RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 LRRC56Q8IYG6 542 aaPredicted RBP7.62□□□□□ -1.19
SCN9A-203ENST00000409672 OR2AE1Q8NHA4 323 aa7.62□□□□□ -1.19
SCN9A-203ENST00000409672 LYSMD1Q96S90 227 aa7.62□□□□□ -1.19
SCN9A-203ENST00000409672 CLEC2DQ9UHP7 191 aa7.62□□□□□ -1.19
SCN9A-203ENST00000409672 UBE2L5PA0A1B0GUS4 154 aa7.62□□□□□ -1.19
SCN9A-203ENST00000409672 A0A1W2PPC4 97 aa7.62□□□□□ -1.19
SCN9A-203ENST00000409672 APEX1P27695 318 aaKnown RBP7.62□□□□□ -1.19
SCN9A-203ENST00000409672 TMEM267Q0VDI3 215 aaPredicted RBP7.62□□□□□ -1.19
SCN9A-203ENST00000409672 MICBQ29980 383 aa7.62□□□□□ -1.19
SCN9A-203ENST00000409672 CEACAM16Q2WEN9 425 aa7.62□□□□□ -1.19
SCN9A-203ENST00000409672 OR2T2Q6IF00 324 aa7.62□□□□□ -1.19
SCN9A-203ENST00000409672 LHFPL2Q6ZUX7 228 aa7.62□□□□□ -1.19
SCN9A-203ENST00000409672 ZNF683Q8IZ20 524 aa7.62□□□□□ -1.19
SCN9A-203ENST00000409672 RANGRFQ9HD47 186 aaPredicted RBP7.62□□□□□ -1.19
SCN9A-203ENST00000409672 WNT1P04628 370 aa7.62□□□□□ -1.19
SCN9A-203ENST00000409672 METAP1P53582 386 aa7.62□□□□□ -1.19
SCN9A-203ENST00000409672 LRRTM1Q86UE6 522 aa7.62□□□□□ -1.19
SCN9A-203ENST00000409672 RPUSD4Q96CM3 377 aaKnown RBP7.62□□□□□ -1.19
SCN9A-203ENST00000409672 A0A1B0GUL6 1792 aa7.62□□□□□ -1.19
SCN9A-203ENST00000409672 DNAJB5O75953 348 aa7.62□□□□□ -1.19
SCN9A-203ENST00000409672 OR2T7P0C7T2 308 aa7.62□□□□□ -1.19
SCN9A-203ENST00000409672 CD1BP29016 333 aa7.62□□□□□ -1.19
SCN9A-203ENST00000409672 C4orf17Q53FE4 359 aa7.62□□□□□ -1.19
SCN9A-203ENST00000409672 CLVS2Q5SYC1 327 aa7.62□□□□□ -1.19
SCN9A-203ENST00000409672 GPR45Q9Y5Y3 372 aa7.62□□□□□ -1.19
SCN9A-203ENST00000409672 TDRD15B5MCY1 1934 aaKnown RBP7.62□□□□□ -1.19
SCN9A-203ENST00000409672 A0A1W2PR48 441 aa7.62□□□□□ -1.19
SCN9A-203ENST00000409672 F2RL2O00254 374 aa7.62□□□□□ -1.19
SCN9A-203ENST00000409672 ZNF133P52736 654 aaPredicted RBP7.62□□□□□ -1.19
SCN9A-203ENST00000409672 RHOUQ7L0Q8 258 aa7.62□□□□□ -1.19
SCN9A-203ENST00000409672 C16orf52Q8NHV5 167 aa7.62□□□□□ -1.19
SCN9A-203ENST00000409672 ITPKCQ96DU7 683 aa7.62□□□□□ -1.19
SCN9A-203ENST00000409672 NIPSNAP1Q9BPW8 284 aa7.62□□□□□ -1.19
SCN9A-203ENST00000409672 A4GNTQ9UNA3 340 aa7.62□□□□□ -1.19
SCN9A-203ENST00000409672 LOC100289279A0A1B0GTE1 492 aa7.62□□□□□ -1.19
SCN9A-203ENST00000409672 ZNF487B1APH4 448 aa7.62□□□□□ -1.19
SCN9A-203ENST00000409672 TSPAN31Q12999 210 aa7.62□□□□□ -1.19
SCN9A-203ENST00000409672 HSD17B13Q7Z5P4 300 aaPredicted RBP7.62□□□□□ -1.19
SCN9A-203ENST00000409672 NRIP3Q9NQ35 241 aa7.62□□□□□ -1.19
SCN9A-203ENST00000409672 A0A0D9SG52 128 aa7.62□□□□□ -1.19
SCN9A-203ENST00000409672 C20orf202A1L168 122 aa7.62□□□□□ -1.19
SCN9A-203ENST00000409672 NPPBP16860 134 aa7.62□□□□□ -1.19
SCN9A-203ENST00000409672 UBE2MP61081 183 aaKnown RBP7.62□□□□□ -1.19
SCN9A-203ENST00000409672 ZNF691Q5VV52 312 aa7.62□□□□□ -1.19
SCN9A-203ENST00000409672 ABHD17CQ6PCB6 329 aa7.62□□□□□ -1.19
SCN9A-203ENST00000409672 SLC7A13Q8TCU3 470 aa7.62□□□□□ -1.19
SCN9A-203ENST00000409672 SDR39U1Q9NRG7 319 aaPredicted RBP7.62□□□□□ -1.19
SCN9A-203ENST00000409672 ZNF716A6NP11 495 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 GABRG2P18507 467 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 ZNF141Q15928 474 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 SLCO4C1Q6ZQN7 724 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 OR4C3Q8NH37 302 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 PRDM14Q9GZV8 571 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 FAM212BQ9NTI7 297 aaPredicted RBP7.61□□□□□ -1.19
SCN9A-203ENST00000409672 NDRG4Q9ULP0 352 aaKnown RBP7.61□□□□□ -1.19
SCN9A-203ENST00000409672 IGKV3OR2-268A0A0C4DH90 116 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 CGB1A6NKQ9 187 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 ZBTB42B2RXF5 422 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 FAM189A1O60320 539 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 ORM2P19652 201 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 GDNFP39905 211 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 PNLIPRP2P54317 469 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 TCTAP57738 103 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 GSG1Q2KHT4 349 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 RPL22L1Q6P5R6 122 aaKnown RBP7.61□□□□□ -1.19
SCN9A-203ENST00000409672 FLVCR1Q9Y5Y0 555 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 ZNF724A8MTY0 619 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 TMEM189-UBE2V1I3L0A0 370 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 UPK1BO75841 260 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 SLC25A4P12235 298 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 NAGAP17050 411 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 TEAD1P28347 426 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 ECSCRQ19T08 205 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 PAQR9Q6ZVX9 377 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 NOXA1Q86UR1 476 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 OR1B1Q8NGR6 318 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 ORAI1Q96D31 301 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 IP6K3Q96PC2 410 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 OR51I2Q9H344 312 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 SIAEQ9HAT2 523 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 RABAC1Q9UI14 185 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 LOC102723971A0A1B0GUV8 181 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 M0R1X1 148 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 PPM1DO15297 605 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 PGFP49763 221 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 DAPP51397 102 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 BTN1A1Q13410 526 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 TMEM108Q6UXF1 575 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 OLIG1Q8TAK6 271 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 RPL3LQ92901 407 aaKnown RBP7.61□□□□□ -1.19
SCN9A-203ENST00000409672 MS4A18H0YCH9 400 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 CD14P08571 375 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 RD3LP0DJH9 198 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 T-ENOLP0DO92 83 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 MS4A18Q3C1V0 323 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 THEM4Q5T1C6 240 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 RTL10Q7L3V2 364 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 SLC36A1Q7Z2H8 476 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 OR4Q3Q8NH05 313 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 BCL7CQ8WUZ0 217 aaPredicted RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms