RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 MAB21L2Q9Y586 359 aa12.49□□□□□ -0.41
SCAF4-202ENST00000399804 AQP7P3A6NL99 342 aa12.49□□□□□ -0.41
SCAF4-202ENST00000399804 SMLR1H3BR10 107 aa12.49□□□□□ -0.41
SCAF4-202ENST00000399804 LPLP06858 475 aa12.49□□□□□ -0.41
SCAF4-202ENST00000399804 UBBP0CG47 229 aa12.49□□□□□ -0.41
SCAF4-202ENST00000399804 GNRHRP30968 328 aa12.49□□□□□ -0.41
SCAF4-202ENST00000399804 GGTLC2Q14390 218 aa12.49□□□□□ -0.41
SCAF4-202ENST00000399804 SPERTQ8NA61 448 aa12.49□□□□□ -0.41
SCAF4-202ENST00000399804 TEX19Q8NA77 164 aa12.49□□□□□ -0.41
SCAF4-202ENST00000399804 NUDCD2Q8WVJ2 157 aa12.49□□□□□ -0.41
SCAF4-202ENST00000399804 ZNF700Q9H0M5 742 aa12.49□□□□□ -0.41
SCAF4-202ENST00000399804 HRASLSQ9HDD0 168 aa12.49□□□□□ -0.41
SCAF4-202ENST00000399804 OBP2BQ9NPH6 170 aa12.49□□□□□ -0.41
SCAF4-202ENST00000399804 KCNN3Q9UGI6 736 aa12.49□□□□□ -0.41
SCAF4-202ENST00000399804 FLVCR2Q9UPI3 526 aa12.49□□□□□ -0.41
SCAF4-202ENST00000399804 BDP1A6H8Y1 2624 aa12.49□□□□□ -0.41
SCAF4-202ENST00000399804 OR5H15A6NDH6 313 aa12.49□□□□□ -0.41
SCAF4-202ENST00000399804 F5H0A9 414 aaPredicted RBP12.49□□□□□ -0.41
SCAF4-202ENST00000399804 ANXA7P20073 488 aaKnown RBP12.49□□□□□ -0.41
SCAF4-202ENST00000399804 MMP15P51511 669 aa12.49□□□□□ -0.41
SCAF4-202ENST00000399804 BTG1P62324 171 aa12.49□□□□□ -0.41
SCAF4-202ENST00000399804 PLEKHN1Q494U1 663 aaPredicted RBP12.49□□□□□ -0.41
SCAF4-202ENST00000399804 GSG1LQ6UXU4 331 aa12.49□□□□□ -0.41
SCAF4-202ENST00000399804 ZNF611Q8N823 705 aa12.49□□□□□ -0.41
SCAF4-202ENST00000399804 AMELYQ99218 206 aa12.49□□□□□ -0.41
SCAF4-202ENST00000399804 MRPS18BQ9Y676 258 aaKnown RBP12.49□□□□□ -0.41
SCAF4-202ENST00000399804 GBF1Q92538 1859 aa12.48□□□□□ -0.41
SCAF4-202ENST00000399804 A0A0J9YW62 118 aa12.48□□□□□ -0.41
SCAF4-202ENST00000399804 OR6C65A6NJZ3 312 aa12.48□□□□□ -0.41
SCAF4-202ENST00000399804 SLC22A20A6NK97 555 aa12.48□□□□□ -0.41
SCAF4-202ENST00000399804 H3BUI4 141 aa12.48□□□□□ -0.41
SCAF4-202ENST00000399804 KLK10O43240 276 aa12.48□□□□□ -0.41
SCAF4-202ENST00000399804 COX6A1P12074 109 aa12.48□□□□□ -0.41
SCAF4-202ENST00000399804 RBP2P50120 134 aa12.48□□□□□ -0.41
SCAF4-202ENST00000399804 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.48□□□□□ -0.41
SCAF4-202ENST00000399804 PRR18Q8N4B5 295 aa12.48□□□□□ -0.41
SCAF4-202ENST00000399804 TRIB1Q96RU8 372 aa12.48□□□□□ -0.41
SCAF4-202ENST00000399804 RTN4RQ9BZR6 473 aa12.48□□□□□ -0.41
SCAF4-202ENST00000399804 FOXJ3Q9UPW0 622 aa12.48□□□□□ -0.41
SCAF4-202ENST00000399804 SF3B6Q9Y3B4 125 aaKnown RBP12.48□□□□□ -0.41
SCAF4-202ENST00000399804 COL4A4P53420 1690 aaPredicted RBP12.48□□□□□ -0.41
SCAF4-202ENST00000399804 HSPB6O14558 160 aa12.48□□□□□ -0.41
SCAF4-202ENST00000399804 XRCC3O43542 346 aa12.48□□□□□ -0.41
SCAF4-202ENST00000399804 ACSM4P0C7M7 580 aa12.48□□□□□ -0.41
SCAF4-202ENST00000399804 IDH3GP51553 393 aaPredicted RBP12.48□□□□□ -0.41
SCAF4-202ENST00000399804 GUCA2AQ02747 115 aa12.48□□□□□ -0.41
SCAF4-202ENST00000399804 REEP6Q96HR9 211 aa12.48□□□□□ -0.41
SCAF4-202ENST00000399804 ZNF385AQ96PM9 386 aaKnown RBP12.48□□□□□ -0.41
SCAF4-202ENST00000399804 PPA2Q9H2U2 334 aa12.48□□□□□ -0.41
SCAF4-202ENST00000399804 GLS2Q9UI32 602 aa12.48□□□□□ -0.41
SCAF4-202ENST00000399804 TRAV8-7A0A075B6U6 113 aa12.48□□□□□ -0.41
SCAF4-202ENST00000399804 RP2O75695 350 aa12.48□□□□□ -0.41
SCAF4-202ENST00000399804 ZNF32P17041 273 aa12.48□□□□□ -0.41
SCAF4-202ENST00000399804 CLDN20P56880 219 aa12.48□□□□□ -0.41
SCAF4-202ENST00000399804 MFGE8Q08431 387 aaPredicted RBP12.48□□□□□ -0.41
SCAF4-202ENST00000399804 DYRK1AQ13627 763 aa12.48□□□□□ -0.41
SCAF4-202ENST00000399804 TGIF1Q15583 401 aa12.48□□□□□ -0.41
SCAF4-202ENST00000399804 FNDC9Q8TBE3 224 aa12.48□□□□□ -0.41
SCAF4-202ENST00000399804 SUN5Q8TC36 379 aa12.48□□□□□ -0.41
SCAF4-202ENST00000399804 NINJ1Q92982 152 aa12.48□□□□□ -0.41
SCAF4-202ENST00000399804 KISS1RQ969F8 398 aaPredicted RBP12.48□□□□□ -0.41
SCAF4-202ENST00000399804 ACKR4Q9NPB9 350 aa12.48□□□□□ -0.41
SCAF4-202ENST00000399804 DENND4CQ5VZ89 1909 aa12.48□□□□□ -0.41
SCAF4-202ENST00000399804 BPNT1O95861 308 aa12.47□□□□□ -0.41
SCAF4-202ENST00000399804 PMP2P02689 132 aa12.47□□□□□ -0.41
SCAF4-202ENST00000399804 CD3DP04234 171 aa12.47□□□□□ -0.41
SCAF4-202ENST00000399804 SSTR2P30874 369 aa12.47□□□□□ -0.41
SCAF4-202ENST00000399804 CD96P40200 585 aa12.47□□□□□ -0.41
SCAF4-202ENST00000399804 HTR2BP41595 481 aa12.47□□□□□ -0.41
SCAF4-202ENST00000399804 VAMP2P63027 116 aa12.47□□□□□ -0.41
SCAF4-202ENST00000399804 COL19A1Q14993 1142 aa12.47□□□□□ -0.41
SCAF4-202ENST00000399804 ZNF79Q15937 498 aa12.47□□□□□ -0.41
SCAF4-202ENST00000399804 ZNF774Q6NX45 483 aa12.47□□□□□ -0.41
SCAF4-202ENST00000399804 OR1F12Q8NHA8 337 aa12.47□□□□□ -0.41
SCAF4-202ENST00000399804 SARAFQ96BY9 339 aa12.47□□□□□ -0.41
SCAF4-202ENST00000399804 MICU1Q9BPX6 476 aa12.47□□□□□ -0.41
SCAF4-202ENST00000399804 OR2S2Q9NQN1 319 aa12.47□□□□□ -0.41
SCAF4-202ENST00000399804 ZMIZ1Q9ULJ6 1067 aa12.47□□□□□ -0.41
SCAF4-202ENST00000399804 IGLV3-12A0A075B6K2 115 aa12.47□□□□□ -0.41
SCAF4-202ENST00000399804 AQP8O94778 261 aa12.47□□□□□ -0.41
SCAF4-202ENST00000399804 SDHBP21912 280 aa12.47□□□□□ -0.41
SCAF4-202ENST00000399804 MAGEA5P43359 124 aa12.47□□□□□ -0.41
SCAF4-202ENST00000399804 ARF1P84077 181 aaKnown RBP12.47□□□□□ -0.41
SCAF4-202ENST00000399804 KCNS2Q9ULS6 477 aa12.47□□□□□ -0.41
SCAF4-202ENST00000399804 UBE2J1Q9Y385 318 aaPredicted RBP12.47□□□□□ -0.41
SCAF4-202ENST00000399804 RPS4XP62701 263 aaKnown RBP12.47□□□□□ -0.41
SCAF4-202ENST00000399804 GRK1Q15835 563 aa12.47□□□□□ -0.41
SCAF4-202ENST00000399804 LINC01590Q5TEZ4 76 aa12.47□□□□□ -0.41
SCAF4-202ENST00000399804 FJX1Q86VR8 437 aa12.47□□□□□ -0.41
SCAF4-202ENST00000399804 OR5M9Q8NGP3 310 aa12.47□□□□□ -0.41
SCAF4-202ENST00000399804 OR6S1Q8NH40 331 aa12.47□□□□□ -0.41
SCAF4-202ENST00000399804 SYT3Q9BQG1 590 aa12.47□□□□□ -0.41
SCAF4-202ENST00000399804 ANGPTL4Q9BY76 406 aa12.47□□□□□ -0.41
SCAF4-202ENST00000399804 NXF2Q9GZY0 626 aaKnown RBP12.47□□□□□ -0.41
SCAF4-202ENST00000399804 ZNF275Q9NSD4 429 aaPredicted RBP12.47□□□□□ -0.41
SCAF4-202ENST00000399804 RDH8Q9NYR8 311 aa12.47□□□□□ -0.41
SCAF4-202ENST00000399804 COQ3Q9NZJ6 369 aa12.47□□□□□ -0.41
SCAF4-202ENST00000399804 LUZP4Q9P127 313 aa12.47□□□□□ -0.41
SCAF4-202ENST00000399804 WDR87Q6ZQQ6 2873 aa12.47□□□□□ -0.41
SCAF4-202ENST00000399804 TRAV17A0A0B4J275 112 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms