RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 DOK3Q7L591 496 aa12.25□□□□□ -0.45
GPNMB-203ENST00000409458 SAMD12Q8N8I0 201 aa12.25□□□□□ -0.45
GPNMB-203ENST00000409458 NAXEQ8NCW5 288 aa12.25□□□□□ -0.45
GPNMB-203ENST00000409458 OR14K1Q8NGZ2 314 aa12.25□□□□□ -0.45
GPNMB-203ENST00000409458 SNRNP40Q96DI7 357 aaKnown RBP12.25□□□□□ -0.45
GPNMB-203ENST00000409458 OR10A2Q9H208 303 aa12.25□□□□□ -0.45
GPNMB-203ENST00000409458 B3GNT2Q9NY97 397 aa12.25□□□□□ -0.45
GPNMB-203ENST00000409458 ATPIF1Q9UII2 106 aa12.25□□□□□ -0.45
GPNMB-203ENST00000409458 FAM25AB3EWG3 89 aa12.24□□□□□ -0.45
GPNMB-203ENST00000409458 FAM25CB3EWG5 89 aa12.24□□□□□ -0.45
GPNMB-203ENST00000409458 FAM25GB3EWG6 89 aa12.24□□□□□ -0.45
GPNMB-203ENST00000409458 RAD51DO75771 328 aa12.24□□□□□ -0.45
GPNMB-203ENST00000409458 LYZL6O75951 148 aa12.24□□□□□ -0.45
GPNMB-203ENST00000409458 UBL3O95164 117 aa12.24□□□□□ -0.45
GPNMB-203ENST00000409458 AZGP1P25311 298 aaKnown RBP12.24□□□□□ -0.45
GPNMB-203ENST00000409458 GNALP38405 381 aa12.24□□□□□ -0.45
GPNMB-203ENST00000409458 FAM131AQ6UXB0 335 aa12.24□□□□□ -0.45
GPNMB-203ENST00000409458 PLPP7Q8NBV4 271 aa12.24□□□□□ -0.45
GPNMB-203ENST00000409458 ZNF671Q8TAW3 534 aa12.24□□□□□ -0.45
GPNMB-203ENST00000409458 NKX3-1Q99801 234 aaPredicted RBP12.24□□□□□ -0.45
GPNMB-203ENST00000409458 SRRQ9GZT4 340 aa12.24□□□□□ -0.45
GPNMB-203ENST00000409458 LIN7BQ9HAP6 207 aa12.24□□□□□ -0.45
GPNMB-203ENST00000409458 ADAM30Q9UKF2 790 aa12.24□□□□□ -0.45
GPNMB-203ENST00000409458 LOC100509620A0A075B734 347 aa12.23□□□□□ -0.45
GPNMB-203ENST00000409458 MED19A0JLT2 244 aaPredicted RBP12.23□□□□□ -0.45
GPNMB-203ENST00000409458 FABP12A6NFH5 140 aa12.23□□□□□ -0.45
GPNMB-203ENST00000409458 CNOT4O95628 575 aaKnown RBP12.23□□□□□ -0.45
GPNMB-203ENST00000409458 CGAP01215 116 aa12.23□□□□□ -0.45
GPNMB-203ENST00000409458 LCATP04180 440 aa12.23□□□□□ -0.45
GPNMB-203ENST00000409458 TMIGD3P0DMS9 266 aaPredicted RBP12.23□□□□□ -0.45
GPNMB-203ENST00000409458 ZNF20P17024 532 aa12.23□□□□□ -0.45
GPNMB-203ENST00000409458 ARR3P36575 388 aa12.23□□□□□ -0.45
GPNMB-203ENST00000409458 DDOSTP39656 456 aa12.23□□□□□ -0.45
GPNMB-203ENST00000409458 EVX1P49640 407 aa12.23□□□□□ -0.45
GPNMB-203ENST00000409458 RAB1AP62820 205 aa12.23□□□□□ -0.45
GPNMB-203ENST00000409458 SPOCK1Q08629 439 aa12.23□□□□□ -0.45
GPNMB-203ENST00000409458 TMEM53Q6P2H8 277 aa12.23□□□□□ -0.45
GPNMB-203ENST00000409458 LRRC28Q86X40 367 aaPredicted RBP12.23□□□□□ -0.45
GPNMB-203ENST00000409458 ZNF584Q8IVC4 421 aa12.23□□□□□ -0.45
GPNMB-203ENST00000409458 SERPINA12Q8IW75 414 aa12.23□□□□□ -0.45
GPNMB-203ENST00000409458 OR52H1Q8NGJ2 320 aa12.23□□□□□ -0.45
GPNMB-203ENST00000409458 OR2AE1Q8NHA4 323 aa12.23□□□□□ -0.45
GPNMB-203ENST00000409458 STARD4Q96DR4 205 aa12.23□□□□□ -0.45
GPNMB-203ENST00000409458 OPN3Q9H1Y3 402 aaPredicted RBP12.23□□□□□ -0.45
GPNMB-203ENST00000409458 OCEL1Q9H607 264 aa12.23□□□□□ -0.45
GPNMB-203ENST00000409458 PLSCR4Q9NRQ2 329 aa12.23□□□□□ -0.45
GPNMB-203ENST00000409458 SPATA2Q9UM82 520 aa12.23□□□□□ -0.45
GPNMB-203ENST00000409458 PROCRQ9UNN8 238 aa12.23□□□□□ -0.45
GPNMB-203ENST00000409458 V9GYS6 101 aa12.23□□□□□ -0.45
GPNMB-203ENST00000409458 NCOR2Q9Y618 2525 aa12.23□□□□□ -0.45
GPNMB-203ENST00000409458 UPK1BO75841 260 aa12.22□□□□□ -0.45
GPNMB-203ENST00000409458 DHRS3O75911 302 aa12.22□□□□□ -0.45
GPNMB-203ENST00000409458 COX5BP10606 129 aa12.22□□□□□ -0.45
GPNMB-203ENST00000409458 CCL2P13500 99 aa12.22□□□□□ -0.45
GPNMB-203ENST00000409458 EDN3P14138 238 aa12.22□□□□□ -0.45
GPNMB-203ENST00000409458 COX5AP20674 150 aa12.22□□□□□ -0.45
GPNMB-203ENST00000409458 CFPP27918 469 aa12.22□□□□□ -0.45
GPNMB-203ENST00000409458 PSMD7P51665 324 aa12.22□□□□□ -0.45
GPNMB-203ENST00000409458 TSC22D1Q15714 1073 aa12.22□□□□□ -0.45
GPNMB-203ENST00000409458 GSG1Q2KHT4 349 aa12.22□□□□□ -0.45
GPNMB-203ENST00000409458 GLYATL3Q5SZD4 288 aa12.22□□□□□ -0.45
GPNMB-203ENST00000409458 GFRALQ6UXV0 394 aa12.22□□□□□ -0.45
GPNMB-203ENST00000409458 Q6ZSR3 168 aa12.22□□□□□ -0.45
GPNMB-203ENST00000409458 NANOS1Q8WY41 292 aaKnown RBP12.22□□□□□ -0.45
GPNMB-203ENST00000409458 SGK3Q96BR1 496 aa12.22□□□□□ -0.45
GPNMB-203ENST00000409458 SOSTQ9BQB4 213 aa12.22□□□□□ -0.45
GPNMB-203ENST00000409458 ABCB10Q9NRK6 738 aa12.22□□□□□ -0.45
GPNMB-203ENST00000409458 ASF1BQ9NVP2 202 aa12.22□□□□□ -0.45
GPNMB-203ENST00000409458 EXTL2Q9UBQ6 330 aa12.22□□□□□ -0.45
GPNMB-203ENST00000409458 OR5V1Q9UGF6 321 aa12.22□□□□□ -0.45
GPNMB-203ENST00000409458 STEAP1Q9UHE8 339 aa12.22□□□□□ -0.45
GPNMB-203ENST00000409458 TMEM127O75204 238 aa12.22□□□□□ -0.45
GPNMB-203ENST00000409458 ZNF12P17014 697 aa12.22□□□□□ -0.45
GPNMB-203ENST00000409458 STOMP27105 288 aa12.22□□□□□ -0.45
GPNMB-203ENST00000409458 TIMP3P35625 211 aa12.22□□□□□ -0.45
GPNMB-203ENST00000409458 TGFBR3Q03167 851 aa12.22□□□□□ -0.45
GPNMB-203ENST00000409458 P2RY14Q15391 338 aa12.22□□□□□ -0.45
GPNMB-203ENST00000409458 GABRA6Q16445 453 aa12.22□□□□□ -0.45
GPNMB-203ENST00000409458 ZNF529Q6P280 563 aa12.22□□□□□ -0.45
GPNMB-203ENST00000409458 DPPA2Q7Z7J5 298 aa12.22□□□□□ -0.45
GPNMB-203ENST00000409458 MDP1Q86V88 176 aa12.22□□□□□ -0.45
GPNMB-203ENST00000409458 GABRG1Q8N1C3 465 aa12.22□□□□□ -0.45
GPNMB-203ENST00000409458 DTX3Q8N9I9 347 aa12.22□□□□□ -0.45
GPNMB-203ENST00000409458 ZNF610Q8N9Z0 462 aa12.22□□□□□ -0.45
GPNMB-203ENST00000409458 OR1M1Q8NGA1 313 aa12.22□□□□□ -0.45
GPNMB-203ENST00000409458 OR4M1Q8NGD0 313 aa12.22□□□□□ -0.45
GPNMB-203ENST00000409458 OR13C9Q8NGT0 318 aa12.22□□□□□ -0.45
GPNMB-203ENST00000409458 REEP6Q96HR9 211 aa12.22□□□□□ -0.45
GPNMB-203ENST00000409458 C1QTNF5Q9BXJ0 243 aa12.22□□□□□ -0.45
GPNMB-203ENST00000409458 PLEKHA1Q9HB21 404 aa12.22□□□□□ -0.45
GPNMB-203ENST00000409458 CYSLTR2Q9NS75 346 aa12.22□□□□□ -0.45
GPNMB-203ENST00000409458 CGGBP1Q9UFW8 167 aaPredicted RBP12.22□□□□□ -0.45
GPNMB-203ENST00000409458 CACNA1AO00555 2505 aa12.21□□□□□ -0.45
GPNMB-203ENST00000409458 A0A1W2PR80 420 aa12.21□□□□□ -0.45
GPNMB-203ENST00000409458 C5orf49A4QMS7 147 aa12.21□□□□□ -0.45
GPNMB-203ENST00000409458 SLC17A2O00624 439 aa12.21□□□□□ -0.45
GPNMB-203ENST00000409458 IL2RAP01589 272 aa12.21□□□□□ -0.45
GPNMB-203ENST00000409458 CRHP06850 196 aa12.21□□□□□ -0.45
GPNMB-203ENST00000409458 CALCBP10092 127 aa12.21□□□□□ -0.45
GPNMB-203ENST00000409458 CCNOP22674 350 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms