RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 CCDC92Q53HC0 331 aaPredicted RBP17.71■□□□□ 0.43
USP39-204ENST00000409766 DCAF10Q5QP82 559 aa17.71■□□□□ 0.43
USP39-204ENST00000409766 DOK3Q7L591 496 aa17.71■□□□□ 0.43
USP39-204ENST00000409766 NAA40Q86UY6 237 aa17.71■□□□□ 0.43
USP39-204ENST00000409766 OR4D10Q8NGI6 311 aa17.71■□□□□ 0.43
USP39-204ENST00000409766 ITFG2Q969R8 447 aa17.71■□□□□ 0.43
USP39-204ENST00000409766 DACT3Q96B18 629 aaPredicted RBP17.71■□□□□ 0.43
USP39-204ENST00000409766 FAM71F1Q96KD3 344 aaPredicted RBP17.71■□□□□ 0.43
USP39-204ENST00000409766 ZNF222Q9UK12 451 aa17.71■□□□□ 0.43
USP39-204ENST00000409766 BOKQ9UMX3 212 aaPredicted RBP17.71■□□□□ 0.43
USP39-204ENST00000409766 PCNX2A6NKB5 2137 aa17.71■□□□□ 0.43
USP39-204ENST00000409766 OR5H15A6NDH6 313 aa17.71■□□□□ 0.42
USP39-204ENST00000409766 BPNT1O95861 308 aa17.71■□□□□ 0.42
USP39-204ENST00000409766 IGLV3-1P01715 115 aa17.71■□□□□ 0.42
USP39-204ENST00000409766 LPLP06858 475 aa17.71■□□□□ 0.42
USP39-204ENST00000409766 ANXA3P12429 323 aa17.71■□□□□ 0.42
USP39-204ENST00000409766 GTF2F2P13984 249 aa17.71■□□□□ 0.42
USP39-204ENST00000409766 POU3F2P20265 443 aaPredicted RBP17.71■□□□□ 0.42
USP39-204ENST00000409766 UNC119Q13432 240 aa17.71■□□□□ 0.42
USP39-204ENST00000409766 ABHD17BQ5VST6 288 aa17.71■□□□□ 0.42
USP39-204ENST00000409766 FAM27BQ5VT28 67 aa17.71■□□□□ 0.42
USP39-204ENST00000409766 METTL11BQ5VVY1 283 aa17.71■□□□□ 0.42
USP39-204ENST00000409766 ABLIM2Q6H8Q1 611 aa17.71■□□□□ 0.42
USP39-204ENST00000409766 PGAP1Q75T13 922 aa17.71■□□□□ 0.42
USP39-204ENST00000409766 OR5AS1Q8N127 324 aa17.71■□□□□ 0.42
USP39-204ENST00000409766 ROBO4Q8WZ75 1007 aa17.71■□□□□ 0.42
USP39-204ENST00000409766 HYLS1Q96M11 299 aa17.71■□□□□ 0.42
USP39-204ENST00000409766 SIGLEC12Q96PQ1 595 aa17.71■□□□□ 0.42
USP39-204ENST00000409766 SCPEP1Q9HB40 452 aa17.71■□□□□ 0.42
USP39-204ENST00000409766 C5orf63A6NC05 138 aa17.7■□□□□ 0.42
USP39-204ENST00000409766 SSNA1O43805 119 aa17.7■□□□□ 0.42
USP39-204ENST00000409766 AKAIN1P0CW23 69 aa17.7■□□□□ 0.42
USP39-204ENST00000409766 OTX1P32242 354 aaPredicted RBP17.7■□□□□ 0.42
USP39-204ENST00000409766 ZNF93P35789 620 aaPredicted RBP17.7■□□□□ 0.42
USP39-204ENST00000409766 ACTBP60709 375 aa17.7■□□□□ 0.42
USP39-204ENST00000409766 ACTG1P63261 375 aa17.7■□□□□ 0.42
USP39-204ENST00000409766 SEZ6L2Q6UXD5 910 aa17.7■□□□□ 0.42
USP39-204ENST00000409766 FBXO17Q96EF6 278 aa17.7■□□□□ 0.42
USP39-204ENST00000409766 FAM173AQ9BQD7 235 aa17.7■□□□□ 0.42
USP39-204ENST00000409766 FAM117AQ9C073 453 aa17.7■□□□□ 0.42
USP39-204ENST00000409766 METTL21EPA6NDL7 271 aa17.69■□□□□ 0.42
USP39-204ENST00000409766 TNFSF15O95150 251 aa17.69■□□□□ 0.42
USP39-204ENST00000409766 CD3DP04234 171 aa17.69■□□□□ 0.42
USP39-204ENST00000409766 VSIG8P0DPA2 414 aa17.69■□□□□ 0.42
USP39-204ENST00000409766 RAD52P43351 418 aa17.69■□□□□ 0.42
USP39-204ENST00000409766 GLDNQ6ZMI3 551 aaPredicted RBP17.69■□□□□ 0.42
USP39-204ENST00000409766 Q6ZTK2 550 aa17.69■□□□□ 0.42
USP39-204ENST00000409766 OR2M7Q8NG81 312 aa17.69■□□□□ 0.42
USP39-204ENST00000409766 MED30Q96HR3 178 aa17.69■□□□□ 0.42
USP39-204ENST00000409766 B3GNT4Q9C0J1 378 aa17.69■□□□□ 0.42
USP39-204ENST00000409766 FBLN5Q9UBX5 448 aa17.69■□□□□ 0.42
USP39-204ENST00000409766 MEIKINA0A087WXM9 373 aa17.69■□□□□ 0.42
USP39-204ENST00000409766 F5H5K5 113 aa17.69■□□□□ 0.42
USP39-204ENST00000409766 RAB27BO00194 218 aa17.69■□□□□ 0.42
USP39-204ENST00000409766 RBMS2Q15434 407 aaKnown RBP17.69■□□□□ 0.42
USP39-204ENST00000409766 GFOD2Q3B7J2 385 aa17.69■□□□□ 0.42
USP39-204ENST00000409766 LAMTOR1Q6IAA8 161 aa17.69■□□□□ 0.42
USP39-204ENST00000409766 RAB12Q6IQ22 244 aa17.69■□□□□ 0.42
USP39-204ENST00000409766 ZNF782Q6ZMW2 699 aaPredicted RBP17.69■□□□□ 0.42
USP39-204ENST00000409766 RNF144BQ7Z419 303 aa17.69■□□□□ 0.42
USP39-204ENST00000409766 ACBD4Q8NC06 268 aa17.69■□□□□ 0.42
USP39-204ENST00000409766 OR14K1Q8NGZ2 314 aa17.69■□□□□ 0.42
USP39-204ENST00000409766 PGAM5Q96HS1 289 aa17.69■□□□□ 0.42
USP39-204ENST00000409766 LYZL4Q96KX0 146 aa17.69■□□□□ 0.42
USP39-204ENST00000409766 SLA2Q9H6Q3 261 aa17.69■□□□□ 0.42
USP39-204ENST00000409766 ZMAT3Q9HA38 289 aaKnown RBP17.69■□□□□ 0.42
USP39-204ENST00000409766 IL17BQ9UHF5 180 aa17.69■□□□□ 0.42
USP39-204ENST00000409766 ELF5Q9UKW6 265 aaPredicted RBP17.69■□□□□ 0.42
USP39-204ENST00000409766 RTTNQ86VV8 2226 aa17.68■□□□□ 0.42
USP39-204ENST00000409766 WIPF3A6NGB9 483 aa17.68■□□□□ 0.42
USP39-204ENST00000409766 ANXA7P20073 488 aaKnown RBP17.68■□□□□ 0.42
USP39-204ENST00000409766 CASRP41180 1078 aa17.68■□□□□ 0.42
USP39-204ENST00000409766 ZP1P60852 638 aa17.68■□□□□ 0.42
USP39-204ENST00000409766 STEAP1BQ6NZ63 245 aa17.68■□□□□ 0.42
USP39-204ENST00000409766 ANGPTL5Q86XS5 388 aa17.68■□□□□ 0.42
USP39-204ENST00000409766 CDH26Q8IXH8 852 aa17.68■□□□□ 0.42
USP39-204ENST00000409766 SLCO5A1Q9H2Y9 848 aa17.68■□□□□ 0.42
USP39-204ENST00000409766 CRLF2Q9HC73 371 aa17.68■□□□□ 0.42
USP39-204ENST00000409766 ING4Q9UNL4 249 aa17.68■□□□□ 0.42
USP39-204ENST00000409766 A0A0U1RQV5 110 aa17.67■□□□□ 0.42
USP39-204ENST00000409766 FCER2P06734 321 aa17.67■□□□□ 0.42
USP39-204ENST00000409766 ITGA3P26006 1051 aa17.67■□□□□ 0.42
USP39-204ENST00000409766 SPEM2Q0P670 501 aa17.67■□□□□ 0.42
USP39-204ENST00000409766 AAED1Q7RTV5 226 aa17.67■□□□□ 0.42
USP39-204ENST00000409766 GABRG1Q8N1C3 465 aa17.67■□□□□ 0.42
USP39-204ENST00000409766 GPR137CQ8N3F9 429 aa17.67■□□□□ 0.42
USP39-204ENST00000409766 AQP3Q92482 292 aa17.67■□□□□ 0.42
USP39-204ENST00000409766 DVL3Q92997 716 aaPredicted RBP17.67■□□□□ 0.42
USP39-204ENST00000409766 NKD1Q969G9 470 aa17.67■□□□□ 0.42
USP39-204ENST00000409766 CPNE4Q96A23 557 aaPredicted RBP17.67■□□□□ 0.42
USP39-204ENST00000409766 SPACA5Q96QH8 159 aa17.67■□□□□ 0.42
USP39-204ENST00000409766 SEC22CQ9BRL7 303 aa17.67■□□□□ 0.42
USP39-204ENST00000409766 ZNF703Q9H7S9 590 aaPredicted RBP17.67■□□□□ 0.42
USP39-204ENST00000409766 NPDC1Q9NQX5 325 aaPredicted RBP17.67■□□□□ 0.42
USP39-204ENST00000409766 PLEK2Q9NYT0 353 aa17.67■□□□□ 0.42
USP39-204ENST00000409766 TMEM14DPA8MWL7 114 aa17.67■□□□□ 0.42
USP39-204ENST00000409766 STMND1H3BQB6 276 aa17.67■□□□□ 0.42
USP39-204ENST00000409766 PYCARD-AS1I3L0S3 204 aa17.67■□□□□ 0.42
USP39-204ENST00000409766 LINC01387J3KSC0 135 aa17.67■□□□□ 0.42
USP39-204ENST00000409766 TNFRSF10AO00220 468 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms