RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 SERPINA1P01009 418 aa13.84□□□□□ -0.19
MRPL55-220ENST00000411464 IGHV4-59P01825 116 aa13.84□□□□□ -0.19
MRPL55-220ENST00000411464 H1F0P07305 194 aaKnown RBP13.84□□□□□ -0.19
MRPL55-220ENST00000411464 CA6P23280 308 aa13.84□□□□□ -0.19
MRPL55-220ENST00000411464 IER3P46695 156 aa13.84□□□□□ -0.19
MRPL55-220ENST00000411464 LIPEQ05469 1076 aa13.84□□□□□ -0.19
MRPL55-220ENST00000411464 TRAP1Q12931 704 aaKnown RBP13.84□□□□□ -0.19
MRPL55-220ENST00000411464 DGCR6Q14129 220 aa13.84□□□□□ -0.19
MRPL55-220ENST00000411464 KRTAP27-1Q3LI81 207 aa13.84□□□□□ -0.19
MRPL55-220ENST00000411464 SLC36A3Q495N2 470 aa13.84□□□□□ -0.19
MRPL55-220ENST00000411464 FGD3Q5JSP0 725 aa13.84□□□□□ -0.19
MRPL55-220ENST00000411464 CFAP77Q6ZQR2 320 aa13.84□□□□□ -0.19
MRPL55-220ENST00000411464 NAA40Q86UY6 237 aa13.84□□□□□ -0.19
MRPL55-220ENST00000411464 ERMAPQ96PL5 475 aaPredicted RBP13.84□□□□□ -0.19
MRPL55-220ENST00000411464 RASSF4Q9H2L5 321 aa13.84□□□□□ -0.19
MRPL55-220ENST00000411464 DPAGT1Q9H3H5 408 aa13.84□□□□□ -0.19
MRPL55-220ENST00000411464 GMPR2Q9P2T1 348 aaKnown RBP13.84□□□□□ -0.19
MRPL55-220ENST00000411464 B9D1Q9UPM9 204 aa13.84□□□□□ -0.19
MRPL55-220ENST00000411464 IGLV1-36A0A0B4J1U3 117 aa13.83□□□□□ -0.2
MRPL55-220ENST00000411464 UNC119BA6NIH7 251 aa13.83□□□□□ -0.2
MRPL55-220ENST00000411464 SLC22A31A6NKX4 558 aa13.83□□□□□ -0.2
MRPL55-220ENST00000411464 GMDSO60547 372 aa13.83□□□□□ -0.2
MRPL55-220ENST00000411464 PPP1R3DO95685 299 aa13.83□□□□□ -0.2
MRPL55-220ENST00000411464 RENP00797 406 aa13.83□□□□□ -0.2
MRPL55-220ENST00000411464 GGT2P36268 569 aa13.83□□□□□ -0.2
MRPL55-220ENST00000411464 OMPP47874 163 aa13.83□□□□□ -0.2
MRPL55-220ENST00000411464 TPTEP56180 551 aa13.83□□□□□ -0.2
MRPL55-220ENST00000411464 ARF6P62330 175 aa13.83□□□□□ -0.2
MRPL55-220ENST00000411464 HOXA4Q00056 320 aaPredicted RBP13.83□□□□□ -0.2
MRPL55-220ENST00000411464 SF3A3Q12874 501 aaKnown RBP eCLIP13.83□□□□□ -0.27e-7■■■□□ 18.1
MRPL55-220ENST00000411464 SLC18B1Q6NT16 456 aa13.83□□□□□ -0.2
MRPL55-220ENST00000411464 SMARCD3Q6STE5 483 aa13.83□□□□□ -0.2
MRPL55-220ENST00000411464 LINC00346Q8IVM7 164 aa13.83□□□□□ -0.2
MRPL55-220ENST00000411464 SLC15A3Q8IY34 581 aa13.83□□□□□ -0.2
MRPL55-220ENST00000411464 OR6V1Q8N148 313 aa13.83□□□□□ -0.2
MRPL55-220ENST00000411464 PLPP7Q8NBV4 271 aa13.83□□□□□ -0.2
MRPL55-220ENST00000411464 SLC26A10Q8NG04 563 aa13.83□□□□□ -0.2
MRPL55-220ENST00000411464 RCN3Q96D15 328 aa13.83□□□□□ -0.2
MRPL55-220ENST00000411464 SIRPDQ9H106 197 aa13.83□□□□□ -0.2
MRPL55-220ENST00000411464 FAM96BQ9Y3D0 163 aa13.83□□□□□ -0.2
MRPL55-220ENST00000411464 CAPN7Q9Y6W3 813 aa13.83□□□□□ -0.2
MRPL55-220ENST00000411464 A0A0U1RQK1 487 aa13.82□□□□□ -0.2
MRPL55-220ENST00000411464 OOEPA6NGQ2 149 aa13.82□□□□□ -0.2
MRPL55-220ENST00000411464 CD300LBA8K4G0 201 aa13.82□□□□□ -0.2
MRPL55-220ENST00000411464 ECDO95905 644 aaPredicted RBP13.82□□□□□ -0.2
MRPL55-220ENST00000411464 HLA-DQA2P01906 255 aa13.82□□□□□ -0.2
MRPL55-220ENST00000411464 PROK1P58294 105 aa13.82□□□□□ -0.2
MRPL55-220ENST00000411464 FXYD6P3P58550 94 aa13.82□□□□□ -0.2
MRPL55-220ENST00000411464 C11orf91Q3C1V1 193 aa13.82□□□□□ -0.2
MRPL55-220ENST00000411464 GDPGP1Q6ZNW5 385 aa13.82□□□□□ -0.2
MRPL55-220ENST00000411464 BTN2A1Q7KYR7 527 aa13.82□□□□□ -0.2
MRPL55-220ENST00000411464 TSEN54Q7Z6J9 526 aaKnown RBP13.82□□□□□ -0.2
MRPL55-220ENST00000411464 FAM162AQ96A26 154 aa13.82□□□□□ -0.2
MRPL55-220ENST00000411464 NMNAT3Q96T66 252 aa13.82□□□□□ -0.2
MRPL55-220ENST00000411464 ADAT1Q9BUB4 502 aaKnown RBP13.82□□□□□ -0.2
MRPL55-220ENST00000411464 SMURF1Q9HCE7 757 aa13.82□□□□□ -0.2
MRPL55-220ENST00000411464 C1orf123Q9NWV4 160 aa13.82□□□□□ -0.2
MRPL55-220ENST00000411464 GGT3PA6NGU5 568 aa13.81□□□□□ -0.2
MRPL55-220ENST00000411464 GYPAP02724 150 aa13.81□□□□□ -0.2
MRPL55-220ENST00000411464 GRPP07492 148 aa13.81□□□□□ -0.2
MRPL55-220ENST00000411464 LDLRAD3Q86YD5 345 aa13.81□□□□□ -0.2
MRPL55-220ENST00000411464 C1QL4Q86Z23 238 aa13.81□□□□□ -0.2
MRPL55-220ENST00000411464 PDZD9Q8IXQ8 264 aa13.81□□□□□ -0.2
MRPL55-220ENST00000411464 ZSCAN4Q8NAM6 433 aaPredicted RBP13.81□□□□□ -0.2
MRPL55-220ENST00000411464 LRTOMTQ8WZ04 291 aa13.81□□□□□ -0.2
MRPL55-220ENST00000411464 SPTSSAQ969W0 71 aa13.81□□□□□ -0.2
MRPL55-220ENST00000411464 NSRP1Q9H0G5 558 aaKnown RBP13.81□□□□□ -0.2
MRPL55-220ENST00000411464 CNTD2Q9H8S5 307 aa13.81□□□□□ -0.2
MRPL55-220ENST00000411464 RPRD1BQ9NQG5 326 aaKnown RBP13.81□□□□□ -0.2
MRPL55-220ENST00000411464 CYB5R1Q9UHQ9 305 aa13.81□□□□□ -0.2
MRPL55-220ENST00000411464 TRBV4-1A0A0J9YWV2 114 aa13.8□□□□□ -0.2
MRPL55-220ENST00000411464 A6NLC8 198 aa13.8□□□□□ -0.2
MRPL55-220ENST00000411464 M0R135 149 aa13.8□□□□□ -0.2
MRPL55-220ENST00000411464 DVL1O14640 695 aa13.8□□□□□ -0.2
MRPL55-220ENST00000411464 OR10H3O60404 316 aa13.8□□□□□ -0.2
MRPL55-220ENST00000411464 PTBP3O95758 552 aaKnown RBP13.8□□□□□ -0.2
MRPL55-220ENST00000411464 RHCEP18577 417 aa13.8□□□□□ -0.2
MRPL55-220ENST00000411464 NOS3P29474 1203 aa13.8□□□□□ -0.2
MRPL55-220ENST00000411464 SLC6A6P31641 620 aa13.8□□□□□ -0.2
MRPL55-220ENST00000411464 MZT1Q08AG7 82 aa13.8□□□□□ -0.2
MRPL55-220ENST00000411464 KRT72Q14CN4 511 aa13.8□□□□□ -0.2
MRPL55-220ENST00000411464 RFX4Q33E94 735 aa13.8□□□□□ -0.2
MRPL55-220ENST00000411464 SPERTQ8NA61 448 aa13.8□□□□□ -0.2
MRPL55-220ENST00000411464 OR4K13Q8NH42 304 aa13.8□□□□□ -0.2
MRPL55-220ENST00000411464 OR52J3Q8NH60 311 aa13.8□□□□□ -0.2
MRPL55-220ENST00000411464 FAM110DQ8TAY7 271 aaPredicted RBP13.8□□□□□ -0.2
MRPL55-220ENST00000411464 FANK1Q8TC84 345 aa13.8□□□□□ -0.2
MRPL55-220ENST00000411464 ZNF799Q96GE5 643 aa13.8□□□□□ -0.2
MRPL55-220ENST00000411464 HOPXQ9BPY8 73 aaPredicted RBP13.8□□□□□ -0.2
MRPL55-220ENST00000411464 PNRC2Q9NPJ4 139 aaKnown RBP13.8□□□□□ -0.2
MRPL55-220ENST00000411464 MRPL15Q9P015 296 aaKnown RBP13.8□□□□□ -0.2
MRPL55-220ENST00000411464 NDUFAF4Q9P032 175 aa13.8□□□□□ -0.2
MRPL55-220ENST00000411464 CAB39Q9Y376 341 aaPredicted RBP13.8□□□□□ -0.2
MRPL55-220ENST00000411464 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.79□□□□□ -0.2
MRPL55-220ENST00000411464 A0A1B0GVI7 797 aa13.79□□□□□ -0.2
MRPL55-220ENST00000411464 hCG_1807616A0A1W2PRN6 198 aa13.79□□□□□ -0.2
MRPL55-220ENST00000411464 BTBD17A6NE02 478 aa13.79□□□□□ -0.2
MRPL55-220ENST00000411464 ARPC3O15145 178 aa13.79□□□□□ -0.2
MRPL55-220ENST00000411464 SLC22A2O15244 555 aa13.79□□□□□ -0.2
MRPL55-220ENST00000411464 TSPAN15O95858 294 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms