RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 ZP1P60852 638 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 LCN6P62502 163 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 TLE3Q04726 772 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 PMPCAQ10713 525 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 MRPL2Q5T653 305 aaKnown RBP5.3□□□□□ -1.56
HDAC9-203ENST00000406072 TMEM244Q5VVB8 128 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 TXNDC8Q6A555 127 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 PRR27Q6MZM9 219 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 LANCL3Q6ZV70 420 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 EIF4E3Q8N5X7 224 aaKnown RBP5.3□□□□□ -1.56
HDAC9-203ENST00000406072 OR8U1Q8NH10 309 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 THAP3Q8WTV1 239 aaPredicted RBP5.3□□□□□ -1.56
HDAC9-203ENST00000406072 MYEOVQ96EZ4 313 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 MISP3Q96FF7 219 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 IP6K3Q96PC2 410 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 OR51I2Q9H344 312 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 ZNF442Q9H7R0 627 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 CERS4Q9HA82 394 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 PHPT1Q9NRX4 125 aaPredicted RBP5.3□□□□□ -1.56
HDAC9-203ENST00000406072 CHRNA9Q9UGM1 479 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 SH3BGRL2Q9UJC5 107 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 HSF4Q9ULV5 492 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 HEBP2Q9Y5Z4 205 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 MDFIC2A0A1B0GVS7 189 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 CDRT15L2A8MXV6 281 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 B4E171 279 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 FTCDNL1E5RQL4 147 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 J3QR89 54 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 TLX3O43711 291 aaPredicted RBP5.3□□□□□ -1.56
HDAC9-203ENST00000406072 CRHP06850 196 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 MPGP29372 298 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 IL12BP29460 328 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 SFTPDP35247 375 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 WNT3P56703 355 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 PFN3P60673 137 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 DLK1P80370 383 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 HABP2Q14520 560 aaPredicted RBP5.3□□□□□ -1.56
HDAC9-203ENST00000406072 FAM199XQ6PEV8 388 aaPredicted RBP5.3□□□□□ -1.56
HDAC9-203ENST00000406072 VITQ6UXI7 678 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 SLCO4C1Q6ZQN7 724 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 LRRTM4Q86VH4 590 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 SYS1Q8N2H4 156 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 PFN4Q8NHR9 129 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 CIB3Q96Q77 187 aaPredicted RBP5.3□□□□□ -1.56
HDAC9-203ENST00000406072 TBX15Q96SF7 602 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 NKX3-1Q99801 234 aaPredicted RBP5.3□□□□□ -1.56
HDAC9-203ENST00000406072 SLC17A9Q9BYT1 436 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 HIPK2Q9H2X6 1198 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 ZDHHC11Q9H8X9 412 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 SPHK2Q9NRA0 654 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 TMEM100Q9NV29 134 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 SLCO1C1Q9NYB5 712 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 CLEC1BQ9P126 229 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 B3GALT5Q9Y2C3 310 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 A0A0A6YYC8 382 aaPredicted RBP5.3□□□□□ -1.56
HDAC9-203ENST00000406072 SLC5A10A0PJK1 596 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 LRP5LA4QPB2 252 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 E5RGE8 158 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 H3BQ15 152 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 I3L1I5 382 aaPredicted RBP5.3□□□□□ -1.56
HDAC9-203ENST00000406072 NRG2O14511 850 aaPredicted RBP5.3□□□□□ -1.56
HDAC9-203ENST00000406072 CTDSPLO15194 276 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 SLC16A7O60669 478 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 SERPINE2P07093 398 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 CCKARP32238 428 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 TNFRSF4P43489 277 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 PSMB3P49720 205 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 HLA-DRB3P79483 266 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 HSF1Q00613 529 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 PAX5Q02548 391 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 ACOT6Q3I5F7 207 aaPredicted RBP5.3□□□□□ -1.56
HDAC9-203ENST00000406072 TMEM128Q5BJH2 165 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 OGFOD3Q6PK18 319 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 ASPGQ86U10 573 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 LGI3Q8N145 548 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 IRF7Q92985 503 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 MR1Q95460 341 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 MRGPRX3Q96LB0 322 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 TMEM59Q9BXS4 323 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 WWTR1Q9GZV5 400 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 CHST11Q9NPF2 352 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 RAB22AQ9UL26 194 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 NSG2Q9Y328 171 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 COLEC10Q9Y6Z7 277 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 CKAP5Q14008 2032 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 CCDC88CQ9P219 2028 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 C9orf170A2RU37 121 aa5.29□□□□□ -1.56
HDAC9-203ENST00000406072 C1QTNF3-AMACRE9PGA6 284 aa5.29□□□□□ -1.56
HDAC9-203ENST00000406072 FOXE1O00358 373 aaPredicted RBP5.29□□□□□ -1.56
HDAC9-203ENST00000406072 UBE2CO00762 179 aa5.29□□□□□ -1.56
HDAC9-203ENST00000406072 FCMRO60667 390 aa5.29□□□□□ -1.56
HDAC9-203ENST00000406072 ADAP1O75689 374 aa5.29□□□□□ -1.56
HDAC9-203ENST00000406072 CEBPBP17676 345 aa5.29□□□□□ -1.56
HDAC9-203ENST00000406072 OR10J1P30954 320 aa5.29□□□□□ -1.56
HDAC9-203ENST00000406072 WASP42768 502 aa5.29□□□□□ -1.56
HDAC9-203ENST00000406072 ZNF345Q14585 488 aa5.29□□□□□ -1.56
HDAC9-203ENST00000406072 MEP1BQ16820 701 aa5.29□□□□□ -1.56
HDAC9-203ENST00000406072 C22orf39Q6P5X5 142 aa5.29□□□□□ -1.56
HDAC9-203ENST00000406072 CFAP161Q6P656 301 aa5.29□□□□□ -1.56
HDAC9-203ENST00000406072 ANKRD16Q6P6B7 361 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms