RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 OR11G2Q8NGC1 345 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 NMNAT2Q9BZQ4 307 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 CST11Q9H112 138 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 VSTM2BA6NLU5 285 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 PRRG2O14669 202 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 NUDT21O43809 227 aaKnown RBP4.42□□□□□ -1.7
SMAD4-202ENST00000398417 IL5P05113 134 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 LPLP06858 475 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 AMY2BP19961 511 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 BDKRB2P30411 391 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 HAAOP46952 286 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 TMEM176BQ3YBM2 270 aaPredicted RBP4.42□□□□□ -1.7
SMAD4-202ENST00000398417 ABHD12BQ7Z5M8 362 aaPredicted RBP4.42□□□□□ -1.7
SMAD4-202ENST00000398417 OR4K15Q8NH41 348 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 ZNF721Q8TF20 911 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 PBOV1Q9GZY1 135 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 ZFP64Q9NPA5 681 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 R4GMQ9 66 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 FAM186AA6NE01 2351 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 MEGF11A6BM72 1044 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 ZNHIT1O43257 154 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 TRAPPC6AO75865 159 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 MPC2O95563 127 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 FCGR2AP12318 317 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 BCKDHBP21953 392 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 RBMXP38159 391 aaKnown RBP4.42□□□□□ -1.7
SMAD4-202ENST00000398417 PRSS12P56730 875 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 GTF2H5Q6ZYL4 71 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 TMEM229BQ8NBD8 167 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 OR51A4Q8NGJ6 313 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 C22orf15Q8WYQ4 148 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 LIN37Q96GY3 246 aaPredicted RBP4.42□□□□□ -1.7
SMAD4-202ENST00000398417 MESP1Q9BRJ9 268 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 MRI1Q9BV20 369 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 ZNF576Q9H609 170 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 NARFLQ9H6Q4 476 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 GPR173Q9NS66 373 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 SPTA1P02549 2419 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 ALG1L2C9J202 215 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 H7C417 338 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 SLC17A2O00624 439 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 CTLA4P16410 223 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 NAGAP17050 411 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 SERPINA2P20848 420 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 RGS19P49795 217 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 SLC37A1P57057 533 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 NXPH1P58417 271 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 ACTBP60709 375 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 ACTG1P63261 375 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 EBPQ15125 230 aaKnown RBP4.42□□□□□ -1.7
SMAD4-202ENST00000398417 INPP5JQ15735 1006 aaPredicted RBP4.42□□□□□ -1.7
SMAD4-202ENST00000398417 SPIN3Q5JUX0 258 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 RAET1LQ5VY80 246 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 H1FNTQ75WM6 255 aaPredicted RBP4.42□□□□□ -1.7
SMAD4-202ENST00000398417 GRINAQ7Z429 371 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 PRSS42Q7Z5A4 293 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 C9orf40Q8IXQ3 194 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 FAM216AQ8WUB2 273 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 ABHD14AQ9BUJ0 271 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 PPA2Q9H2U2 334 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 TXNIPQ9H3M7 391 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 LANCL2Q9NS86 450 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 MTFP1Q9UDX5 166 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 TRBV5-7A0A0A0MS05 114 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 IGHV3-15A0A0B4J1V0 119 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 F5H5K5 113 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 TLX3O43711 291 aaPredicted RBP4.42□□□□□ -1.7
SMAD4-202ENST00000398417 SCRG1O75711 98 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 CYB5AP00167 134 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 HOXB5P09067 269 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 ZNF43P17038 809 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 RAG2P55895 527 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 NR0B2Q15466 257 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.42□□□□□ -1.7
SMAD4-202ENST00000398417 FAM122CQ6P4D5 195 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 VHLLQ6RSH7 139 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 SEZ6L2Q6UXD5 910 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 ZNF546Q86UE3 836 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 ANGPTL5Q86XS5 388 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 OR1J2Q8NGS2 313 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 ANGPTL6Q8NI99 470 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 CMTM3Q96MX0 182 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 OR5B12Q96R08 314 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 SSX3Q99909 188 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 CRB3Q9BUF7 120 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 WWTR1Q9GZV5 400 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 ZNF160Q9HCG1 818 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 ACKR4Q9NPB9 350 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 HPF1Q9NWY4 346 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 SDHAF2Q9NX18 166 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 ZNF230Q9UIE0 474 aaPredicted RBP4.42□□□□□ -1.7
SMAD4-202ENST00000398417 GDF2Q9UK05 429 aaPredicted RBP4.42□□□□□ -1.7
SMAD4-202ENST00000398417 FAM96BQ9Y3D0 163 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 COL6A6A6NMZ7 2263 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 IGHV1OR21-1A0A087WYE8 117 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 TRAV20A0A0B4J274 112 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 TEX51A0A1B0GUA7 166 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 TXNDC12O95881 172 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 TGM6O95932 706 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 ERCC1P07992 297 aaPredicted RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms