RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 OR9Q2Q8NGE9 314 aa12.33□□□□□ -0.44
CBX3-203ENST00000409747 UPRTQ96BW1 309 aa12.33□□□□□ -0.44
CBX3-203ENST00000409747 BTBD10Q9BSF8 475 aa12.33□□□□□ -0.44
CBX3-203ENST00000409747 COPS4Q9BT78 406 aa12.33□□□□□ -0.44
CBX3-203ENST00000409747 ADAT1Q9BUB4 502 aaKnown RBP12.33□□□□□ -0.44
CBX3-203ENST00000409747 MUC13Q9H3R2 512 aa12.33□□□□□ -0.44
CBX3-203ENST00000409747 MAGIXQ9H6Y5 334 aa12.33□□□□□ -0.44
CBX3-203ENST00000409747 TRIM36Q9NQ86 728 aa12.33□□□□□ -0.44
CBX3-203ENST00000409747 GGT3PA6NGU5 568 aa12.32□□□□□ -0.44
CBX3-203ENST00000409747 CD300LBA8K4G0 201 aa12.32□□□□□ -0.44
CBX3-203ENST00000409747 OTX1P32242 354 aaPredicted RBP12.32□□□□□ -0.44
CBX3-203ENST00000409747 PMELP40967 661 aa12.32□□□□□ -0.44
CBX3-203ENST00000409747 NPY4RP50391 375 aa12.32□□□□□ -0.44
CBX3-203ENST00000409747 MZT1Q08AG7 82 aa12.32□□□□□ -0.44
CBX3-203ENST00000409747 DBPQ10586 325 aaPredicted RBP12.32□□□□□ -0.44
CBX3-203ENST00000409747 CYP2R1Q6VVX0 501 aa12.32□□□□□ -0.44
CBX3-203ENST00000409747 DCXRQ7Z4W1 244 aa12.32□□□□□ -0.44
CBX3-203ENST00000409747 PIGWQ7Z7B1 504 aa12.32□□□□□ -0.44
CBX3-203ENST00000409747 NAA40Q86UY6 237 aa12.32□□□□□ -0.44
CBX3-203ENST00000409747 ARHGAP24Q8N264 748 aa12.32□□□□□ -0.44
CBX3-203ENST00000409747 LNX2Q8N448 690 aa12.32□□□□□ -0.44
CBX3-203ENST00000409747 SPERTQ8NA61 448 aa12.32□□□□□ -0.44
CBX3-203ENST00000409747 PLPP7Q8NBV4 271 aa12.32□□□□□ -0.44
CBX3-203ENST00000409747 SLC25A28Q96A46 364 aa12.32□□□□□ -0.44
CBX3-203ENST00000409747 MRPL15Q9P015 296 aaKnown RBP12.32□□□□□ -0.44
CBX3-203ENST00000409747 COMMD3-BMI1R4GMX3 469 aa12.32□□□□□ -0.44
CBX3-203ENST00000409747 TVP23AA6NH52 213 aa12.31□□□□□ -0.44
CBX3-203ENST00000409747 CLDN34H7C241 214 aa12.31□□□□□ -0.44
CBX3-203ENST00000409747 SPRY1O43609 319 aaPredicted RBP12.31□□□□□ -0.44
CBX3-203ENST00000409747 FAM20BO75063 409 aa12.31□□□□□ -0.44
CBX3-203ENST00000409747 CA6P23280 308 aa12.31□□□□□ -0.44
CBX3-203ENST00000409747 FMO3P31513 532 aa12.31□□□□□ -0.44
CBX3-203ENST00000409747 ENTPD1P49961 510 aa12.31□□□□□ -0.44
CBX3-203ENST00000409747 BLVRAP53004 296 aa12.31□□□□□ -0.44
CBX3-203ENST00000409747 PRSS12P56730 875 aa12.31□□□□□ -0.44
CBX3-203ENST00000409747 TAF13Q15543 124 aa12.31□□□□□ -0.44
CBX3-203ENST00000409747 ZNF770Q6IQ21 691 aaPredicted RBP12.31□□□□□ -0.44
CBX3-203ENST00000409747 AQP11Q8NBQ7 271 aa12.31□□□□□ -0.44
CBX3-203ENST00000409747 SLC37A3Q8NCC5 494 aa12.31□□□□□ -0.44
CBX3-203ENST00000409747 OR2T33Q8NG76 320 aa12.31□□□□□ -0.44
CBX3-203ENST00000409747 OR10S1Q8NGN2 331 aa12.31□□□□□ -0.44
CBX3-203ENST00000409747 DACT3Q96B18 629 aaPredicted RBP12.31□□□□□ -0.44
CBX3-203ENST00000409747 DDOQ99489 341 aa12.31□□□□□ -0.44
CBX3-203ENST00000409747 NUDT16L1Q9BRJ7 211 aaKnown RBP12.31□□□□□ -0.44
CBX3-203ENST00000409747 RNF7Q9UBF6 113 aa12.31□□□□□ -0.44
CBX3-203ENST00000409747 TRAV40A0A0B4J280 105 aa12.31□□□□□ -0.44
CBX3-203ENST00000409747 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.31□□□□□ -0.44
CBX3-203ENST00000409747 KIR2DS1A0A191URI9 304 aa12.31□□□□□ -0.44
CBX3-203ENST00000409747 ZNF878C9JN71 531 aa12.31□□□□□ -0.44
CBX3-203ENST00000409747 ENSAO43768 121 aaKnown RBP12.31□□□□□ -0.44
CBX3-203ENST00000409747 PLATP00750 562 aa12.31□□□□□ -0.44
CBX3-203ENST00000409747 GASTP01350 101 aa12.31□□□□□ -0.44
CBX3-203ENST00000409747 IFNGP01579 166 aa12.31□□□□□ -0.44
CBX3-203ENST00000409747 RNASE1P07998 156 aaKnown RBP12.31□□□□□ -0.44
CBX3-203ENST00000409747 SPARCP09486 303 aa12.31□□□□□ -0.44
CBX3-203ENST00000409747 ATP6V1B2P21281 511 aa12.31□□□□□ -0.44
CBX3-203ENST00000409747 SLC25A1P53007 311 aa12.31□□□□□ -0.44
CBX3-203ENST00000409747 ZNF92Q03936 586 aa12.31□□□□□ -0.44
CBX3-203ENST00000409747 SNAI3Q3KNW1 292 aa12.31□□□□□ -0.44
CBX3-203ENST00000409747 FAM201AQ5SY85 155 aa12.31□□□□□ -0.44
CBX3-203ENST00000409747 PRAMEF6Q5VXH4 476 aa12.31□□□□□ -0.44
CBX3-203ENST00000409747 BCL6BQ8N143 479 aaPredicted RBP12.31□□□□□ -0.44
CBX3-203ENST00000409747 OR8D4Q8NGM9 314 aa12.31□□□□□ -0.44
CBX3-203ENST00000409747 OR9Q1Q8NGQ5 310 aa12.31□□□□□ -0.44
CBX3-203ENST00000409747 KCNJ15Q99712 375 aa12.31□□□□□ -0.44
CBX3-203ENST00000409747 TSSK6Q9BXA6 273 aa12.31□□□□□ -0.44
CBX3-203ENST00000409747 REEP1Q9H902 201 aa12.31□□□□□ -0.44
CBX3-203ENST00000409747 UFSP2Q9NUQ7 469 aa12.31□□□□□ -0.44
CBX3-203ENST00000409747 KIF17Q9P2E2 1029 aa12.31□□□□□ -0.44
CBX3-203ENST00000409747 XRCC2O43543 280 aa12.3□□□□□ -0.44
CBX3-203ENST00000409747 PTBP3O95758 552 aaKnown RBP12.3□□□□□ -0.44
CBX3-203ENST00000409747 IGHV4-38-2P0DP08 117 aa12.3□□□□□ -0.44
CBX3-203ENST00000409747 PSMB10P40306 273 aa12.3□□□□□ -0.44
CBX3-203ENST00000409747 RPS27P42677 84 aaKnown RBP12.3□□□□□ -0.44
CBX3-203ENST00000409747 SLC15A1P46059 708 aa12.3□□□□□ -0.44
CBX3-203ENST00000409747 BPIFB3P59826 476 aa12.3□□□□□ -0.44
CBX3-203ENST00000409747 PCK2Q16822 640 aa12.3□□□□□ -0.44
CBX3-203ENST00000409747 FAM98BQ52LJ0 330 aaKnown RBP12.3□□□□□ -0.44
CBX3-203ENST00000409747 TEX30Q5JUR7 227 aa12.3□□□□□ -0.44
CBX3-203ENST00000409747 GLYATL3Q5SZD4 288 aa12.3□□□□□ -0.44
CBX3-203ENST00000409747 ZNF362Q5T0B9 420 aaPredicted RBP12.3□□□□□ -0.44
CBX3-203ENST00000409747 CD276Q5ZPR3 534 aa12.3□□□□□ -0.44
CBX3-203ENST00000409747 WDR25Q64LD2 544 aaPredicted RBP12.3□□□□□ -0.44
CBX3-203ENST00000409747 SHISA2Q6UWI4 295 aa12.3□□□□□ -0.44
CBX3-203ENST00000409747 FITM2Q8N6M3 262 aa12.3□□□□□ -0.44
CBX3-203ENST00000409747 OR51L1Q8NGJ5 315 aa12.3□□□□□ -0.44
CBX3-203ENST00000409747 OR2AE1Q8NHA4 323 aa12.3□□□□□ -0.44
CBX3-203ENST00000409747 SLAMF6Q96DU3 332 aa12.3□□□□□ -0.44
CBX3-203ENST00000409747 ZNF48Q96MX3 618 aaPredicted RBP12.3□□□□□ -0.44
CBX3-203ENST00000409747 ZNF747Q9BV97 191 aa12.3□□□□□ -0.44
CBX3-203ENST00000409747 MMADHCQ9H3L0 296 aaPredicted RBP12.3□□□□□ -0.44
CBX3-203ENST00000409747 SP140LQ9H930 580 aa12.3□□□□□ -0.44
CBX3-203ENST00000409747 SAMHD1Q9Y3Z3 626 aaKnown RBP12.3□□□□□ -0.44
CBX3-203ENST00000409747 RIIAD1A6NNX1 92 aa12.29□□□□□ -0.44
CBX3-203ENST00000409747 NDUFA2O43678 99 aa12.29□□□□□ -0.44
CBX3-203ENST00000409747 ZNF3P17036 446 aa12.29□□□□□ -0.44
CBX3-203ENST00000409747 SPI1P17947 270 aa12.29□□□□□ -0.44
CBX3-203ENST00000409747 DDOSTP39656 456 aa12.29□□□□□ -0.44
CBX3-203ENST00000409747 GRB2P62993 217 aaKnown RBP12.29□□□□□ -0.44
CBX3-203ENST00000409747 CRMP1Q14194 572 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms