RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 FOXRED1Q96CU9 486 aaPredicted RBP12.34□□□□□ -0.43
LIMS2-206ENST00000409754 HAVCR1Q96D42 359 aa12.34□□□□□ -0.43
LIMS2-206ENST00000409754 S100A16Q96FQ6 103 aaKnown RBP12.34□□□□□ -0.43
LIMS2-206ENST00000409754 PGAM5Q96HS1 289 aa12.34□□□□□ -0.43
LIMS2-206ENST00000409754 THAP7Q9BT49 309 aaPredicted RBP12.34□□□□□ -0.43
LIMS2-206ENST00000409754 C11orf54Q9H0W9 315 aaPredicted RBP12.34□□□□□ -0.43
LIMS2-206ENST00000409754 CALHM2Q9HA72 323 aa12.34□□□□□ -0.43
LIMS2-206ENST00000409754 GP6Q9HCN6 339 aa12.34□□□□□ -0.43
LIMS2-206ENST00000409754 GPR84Q9NQS5 396 aa12.34□□□□□ -0.43
LIMS2-206ENST00000409754 SLC17A5Q9NRA2 495 aa12.34□□□□□ -0.43
LIMS2-206ENST00000409754 ZNF319Q9P2F9 582 aa12.34□□□□□ -0.43
LIMS2-206ENST00000409754 ZNF175Q9Y473 711 aa12.34□□□□□ -0.43
LIMS2-206ENST00000409754 TIMM10BQ9Y5J6 103 aa12.34□□□□□ -0.43
LIMS2-206ENST00000409754 ZNF407Q9C0G0 2248 aa12.34□□□□□ -0.43
LIMS2-206ENST00000409754 A0A0U1RQV5 110 aa12.33□□□□□ -0.43
LIMS2-206ENST00000409754 LINC00854A0A1B0GVQ3 168 aa12.33□□□□□ -0.43
LIMS2-206ENST00000409754 LOC390937A0A1W2PQ73 354 aa12.33□□□□□ -0.43
LIMS2-206ENST00000409754 F5H5K5 113 aa12.33□□□□□ -0.43
LIMS2-206ENST00000409754 SYNGR3O43761 229 aa12.33□□□□□ -0.43
LIMS2-206ENST00000409754 SSX4O60224 188 aa12.33□□□□□ -0.43
LIMS2-206ENST00000409754 FARS2O95363 451 aaKnown RBP12.33□□□□□ -0.43
LIMS2-206ENST00000409754 IGLV3-1P01715 115 aa12.33□□□□□ -0.43
LIMS2-206ENST00000409754 ITGA5P08648 1049 aa12.33□□□□□ -0.43
LIMS2-206ENST00000409754 CRYGSP22914 178 aa12.33□□□□□ -0.43
LIMS2-206ENST00000409754 MNDAP41218 407 aa12.33□□□□□ -0.43
LIMS2-206ENST00000409754 INPP1P49441 399 aa12.33□□□□□ -0.43
LIMS2-206ENST00000409754 C11orf91Q3C1V1 193 aa12.33□□□□□ -0.43
LIMS2-206ENST00000409754 ZNF529Q6P280 563 aa12.33□□□□□ -0.43
LIMS2-206ENST00000409754 ZADH2Q8N4Q0 377 aa12.33□□□□□ -0.43
LIMS2-206ENST00000409754 PLPP7Q8NBV4 271 aa12.33□□□□□ -0.43
LIMS2-206ENST00000409754 OR51A2Q8NGJ7 313 aa12.33□□□□□ -0.43
LIMS2-206ENST00000409754 OR6M1Q8NGM8 313 aa12.33□□□□□ -0.43
LIMS2-206ENST00000409754 TRIM63Q969Q1 353 aa12.33□□□□□ -0.43
LIMS2-206ENST00000409754 ADAT3Q96EY9 351 aaPredicted RBP12.33□□□□□ -0.43
LIMS2-206ENST00000409754 SLC7A10Q9NS82 523 aa12.33□□□□□ -0.43
LIMS2-206ENST00000409754 RHBDL2Q9NX52 303 aa12.33□□□□□ -0.43
LIMS2-206ENST00000409754 LUZP4Q9P127 313 aa12.33□□□□□ -0.43
LIMS2-206ENST00000409754 N6AMT1Q9Y5N5 214 aa12.33□□□□□ -0.43
LIMS2-206ENST00000409754 LOC100289279A0A1B0GTE1 492 aa12.33□□□□□ -0.44
LIMS2-206ENST00000409754 ZNF587BE7ETH6 402 aa12.33□□□□□ -0.44
LIMS2-206ENST00000409754 M0R135 149 aa12.33□□□□□ -0.44
LIMS2-206ENST00000409754 GSTZ1O43708 216 aaPredicted RBP12.33□□□□□ -0.44
LIMS2-206ENST00000409754 FCGR2AP12318 317 aa12.33□□□□□ -0.44
LIMS2-206ENST00000409754 ZNF20P17024 532 aa12.33□□□□□ -0.44
LIMS2-206ENST00000409754 ZNF32P17041 273 aa12.33□□□□□ -0.44
LIMS2-206ENST00000409754 HTR2CP28335 458 aa12.33□□□□□ -0.44
LIMS2-206ENST00000409754 BDKRB2P30411 391 aa12.33□□□□□ -0.44
LIMS2-206ENST00000409754 SPOCK1Q08629 439 aa12.33□□□□□ -0.44
LIMS2-206ENST00000409754 KRTAP27-1Q3LI81 207 aa12.33□□□□□ -0.44
LIMS2-206ENST00000409754 C1orf100Q5SVJ3 147 aa12.33□□□□□ -0.44
LIMS2-206ENST00000409754 MZT2BQ6NZ67 158 aa12.33□□□□□ -0.44
LIMS2-206ENST00000409754 DRAM2Q6UX65 266 aa12.33□□□□□ -0.44
LIMS2-206ENST00000409754 ZNF813Q6ZN06 617 aa12.33□□□□□ -0.44
LIMS2-206ENST00000409754 SLC16A14Q7RTX9 510 aa12.33□□□□□ -0.44
LIMS2-206ENST00000409754 LYPD6Q86Y78 171 aa12.33□□□□□ -0.44
LIMS2-206ENST00000409754 CCDC54Q8NEL0 328 aa12.33□□□□□ -0.44
LIMS2-206ENST00000409754 OR1M1Q8NGA1 313 aa12.33□□□□□ -0.44
LIMS2-206ENST00000409754 OR51D1Q8NGF3 324 aa12.33□□□□□ -0.44
LIMS2-206ENST00000409754 OR5D14Q8NGL3 314 aa12.33□□□□□ -0.44
LIMS2-206ENST00000409754 OR1F12Q8NHA8 337 aa12.33□□□□□ -0.44
LIMS2-206ENST00000409754 SLC25A28Q96A46 364 aa12.33□□□□□ -0.44
LIMS2-206ENST00000409754 APH1AQ96BI3 265 aa12.33□□□□□ -0.44
LIMS2-206ENST00000409754 FAM3DQ96BQ1 224 aa12.33□□□□□ -0.44
LIMS2-206ENST00000409754 ZNF799Q96GE5 643 aa12.33□□□□□ -0.44
LIMS2-206ENST00000409754 PRDM14Q9GZV8 571 aa12.33□□□□□ -0.44
LIMS2-206ENST00000409754 DNAJC13O75165 2243 aa12.32□□□□□ -0.44
LIMS2-206ENST00000409754 SHANK1Q9Y566 2161 aa12.32□□□□□ -0.44
LIMS2-206ENST00000409754 OR6C6A6NF89 314 aa12.32□□□□□ -0.44
LIMS2-206ENST00000409754 SLC22A20A6NK97 555 aa12.32□□□□□ -0.44
LIMS2-206ENST00000409754 AQP7O14520 342 aa12.32□□□□□ -0.44
LIMS2-206ENST00000409754 EEF1E1O43324 174 aaKnown RBP12.32□□□□□ -0.44
LIMS2-206ENST00000409754 SULT1B1O43704 296 aa12.32□□□□□ -0.44
LIMS2-206ENST00000409754 ANOS1P23352 680 aa12.32□□□□□ -0.44
LIMS2-206ENST00000409754 GNALP38405 381 aa12.32□□□□□ -0.44
LIMS2-206ENST00000409754 MAP2K3P46734 347 aa12.32□□□□□ -0.44
LIMS2-206ENST00000409754 SLC6A9P48067 706 aa12.32□□□□□ -0.44
LIMS2-206ENST00000409754 POU3F4P49335 361 aa12.32□□□□□ -0.44
LIMS2-206ENST00000409754 TPTEP56180 551 aa12.32□□□□□ -0.44
LIMS2-206ENST00000409754 ZNF774Q6NX45 483 aa12.32□□□□□ -0.44
LIMS2-206ENST00000409754 Q6ZS92 163 aa12.32□□□□□ -0.44
LIMS2-206ENST00000409754 Q6ZSR3 168 aa12.32□□□□□ -0.44
LIMS2-206ENST00000409754 ZNF627Q7L945 461 aa12.32□□□□□ -0.44
LIMS2-206ENST00000409754 COMMD2Q86X83 199 aa12.32□□□□□ -0.44
LIMS2-206ENST00000409754 SKA3Q8IX90 412 aa12.32□□□□□ -0.44
LIMS2-206ENST00000409754 C15orf40Q8WUR7 153 aa12.32□□□□□ -0.44
LIMS2-206ENST00000409754 ZC3HAV1LQ96H79 300 aaKnown RBP12.32□□□□□ -0.44
LIMS2-206ENST00000409754 OR2H1Q9GZK4 316 aa12.32□□□□□ -0.44
LIMS2-206ENST00000409754 TMEM138Q9NPI0 162 aa12.32□□□□□ -0.44
LIMS2-206ENST00000409754 MRPS7Q9Y2R9 242 aaKnown RBP12.32□□□□□ -0.44
LIMS2-206ENST00000409754 E9PLN8 166 aa12.31□□□□□ -0.44
LIMS2-206ENST00000409754 LYRM1O43325 122 aa12.31□□□□□ -0.44
LIMS2-206ENST00000409754 LANCL1O43813 399 aa12.31□□□□□ -0.44
LIMS2-206ENST00000409754 TGM6O95932 706 aa12.31□□□□□ -0.44
LIMS2-206ENST00000409754 IGHV3-9P01782 118 aa12.31□□□□□ -0.44
LIMS2-206ENST00000409754 ERCC1P07992 297 aaPredicted RBP12.31□□□□□ -0.44
LIMS2-206ENST00000409754 RAB3AP20336 220 aa12.31□□□□□ -0.44
LIMS2-206ENST00000409754 CAPZA1P52907 286 aa12.31□□□□□ -0.44
LIMS2-206ENST00000409754 ARF1P84077 181 aaKnown RBP12.31□□□□□ -0.44
LIMS2-206ENST00000409754 PSG4Q00888 419 aa12.31□□□□□ -0.44
LIMS2-206ENST00000409754 C2orf76Q3KRA6 126 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms