RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 RBM4BQ9BQ04 359 aaKnown RBP11.93□□□□□ -0.5
HLA-DQB1-202ENST00000399079 ABCA2Q9BZC7 2435 aa11.93□□□□□ -0.5
HLA-DQB1-202ENST00000399079 MALRD1Q5VYJ5 2156 aa11.92□□□□□ -0.5
HLA-DQB1-202ENST00000399079 LOC100289279A0A1B0GTE1 492 aa11.92□□□□□ -0.5
HLA-DQB1-202ENST00000399079 MLNRO43193 412 aa11.92□□□□□ -0.5
HLA-DQB1-202ENST00000399079 ALPLP05186 524 aa11.92□□□□□ -0.5
HLA-DQB1-202ENST00000399079 ANXA2P07355 339 aaKnown RBP11.92□□□□□ -0.5
HLA-DQB1-202ENST00000399079 H2BFMP0C1H6 154 aa11.92□□□□□ -0.5
HLA-DQB1-202ENST00000399079 TNFSF4P23510 183 aa11.92□□□□□ -0.5
HLA-DQB1-202ENST00000399079 GZMKP49863 264 aa11.92□□□□□ -0.5
HLA-DQB1-202ENST00000399079 LRRN1Q6UXK5 716 aa11.92□□□□□ -0.5
HLA-DQB1-202ENST00000399079 MRPL21Q7Z2W9 205 aaKnown RBP11.92□□□□□ -0.5
HLA-DQB1-202ENST00000399079 OR13G1Q8NGZ3 307 aa11.92□□□□□ -0.5
HLA-DQB1-202ENST00000399079 TMEM163Q8TC26 289 aa11.92□□□□□ -0.5
HLA-DQB1-202ENST00000399079 SLC30A2Q9BRI3 323 aa11.92□□□□□ -0.5
HLA-DQB1-202ENST00000399079 REPIN1Q9BWE0 567 aaKnown RBP11.92□□□□□ -0.5
HLA-DQB1-202ENST00000399079 GABARAPL3Q9BY60 117 aa11.92□□□□□ -0.5
HLA-DQB1-202ENST00000399079 PRRG3Q9BZD7 231 aa11.92□□□□□ -0.5
HLA-DQB1-202ENST00000399079 S100A14Q9HCY8 104 aa11.92□□□□□ -0.5
HLA-DQB1-202ENST00000399079 BRD7Q9NPI1 651 aa11.92□□□□□ -0.5
HLA-DQB1-202ENST00000399079 IL19Q9UHD0 177 aa11.92□□□□□ -0.5
HLA-DQB1-202ENST00000399079 ENOPH1Q9UHY7 261 aa11.92□□□□□ -0.5
HLA-DQB1-202ENST00000399079 WIPI2Q9Y4P8 454 aa11.92□□□□□ -0.5
HLA-DQB1-202ENST00000399079 CLDN25C9JDP6 229 aa11.91□□□□□ -0.5
HLA-DQB1-202ENST00000399079 F5H5P2 479 aa11.91□□□□□ -0.5
HLA-DQB1-202ENST00000399079 PSMD9O00233 223 aa11.91□□□□□ -0.5
HLA-DQB1-202ENST00000399079 TBX1O43435 398 aa11.91□□□□□ -0.5
HLA-DQB1-202ENST00000399079 TGFAP01135 160 aa11.91□□□□□ -0.5
HLA-DQB1-202ENST00000399079 SELEP16581 610 aa11.91□□□□□ -0.5
HLA-DQB1-202ENST00000399079 ALOX5APP20292 161 aa11.91□□□□□ -0.5
HLA-DQB1-202ENST00000399079 ZNF121P58317 390 aaPredicted RBP11.91□□□□□ -0.5
HLA-DQB1-202ENST00000399079 AADACL4Q5VUY2 407 aa11.91□□□□□ -0.5
HLA-DQB1-202ENST00000399079 FAM57BQ71RH2 274 aa11.91□□□□□ -0.5
HLA-DQB1-202ENST00000399079 RHOUQ7L0Q8 258 aa11.91□□□□□ -0.5
HLA-DQB1-202ENST00000399079 MEPCEQ7L2J0 689 aaKnown RBP11.91□□□□□ -0.5
HLA-DQB1-202ENST00000399079 ZNF771Q7L3S4 317 aaPredicted RBP11.91□□□□□ -0.5
HLA-DQB1-202ENST00000399079 SLC16A9Q7RTY1 509 aa11.91□□□□□ -0.5
HLA-DQB1-202ENST00000399079 PRSS45Q7RTY3 260 aa11.91□□□□□ -0.5
HLA-DQB1-202ENST00000399079 CBR4Q8N4T8 237 aa11.91□□□□□ -0.5
HLA-DQB1-202ENST00000399079 ZNF454Q8N9F8 522 aa11.91□□□□□ -0.5
HLA-DQB1-202ENST00000399079 SPRYD4Q8WW59 207 aaPredicted RBP11.91□□□□□ -0.5
HLA-DQB1-202ENST00000399079 TTTY10Q9BZA0 68 aa11.91□□□□□ -0.5
HLA-DQB1-202ENST00000399079 TOR3AQ9H497 397 aa11.91□□□□□ -0.5
HLA-DQB1-202ENST00000399079 TMEM100Q9NV29 134 aa11.91□□□□□ -0.5
HLA-DQB1-202ENST00000399079 ZNF319Q9P2F9 582 aa11.91□□□□□ -0.5
HLA-DQB1-202ENST00000399079 LAMP5Q9UJQ1 280 aa11.91□□□□□ -0.5
HLA-DQB1-202ENST00000399079 JMJD1CQ15652 2540 aa11.91□□□□□ -0.5
HLA-DQB1-202ENST00000399079 CD300LBA8K4G0 201 aa11.91□□□□□ -0.5
HLA-DQB1-202ENST00000399079 CRLF1O75462 422 aa11.91□□□□□ -0.5
HLA-DQB1-202ENST00000399079 TNFRSF1AP19438 455 aa11.91□□□□□ -0.5
HLA-DQB1-202ENST00000399079 CA6P23280 308 aa11.91□□□□□ -0.5
HLA-DQB1-202ENST00000399079 ZIK1Q3SY52 487 aaPredicted RBP11.91□□□□□ -0.5
HLA-DQB1-202ENST00000399079 LCN1P1Q5VSP4 162 aa11.91□□□□□ -0.5
HLA-DQB1-202ENST00000399079 NXNL2Q5VZ03 156 aa11.91□□□□□ -0.5
HLA-DQB1-202ENST00000399079 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.91□□□□□ -0.5
HLA-DQB1-202ENST00000399079 C10orf67Q8IYJ2 551 aa11.91□□□□□ -0.5
HLA-DQB1-202ENST00000399079 RFLNBQ8N5W9 214 aa11.91□□□□□ -0.5
HLA-DQB1-202ENST00000399079 HPS1Q92902 700 aa11.91□□□□□ -0.5
HLA-DQB1-202ENST00000399079 SGK3Q96BR1 496 aa11.91□□□□□ -0.5
HLA-DQB1-202ENST00000399079 GCM1Q9NP62 436 aa11.91□□□□□ -0.5
HLA-DQB1-202ENST00000399079 H2AFY2Q9P0M6 372 aaPredicted RBP11.91□□□□□ -0.5
HLA-DQB1-202ENST00000399079 COPS3Q9UNS2 423 aa11.91□□□□□ -0.5
HLA-DQB1-202ENST00000399079 PPP1R3CQ9UQK1 317 aa11.91□□□□□ -0.5
HLA-DQB1-202ENST00000399079 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.9□□□□□ -0.5
HLA-DQB1-202ENST00000399079 A0A1B0GWJ7 208 aa11.9□□□□□ -0.5
HLA-DQB1-202ENST00000399079 GGT3PA6NGU5 568 aa11.9□□□□□ -0.5
HLA-DQB1-202ENST00000399079 PRR32B1ATL7 298 aa11.9□□□□□ -0.5
HLA-DQB1-202ENST00000399079 FAM157AC9JC47 383 aa11.9□□□□□ -0.5
HLA-DQB1-202ENST00000399079 ALDH3A2P51648 485 aa11.9□□□□□ -0.5
HLA-DQB1-202ENST00000399079 LMO4P61968 165 aa11.9□□□□□ -0.5
HLA-DQB1-202ENST00000399079 GFOD2Q3B7J2 385 aa11.9□□□□□ -0.5
HLA-DQB1-202ENST00000399079 FAM166AQ6J272 317 aa11.9□□□□□ -0.5
HLA-DQB1-202ENST00000399079 OR56B2PQ8NGI1 322 aa11.9□□□□□ -0.5
HLA-DQB1-202ENST00000399079 ZNF420Q8TAQ5 688 aaPredicted RBP11.9□□□□□ -0.5
HLA-DQB1-202ENST00000399079 DVL3Q92997 716 aaPredicted RBP11.9□□□□□ -0.5
HLA-DQB1-202ENST00000399079 UBE2FQ969M7 185 aa11.9□□□□□ -0.5
HLA-DQB1-202ENST00000399079 SPSB4Q96A44 273 aa11.9□□□□□ -0.5
HLA-DQB1-202ENST00000399079 REEP6Q96HR9 211 aa11.9□□□□□ -0.5
HLA-DQB1-202ENST00000399079 MEGF10Q96KG7 1140 aa11.9□□□□□ -0.5
HLA-DQB1-202ENST00000399079 SLC29A1Q99808 456 aa11.9□□□□□ -0.5
HLA-DQB1-202ENST00000399079 YIPF3Q9GZM5 350 aa11.9□□□□□ -0.5
HLA-DQB1-202ENST00000399079 TMEM106BQ9NUM4 274 aa11.9□□□□□ -0.5
HLA-DQB1-202ENST00000399079 USE1Q9NZ43 259 aa11.9□□□□□ -0.5
HLA-DQB1-202ENST00000399079 LRP12Q9Y561 859 aa11.9□□□□□ -0.5
HLA-DQB1-202ENST00000399079 DYSFO75923 2080 aa11.89□□□□□ -0.51
HLA-DQB1-202ENST00000399079 SLC22A31A6NKX4 558 aa11.89□□□□□ -0.51
HLA-DQB1-202ENST00000399079 ANKRD65E5RJM6 399 aa11.89□□□□□ -0.51
HLA-DQB1-202ENST00000399079 XRCC2O43543 280 aa11.89□□□□□ -0.51
HLA-DQB1-202ENST00000399079 LMX1BO60663 402 aa11.89□□□□□ -0.51
HLA-DQB1-202ENST00000399079 FAM3AP98173 230 aa11.89□□□□□ -0.51
HLA-DQB1-202ENST00000399079 MAB21L1Q13394 359 aa11.89□□□□□ -0.51
HLA-DQB1-202ENST00000399079 TIGD6Q17RP2 521 aa11.89□□□□□ -0.51
HLA-DQB1-202ENST00000399079 KRT77Q7Z794 578 aa11.89□□□□□ -0.51
HLA-DQB1-202ENST00000399079 PQLC1Q8N2U9 271 aa11.89□□□□□ -0.51
HLA-DQB1-202ENST00000399079 RAB1CQ92928 201 aa11.89□□□□□ -0.51
HLA-DQB1-202ENST00000399079 TIMD4Q96H15 378 aa11.89□□□□□ -0.51
HLA-DQB1-202ENST00000399079 SIGLEC11Q96RL6 698 aa11.89□□□□□ -0.51
HLA-DQB1-202ENST00000399079 CNN2Q99439 309 aaKnown RBP11.89□□□□□ -0.51
HLA-DQB1-202ENST00000399079 LPAR2Q9HBW0 351 aa11.89□□□□□ -0.51
HLA-DQB1-202ENST00000399079 ADGRL4Q9HBW9 690 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms