RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 ZNF254O75437 659 aa9.28□□□□□ -0.92
CHMP3-205ENST00000409810 SBK2P0C263 348 aa9.28□□□□□ -0.92
CHMP3-205ENST00000409810 SLC2A1P11166 492 aa9.28□□□□□ -0.92
CHMP3-205ENST00000409810 ATP6V1E1P36543 226 aa9.28□□□□□ -0.92
CHMP3-205ENST00000409810 CRYBB2P43320 205 aa9.28□□□□□ -0.92
CHMP3-205ENST00000409810 GPR6P46095 362 aaPredicted RBP9.28□□□□□ -0.92
CHMP3-205ENST00000409810 RIDAP52758 137 aaKnown RBP9.28□□□□□ -0.92
CHMP3-205ENST00000409810 TMEM33P57088 247 aa9.28□□□□□ -0.92
CHMP3-205ENST00000409810 ZNF121P58317 390 aaPredicted RBP9.28□□□□□ -0.92
CHMP3-205ENST00000409810 PSMA6P60900 246 aaKnown RBP9.28□□□□□ -0.92
CHMP3-205ENST00000409810 SNRPGP62308 76 aaKnown RBP9.28□□□□□ -0.92
CHMP3-205ENST00000409810 TNFAIP6P98066 277 aaPredicted RBP9.28□□□□□ -0.92
CHMP3-205ENST00000409810 LOXL1Q08397 574 aaPredicted RBP9.28□□□□□ -0.92
CHMP3-205ENST00000409810 CDK5R2Q13319 367 aa9.28□□□□□ -0.92
CHMP3-205ENST00000409810 SNCBQ16143 134 aa9.28□□□□□ -0.92
CHMP3-205ENST00000409810 HFEQ30201 348 aa9.28□□□□□ -0.92
CHMP3-205ENST00000409810 ZNF829Q3KNS6 432 aaPredicted RBP9.28□□□□□ -0.92
CHMP3-205ENST00000409810 GLYATL3Q5SZD4 288 aa9.28□□□□□ -0.92
CHMP3-205ENST00000409810 LRRN1Q6UXK5 716 aa9.28□□□□□ -0.92
CHMP3-205ENST00000409810 CLEC9AQ6UXN8 241 aa9.28□□□□□ -0.92
CHMP3-205ENST00000409810 USP51Q70EK9 711 aa9.28□□□□□ -0.92
CHMP3-205ENST00000409810 FAM57BQ71RH2 274 aa9.28□□□□□ -0.92
CHMP3-205ENST00000409810 NAA40Q86UY6 237 aa9.28□□□□□ -0.92
CHMP3-205ENST00000409810 ZNF679Q8IYX0 411 aa9.28□□□□□ -0.92
CHMP3-205ENST00000409810 PACRGLQ8N7B6 248 aa9.28□□□□□ -0.92
CHMP3-205ENST00000409810 OR8G5Q8NG78 346 aa9.28□□□□□ -0.92
CHMP3-205ENST00000409810 OR2Z1Q8NG97 314 aa9.28□□□□□ -0.92
CHMP3-205ENST00000409810 OR51G2Q8NGK0 314 aa9.28□□□□□ -0.92
CHMP3-205ENST00000409810 GTF3AQ92664 365 aaKnown RBP9.28□□□□□ -0.92
CHMP3-205ENST00000409810 PGAM5Q96HS1 289 aa9.28□□□□□ -0.92
CHMP3-205ENST00000409810 MBOAT4Q96T53 435 aa9.28□□□□□ -0.92
CHMP3-205ENST00000409810 AMELYQ99218 206 aa9.28□□□□□ -0.92
CHMP3-205ENST00000409810 SLC29A1Q99808 456 aa9.28□□□□□ -0.92
CHMP3-205ENST00000409810 APOL4Q9BPW4 351 aa9.28□□□□□ -0.92
CHMP3-205ENST00000409810 SLC22A4Q9H015 551 aa9.28□□□□□ -0.92
CHMP3-205ENST00000409810 VCXQ9H320 206 aa9.28□□□□□ -0.92
CHMP3-205ENST00000409810 RGCCQ9H4X1 137 aa9.28□□□□□ -0.92
CHMP3-205ENST00000409810 ADGRL4Q9HBW9 690 aa9.28□□□□□ -0.92
CHMP3-205ENST00000409810 TMEM100Q9NV29 134 aa9.28□□□□□ -0.92
CHMP3-205ENST00000409810 CLN6Q9NWW5 311 aa9.28□□□□□ -0.92
CHMP3-205ENST00000409810 IKZF2Q9UKS7 526 aa9.28□□□□□ -0.92
CHMP3-205ENST00000409810 KLHDC2Q9Y2U9 406 aa9.28□□□□□ -0.92
CHMP3-205ENST00000409810 LRP12Q9Y561 859 aa9.28□□□□□ -0.92
CHMP3-205ENST00000409810 TLN2Q9Y4G6 2542 aa9.28□□□□□ -0.92
CHMP3-205ENST00000409810 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.27□□□□□ -0.924e-7■■■■□ 26.6
CHMP3-205ENST00000409810 ACOD1A6NK06 481 aa9.27□□□□□ -0.93
CHMP3-205ENST00000409810 CLDN25C9JDP6 229 aa9.27□□□□□ -0.93
CHMP3-205ENST00000409810 CDC14BO60729 498 aa9.27□□□□□ -0.93
CHMP3-205ENST00000409810 HEXAP06865 529 aa9.27□□□□□ -0.93
CHMP3-205ENST00000409810 DCTDP32321 178 aa9.27□□□□□ -0.93
CHMP3-205ENST00000409810 DDOSTP39656 456 aa9.27□□□□□ -0.93
CHMP3-205ENST00000409810 CHN2P52757 468 aa9.27□□□□□ -0.93
CHMP3-205ENST00000409810 CXCR4P61073 352 aa9.27□□□□□ -0.93
CHMP3-205ENST00000409810 ROM1Q03395 351 aa9.27□□□□□ -0.93
CHMP3-205ENST00000409810 ZNF92Q03936 586 aa9.27□□□□□ -0.93
CHMP3-205ENST00000409810 EGR3Q06889 387 aa9.27□□□□□ -0.93
CHMP3-205ENST00000409810 RIN1Q13671 783 aa9.27□□□□□ -0.93
CHMP3-205ENST00000409810 OCLNQ16625 522 aa9.27□□□□□ -0.93
CHMP3-205ENST00000409810 SLC25A30Q5SVS4 291 aa9.27□□□□□ -0.93
CHMP3-205ENST00000409810 ZNF322Q6U7Q0 402 aaPredicted RBP9.27□□□□□ -0.93
CHMP3-205ENST00000409810 GALNT4Q8N4A0 578 aa9.27□□□□□ -0.93
CHMP3-205ENST00000409810 FTMTQ8N4E7 242 aa9.27□□□□□ -0.93
CHMP3-205ENST00000409810 BHLHE23Q8NDY6 225 aa9.27□□□□□ -0.93
CHMP3-205ENST00000409810 OR2AE1Q8NHA4 323 aa9.27□□□□□ -0.93
CHMP3-205ENST00000409810 SPSB4Q96A44 273 aa9.27□□□□□ -0.93
CHMP3-205ENST00000409810 TIMD4Q96H15 378 aa9.27□□□□□ -0.93
CHMP3-205ENST00000409810 REEP6Q96HR9 211 aa9.27□□□□□ -0.93
CHMP3-205ENST00000409810 Q96MT0 163 aa9.27□□□□□ -0.93
CHMP3-205ENST00000409810 OR8B4Q96RC9 309 aa9.27□□□□□ -0.93
CHMP3-205ENST00000409810 MYCBPQ99417 103 aaPredicted RBP9.27□□□□□ -0.93
CHMP3-205ENST00000409810 SLC30A2Q9BRI3 323 aa9.27□□□□□ -0.93
CHMP3-205ENST00000409810 REPIN1Q9BWE0 567 aaKnown RBP9.27□□□□□ -0.93
CHMP3-205ENST00000409810 DCLRE1BQ9H816 532 aa9.27□□□□□ -0.93
CHMP3-205ENST00000409810 MOB1AQ9H8S9 216 aa9.27□□□□□ -0.93
CHMP3-205ENST00000409810 BRD7Q9NPI1 651 aa9.27□□□□□ -0.93
CHMP3-205ENST00000409810 ZNF275Q9NSD4 429 aaPredicted RBP9.27□□□□□ -0.93
CHMP3-205ENST00000409810 MRPL15Q9P015 296 aaKnown RBP9.27□□□□□ -0.93
CHMP3-205ENST00000409810 IL19Q9UHD0 177 aa9.27□□□□□ -0.93
CHMP3-205ENST00000409810 ZNF391Q9UJN7 358 aa9.27□□□□□ -0.93
CHMP3-205ENST00000409810 HIVEP2P31629 2446 aa9.26□□□□□ -0.93
CHMP3-205ENST00000409810 A0A096LNT2 108 aa9.26□□□□□ -0.93
CHMP3-205ENST00000409810 CD300LBA8K4G0 201 aa9.26□□□□□ -0.93
CHMP3-205ENST00000409810 E9PQ18 207 aa9.26□□□□□ -0.93
CHMP3-205ENST00000409810 LYNX1G3V0Z9 82 aa9.26□□□□□ -0.93
CHMP3-205ENST00000409810 IFNL4K9M1U5 179 aa9.26□□□□□ -0.93
CHMP3-205ENST00000409810 SLC16A6O15403 523 aa9.26□□□□□ -0.93
CHMP3-205ENST00000409810 PPIHO43447 177 aaKnown RBP9.26□□□□□ -0.93
CHMP3-205ENST00000409810 KRT8P05787 483 aa9.26□□□□□ -0.93
CHMP3-205ENST00000409810 OR2T7P0C7T2 308 aa9.26□□□□□ -0.93
CHMP3-205ENST00000409810 LYNX1P0DP58 116 aa9.26□□□□□ -0.93
CHMP3-205ENST00000409810 COL8A2P25067 703 aa9.26□□□□□ -0.93
CHMP3-205ENST00000409810 PEX2P28328 305 aa9.26□□□□□ -0.93
CHMP3-205ENST00000409810 MTNR1AP48039 350 aa9.26□□□□□ -0.93
CHMP3-205ENST00000409810 SRP9P49458 86 aaKnown RBP9.26□□□□□ -0.93
CHMP3-205ENST00000409810 HCCSP53701 268 aa9.26□□□□□ -0.93
CHMP3-205ENST00000409810 ACTC1P68032 377 aa9.26□□□□□ -0.93
CHMP3-205ENST00000409810 ACTA1P68133 377 aa9.26□□□□□ -0.93
CHMP3-205ENST00000409810 MZT1Q08AG7 82 aa9.26□□□□□ -0.93
CHMP3-205ENST00000409810 LRRC36Q1X8D7 754 aa9.26□□□□□ -0.93
CHMP3-205ENST00000409810 TMEM249Q2WGJ8 235 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms