RNA–Protein interactions for RNA: ENST00000400053.8

PTPRM-202, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRM, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-202ENST00000400053 CDC20BQ86Y33 519 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 C19orf47Q8N9M1 422 aaKnown RBP8.07□□□□□ -1.12
PTPRM-202ENST00000400053 TMEM104Q8NE00 496 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 SLC35A4Q96G79 324 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 ZDHHC5Q9C0B5 715 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 MTCH1Q9NZJ7 389 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 THAP10Q9P2Z0 257 aaPredicted RBP8.07□□□□□ -1.12
PTPRM-202ENST00000400053 FAM186AA6NE01 2351 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 CXorf51AA0A1B0GTR3 108 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 SOD1P00441 154 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 SLC35E2P0CK97 266 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 FCGR2CP31995 323 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 PXNP49023 591 aaPredicted RBP8.06□□□□□ -1.12
PTPRM-202ENST00000400053 RNF212Q495C1 297 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 MARCH3Q86UD3 253 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 TSLPQ969D9 159 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 FBXW5Q969U6 566 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 AKR1E2Q96JD6 320 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 SDF2Q99470 211 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 NRSN2Q9GZP1 204 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 TRAPPC4Q9Y296 219 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 COA3Q9Y2R0 106 aaPredicted RBP8.06□□□□□ -1.12
PTPRM-202ENST00000400053 TRIP11Q15643 1979 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 SNRPGP15A8MWD9 76 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 MGMTP16455 207 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 ELLP55199 621 aaPredicted RBP8.06□□□□□ -1.12
PTPRM-202ENST00000400053 DPTQ07507 201 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 CDK5R1Q15078 307 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 METRNLQ641Q3 311 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 PET117Q6UWS5 81 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 MAML2Q8IZL2 1156 aaPredicted RBP8.06□□□□□ -1.12
PTPRM-202ENST00000400053 OR10P1Q8NGE3 313 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 OR8D4Q8NGM9 314 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 ASB13Q8WXK3 278 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 CCDC74BQ96LY2 380 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 CMTM3Q96MX0 182 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 NDRG3Q9UGV2 375 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 ST8SIA5O15466 376 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 COX5AP20674 150 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 AMTP48728 403 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 ZNF718Q3SXZ3 478 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 OR8G2PQ6IF36 304 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 BATF2Q8N1L9 274 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 OR4C16Q8NGL9 310 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 SMIM4Q8WVI0 70 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 NXPE3Q969Y0 559 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 SMIM19Q96E16 107 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 HHIPQ96QV1 700 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 MED18Q9BUE0 208 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 COMMD5Q9GZQ3 224 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 COL4A5P29400 1685 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 OR2M5A3KFT3 312 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 HSPB2A8KAH6 182 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 PYCARD-AS1I3L0S3 204 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 TMEM127O75204 238 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 UTS2O95399 124 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 CD37P11049 281 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 EPXP11678 715 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 NDUFB7P17568 137 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 CSF2RBP32927 897 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 DIO1P49895 249 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 LIM2P55344 173 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 INSL4Q14641 139 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 HSPB2Q16082 182 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 ZNF561Q8N587 486 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 NECAP1Q8NC96 275 aa8.06□□□□□ -1.12
PTPRM-202ENST00000400053 PLEKHB1Q9UF11 243 aaPredicted RBP8.06□□□□□ -1.12
PTPRM-202ENST00000400053 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.06□□□□□ -1.12
PTPRM-202ENST00000400053 LOC107986453A0A1B0GWG9 222 aa8.05□□□□□ -1.12
PTPRM-202ENST00000400053 COL11A2P13942 1736 aaPredicted RBP8.05□□□□□ -1.12
PTPRM-202ENST00000400053 RAB5AP20339 215 aa8.05□□□□□ -1.12
PTPRM-202ENST00000400053 SUMO1P63165 101 aaKnown RBP8.05□□□□□ -1.12
PTPRM-202ENST00000400053 LCN15Q6UWW0 184 aa8.05□□□□□ -1.12
PTPRM-202ENST00000400053 LSRQ86X29 649 aaPredicted RBP8.05□□□□□ -1.12
PTPRM-202ENST00000400053 HMGCLL1Q8TB92 370 aa8.05□□□□□ -1.12
PTPRM-202ENST00000400053 EDAQ92838 391 aa8.05□□□□□ -1.12
PTPRM-202ENST00000400053 DCBLD2Q96PD2 775 aa8.05□□□□□ -1.12
PTPRM-202ENST00000400053 CALHM2Q9HA72 323 aa8.05□□□□□ -1.12
PTPRM-202ENST00000400053 C12orf10Q9HB07 376 aa8.05□□□□□ -1.12
PTPRM-202ENST00000400053 FGF20Q9NP95 211 aaPredicted RBP8.05□□□□□ -1.12
PTPRM-202ENST00000400053 CYSLTR2Q9NS75 346 aa8.05□□□□□ -1.12
PTPRM-202ENST00000400053 ING1Q9UK53 422 aaPredicted RBP8.05□□□□□ -1.12
PTPRM-202ENST00000400053 SLCO1B1Q9Y6L6 691 aa8.05□□□□□ -1.12
PTPRM-202ENST00000400053 ZNF727A8MUV8 499 aa8.05□□□□□ -1.12
PTPRM-202ENST00000400053 G3V3Q6 166 aa8.05□□□□□ -1.12
PTPRM-202ENST00000400053 IRS1P35568 1242 aa8.05□□□□□ -1.12
PTPRM-202ENST00000400053 RBP2P50120 134 aa8.05□□□□□ -1.12
PTPRM-202ENST00000400053 MLF1P58340 268 aa8.05□□□□□ -1.12
PTPRM-202ENST00000400053 H1FNTQ75WM6 255 aaPredicted RBP8.05□□□□□ -1.12
PTPRM-202ENST00000400053 OR2L13Q8N349 312 aa8.05□□□□□ -1.12
PTPRM-202ENST00000400053 OR2M7Q8NG81 312 aa8.05□□□□□ -1.12
PTPRM-202ENST00000400053 GOT1L1Q8NHS2 421 aaPredicted RBP8.05□□□□□ -1.12
PTPRM-202ENST00000400053 EDARADDQ8WWZ3 215 aa8.05□□□□□ -1.12
PTPRM-202ENST00000400053 ST6GAL2Q96JF0 529 aa8.05□□□□□ -1.12
PTPRM-202ENST00000400053 PLA2G12AQ9BZM1 189 aa8.05□□□□□ -1.12
PTPRM-202ENST00000400053 OR51I2Q9H344 312 aa8.05□□□□□ -1.12
PTPRM-202ENST00000400053 CHST11Q9NPF2 352 aa8.05□□□□□ -1.12
PTPRM-202ENST00000400053 LIN7CQ9NUP9 197 aaKnown RBP8.05□□□□□ -1.12
PTPRM-202ENST00000400053 FBXO34Q9NWN3 711 aa8.05□□□□□ -1.12
PTPRM-202ENST00000400053 SLC22A13Q9Y226 551 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms