0.41
CLTCL1-201ENST00000412649 CA5BP1Q8WTZ4 195 aa12.51□□□□□ -0.41
CLTCL1-201ENST00000412649 TDRD15B5MCY1 1934 aaKnown RBP12.51□□□□□ -0.41
CLTCL1-201ENST00000412649 A0A0J9YY10 115 aa12.5□□□□□ -0.41
CLTCL1-201ENST00000412649 RNF222A6NCQ9 220 aa12.5□□□□□ -0.41
CLTCL1-201ENST00000412649 J3QRE1 110 aa12.5□□□□□ -0.41
CLTCL1-201ENST00000412649 ERV3-1Q14264 604 aa12.5□□□□□ -0.41
CLTCL1-201ENST00000412649 LGI3Q8N145 548 aa12.5□□□□□ -0.41
CLTCL1-201ENST00000412649 RNF208Q9H0X6 261 aa12.5□□□□□ -0.41
CLTCL1-201ENST00000412649 B4DGG1 531 aa12.5□□□□□ -0.41
CLTCL1-201ENST00000412649 NPIPB9F8W1W9 429 aa12.5□□□□□ -0.41
CLTCL1-201ENST00000412649 XRCC2O43543 280 aa12.5□□□□□ -0.41
CLTCL1-201ENST00000412649 TNFP01375 233 aa12.5□□□□□ -0.41
CLTCL1-201ENST00000412649 METAP1P53582 386 aa12.5□□□□□ -0.41
CLTCL1-201ENST00000412649 MRPS34P82930 218 aaKnown RBP12.5□□□□□ -0.41
CLTCL1-201ENST00000412649 POU3F1Q03052 451 aaPredicted RBP12.5□□□□□ -0.41
CLTCL1-201ENST00000412649 ARTNQ5T4W7 220 aa12.5□□□□□ -0.41
CLTCL1-201ENST00000412649 CLEC18BQ6UXF7 455 aa12.5□□□□□ -0.41
CLTCL1-201ENST00000412649 CREBZFQ9NS37 354 aa12.5□□□□□ -0.41
CLTCL1-201ENST00000412649 PADI1Q9ULC6 663 aa12.5□□□□□ -0.41
CLTCL1-201ENST00000412649 B9D1Q9UPM9 204 aa12.5□□□□□ -0.41
CLTCL1-201ENST00000412649 PRSS37A4D1T9 235 aa12.5□□□□□ -0.41
CLTCL1-201ENST00000412649 SULT1A2P50226 295 aa12.5□□□□□ -0.41
CLTCL1-201ENST00000412649 CD81P60033 236 aa12.5□□□□□ -0.41
CLTCL1-201ENST00000412649 HABP2Q14520 560 aaPredicted RBP12.5□□□□□ -0.41
CLTCL1-201ENST00000412649 DHRS11Q6UWP2 260 aa12.5□□□□□ -0.41
CLTCL1-201ENST00000412649 CDC20BQ86Y33 519 aa12.5□□□□□ -0.41
CLTCL1-201ENST00000412649 TMEM104Q8NE00 496 aa12.5□□□□□ -0.41
CLTCL1-201ENST00000412649 ZNF681Q96N22 645 aa12.5□□□□□ -0.41
CLTCL1-201ENST00000412649 DEFB118Q96PH6 123 aa12.5□□□□□ -0.41
CLTCL1-201ENST00000412649 ZNF2Q9BSG1 426 aaPredicted RBP12.5□□□□□ -0.41
CLTCL1-201ENST00000412649 PRR13Q9NZ81 148 aa12.5□□□□□ -0.41
CLTCL1-201ENST00000412649 FIGNL2A6NMB9 653 aa12.5□□□□□ -0.41
CLTCL1-201ENST00000412649 CD74P04233 296 aa12.5□□□□□ -0.41
CLTCL1-201ENST00000412649 RCC1P18754 421 aaPredicted RBP12.5□□□□□ -0.41
CLTCL1-201ENST00000412649 DUSP1P28562 367 aa12.5□□□□□ -0.41
CLTCL1-201ENST00000412649 Q7L0L9 218 aa12.5□□□□□ -0.41
CLTCL1-201ENST00000412649 OR4N2Q8NGD1 307 aa12.5□□□□□ -0.41
CLTCL1-201ENST00000412649 CPNE4Q96A23 557 aaPredicted RBP12.5□□□□□ -0.41
CLTCL1-201ENST00000412649 INTS12Q96CB8 462 aaKnown RBP12.5□□□□□ -0.41
CLTCL1-201ENST00000412649 KIR3DX1Q9H7L2 352 aa12.5□□□□□ -0.41
CLTCL1-201ENST00000412649 LRP12Q9Y561 859 aa12.5□□□□□ -0.41
CLTCL1-201ENST00000412649 BRCA1P38398 1863 aaKnown RBP12.5□□□□□ -0.41
CLTCL1-201ENST00000412649 TRBV5-5A0A0J9YX44 114 aa12.49□□□□□ -0.41
CLTCL1-201ENST00000412649 ZFP92A6NM28 416 aa12.49□□□□□ -0.41
CLTCL1-201ENST00000412649 PPP5D1E7EU14 171 aa12.49□□□□□ -0.41
CLTCL1-201ENST00000412649 NKX2-2O95096 273 aa12.49□□□□□ -0.41
CLTCL1-201ENST00000412649 THY1P04216 161 aa12.49□□□□□ -0.41
CLTCL1-201ENST00000412649 HEXAP06865 529 aa12.49□□□□□ -0.41
CLTCL1-201ENST00000412649 RPS11P62280 158 aaKnown RBP eCLIP12.49□□□□□ -0.41
CLTCL1-201ENST00000412649 CMTM1Q8IZ96 169 aa12.49□□□□□ -0.41
CLTCL1-201ENST00000412649 LILRB2Q8N423 598 aa12.49□□□□□ -0.41
CLTCL1-201ENST00000412649 LPAR4Q99677 370 aa12.49□□□□□ -0.41
CLTCL1-201ENST00000412649 MBNL1Q9NR56 388 aaKnown RBP12.49□□□□□ -0.41
CLTCL1-201ENST00000412649 TUBG2Q9NRH3 451 aa12.49□□□□□ -0.41
CLTCL1-201ENST00000412649 KLK13Q9UKR3 277 aa12.49□□□□□ -0.41
CLTCL1-201ENST00000412649 UBE2CO00762 179 aa12.49□□□□□ -0.41
CLTCL1-201ENST00000412649 KLF8O95600 359 aaPredicted RBP12.49□□□□□ -0.41
CLTCL1-201ENST00000412649 LPAR6P43657 344 aa12.49□□□□□ -0.41
CLTCL1-201ENST00000412649 ADIRFQ15847 76 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms