RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 KLHL24Q6TFL4 600 aa16.29■□□□□ 0.2
CHRFAM7A-202ENST00000397827 LYPD6Q86Y78 171 aa16.29■□□□□ 0.2
CHRFAM7A-202ENST00000397827 TNFAIP8L1Q8WVP5 186 aa16.29■□□□□ 0.2
CHRFAM7A-202ENST00000397827 MRPS24Q96EL2 167 aaKnown RBP16.29■□□□□ 0.2
CHRFAM7A-202ENST00000397827 C1orf198Q9H425 327 aa16.29■□□□□ 0.2
CHRFAM7A-202ENST00000397827 FARSAQ9Y285 508 aaKnown RBP16.29■□□□□ 0.2
CHRFAM7A-202ENST00000397827 RHBDD3Q9Y3P4 386 aa16.29■□□□□ 0.2
CHRFAM7A-202ENST00000397827 LOC390937A0A1W2PQ73 354 aa16.28■□□□□ 0.2
CHRFAM7A-202ENST00000397827 ATG12O94817 140 aa16.28■□□□□ 0.2
CHRFAM7A-202ENST00000397827 CSN2P05814 226 aa16.28■□□□□ 0.2
CHRFAM7A-202ENST00000397827 SLC2A1P11166 492 aa16.28■□□□□ 0.2
CHRFAM7A-202ENST00000397827 ZNF35P13682 527 aa16.28■□□□□ 0.2
CHRFAM7A-202ENST00000397827 MSX1P28360 303 aa16.28■□□□□ 0.2
CHRFAM7A-202ENST00000397827 TAS2R19P59542 299 aa16.28■□□□□ 0.2
CHRFAM7A-202ENST00000397827 TOMM20Q15388 145 aa16.28■□□□□ 0.2
CHRFAM7A-202ENST00000397827 C3orf33Q6P1S2 294 aa16.28■□□□□ 0.2
CHRFAM7A-202ENST00000397827 ZNF813Q6ZN06 617 aa16.28■□□□□ 0.2
CHRFAM7A-202ENST00000397827 TMED4Q7Z7H5 227 aa16.28■□□□□ 0.2
CHRFAM7A-202ENST00000397827 OR2M3Q8NG83 312 aa16.28■□□□□ 0.2
CHRFAM7A-202ENST00000397827 OR2AK2Q8NG84 335 aa16.28■□□□□ 0.2
CHRFAM7A-202ENST00000397827 OR4S1Q8NGB4 309 aa16.28■□□□□ 0.2
CHRFAM7A-202ENST00000397827 POFUT1Q9H488 388 aa16.28■□□□□ 0.2
CHRFAM7A-202ENST00000397827 KLHL13Q9P2N7 655 aa16.28■□□□□ 0.2
CHRFAM7A-202ENST00000397827 OPN4Q9UHM6 478 aa16.28■□□□□ 0.2
CHRFAM7A-202ENST00000397827 POLR1DQ9Y2S0 133 aa16.28■□□□□ 0.2
CHRFAM7A-202ENST00000397827 WIPF3A6NGB9 483 aa16.28■□□□□ 0.2
CHRFAM7A-202ENST00000397827 L7N2F9 121 aa16.28■□□□□ 0.2
CHRFAM7A-202ENST00000397827 AMY2AP04746 511 aa16.28■□□□□ 0.2
CHRFAM7A-202ENST00000397827 ZNF28P17035 718 aa16.28■□□□□ 0.2
CHRFAM7A-202ENST00000397827 ANOS1P23352 680 aa16.28■□□□□ 0.2
CHRFAM7A-202ENST00000397827 NFYAP23511 347 aaPredicted RBP16.28■□□□□ 0.2
CHRFAM7A-202ENST00000397827 P2RY4P51582 365 aa16.28■□□□□ 0.2
CHRFAM7A-202ENST00000397827 PRKXP51817 358 aa16.28■□□□□ 0.2
CHRFAM7A-202ENST00000397827 SLC25A53Q5H9E4 307 aa16.28■□□□□ 0.2
CHRFAM7A-202ENST00000397827 C1orf100Q5SVJ3 147 aa16.28■□□□□ 0.2
CHRFAM7A-202ENST00000397827 SLC16A13Q7RTY0 426 aa16.28■□□□□ 0.2
CHRFAM7A-202ENST00000397827 HSD17B13Q7Z5P4 300 aaPredicted RBP16.28■□□□□ 0.2
CHRFAM7A-202ENST00000397827 WDSUB1Q8N9V3 476 aa16.28■□□□□ 0.2
CHRFAM7A-202ENST00000397827 SOX7Q9BT81 388 aa16.28■□□□□ 0.2
CHRFAM7A-202ENST00000397827 GDF2Q9UK05 429 aaPredicted RBP16.28■□□□□ 0.2
CHRFAM7A-202ENST00000397827 KLK13Q9UKR3 277 aa16.28■□□□□ 0.2
CHRFAM7A-202ENST00000397827 KCNK7Q9Y2U2 307 aa16.28■□□□□ 0.2
CHRFAM7A-202ENST00000397827 LHFPL6Q9Y693 200 aa16.28■□□□□ 0.2
CHRFAM7A-202ENST00000397827 PGA4P0DJD7 388 aa16.27■□□□□ 0.2
CHRFAM7A-202ENST00000397827 PGA3P0DJD8 388 aa16.27■□□□□ 0.2
CHRFAM7A-202ENST00000397827 BDKRB2P30411 391 aa16.27■□□□□ 0.2
CHRFAM7A-202ENST00000397827 RNF144BQ7Z419 303 aa16.27■□□□□ 0.2
CHRFAM7A-202ENST00000397827 OR1J2Q8NGS2 313 aa16.27■□□□□ 0.2
CHRFAM7A-202ENST00000397827 SPACA9Q96E40 222 aaPredicted RBP16.27■□□□□ 0.2
CHRFAM7A-202ENST00000397827 NKX6-2Q9C056 277 aaPredicted RBP16.27■□□□□ 0.2
CHRFAM7A-202ENST00000397827 TRBV23-1A0A0A0MS06 115 aa16.27■□□□□ 0.2
CHRFAM7A-202ENST00000397827 ARPC5O15511 151 aa16.27■□□□□ 0.2
CHRFAM7A-202ENST00000397827 CYB5AP00167 134 aa16.27■□□□□ 0.2
CHRFAM7A-202ENST00000397827 C4BPBP20851 252 aa16.27■□□□□ 0.2
CHRFAM7A-202ENST00000397827 TMEM176BQ3YBM2 270 aaPredicted RBP16.27■□□□□ 0.2
CHRFAM7A-202ENST00000397827 THEM4Q5T1C6 240 aa16.27■□□□□ 0.2
CHRFAM7A-202ENST00000397827 NKAIN3Q8N8D7 197 aa16.27■□□□□ 0.2
CHRFAM7A-202ENST00000397827 OR13C9Q8NGT0 318 aa16.27■□□□□ 0.2
CHRFAM7A-202ENST00000397827 OR51E1Q8TCB6 317 aa16.27■□□□□ 0.2
CHRFAM7A-202ENST00000397827 SPACA5Q96QH8 159 aa16.27■□□□□ 0.2
CHRFAM7A-202ENST00000397827 DMRTA2Q96SC8 542 aa16.27■□□□□ 0.2
CHRFAM7A-202ENST00000397827 TRAF3IP2O43734 574 aaPredicted RBP16.26■□□□□ 0.19
CHRFAM7A-202ENST00000397827 EIF3GO75821 320 aaKnown RBP eCLIP16.26■□□□□ 0.19
CHRFAM7A-202ENST00000397827 RLN2P04090 185 aa16.26■□□□□ 0.19
CHRFAM7A-202ENST00000397827 ITGB2P05107 769 aa16.26■□□□□ 0.19
CHRFAM7A-202ENST00000397827 SSBP1Q04837 148 aaKnown RBP16.26■□□□□ 0.19
CHRFAM7A-202ENST00000397827 SCGB2B2Q4G0G5 96 aa16.26■□□□□ 0.19
CHRFAM7A-202ENST00000397827 C11orf88Q6PI97 169 aa16.26■□□□□ 0.19
CHRFAM7A-202ENST00000397827 PAQR4Q8N4S7 273 aaPredicted RBP16.26■□□□□ 0.19
CHRFAM7A-202ENST00000397827 TMEM229BQ8NBD8 167 aa16.26■□□□□ 0.19
CHRFAM7A-202ENST00000397827 NOXO1Q8NFA2 376 aa16.26■□□□□ 0.19
CHRFAM7A-202ENST00000397827 MCRIP1C9JLW8 97 aa16.26■□□□□ 0.19
CHRFAM7A-202ENST00000397827 SULT1C2O00338 296 aa16.26■□□□□ 0.19
CHRFAM7A-202ENST00000397827 SMAD9O15198 467 aaKnown RBP16.26■□□□□ 0.19
CHRFAM7A-202ENST00000397827 IGHG1P01857 330 aa16.26■□□□□ 0.19
CHRFAM7A-202ENST00000397827 ZNF806P0C7X5 589 aa16.26■□□□□ 0.19
CHRFAM7A-202ENST00000397827 CLDN6P56747 220 aa16.26■□□□□ 0.19
CHRFAM7A-202ENST00000397827 DHODHQ02127 395 aa16.26■□□□□ 0.19
CHRFAM7A-202ENST00000397827 UNC119Q13432 240 aa16.26■□□□□ 0.19
CHRFAM7A-202ENST00000397827 NKPD1Q17RQ9 610 aa16.26■□□□□ 0.19
CHRFAM7A-202ENST00000397827 MRPL14Q6P1L8 145 aaKnown RBP16.26■□□□□ 0.19
CHRFAM7A-202ENST00000397827 OR4K17Q8NGC6 315 aa16.26■□□□□ 0.19
CHRFAM7A-202ENST00000397827 PNPLA2Q96AD5 504 aa16.26■□□□□ 0.19
CHRFAM7A-202ENST00000397827 DNTTIP1Q9H147 329 aa16.26■□□□□ 0.19
CHRFAM7A-202ENST00000397827 ASH2LQ9UBL3 628 aa16.26■□□□□ 0.19
CHRFAM7A-202ENST00000397827 C19orf25Q9UFG5 118 aaPredicted RBP16.26■□□□□ 0.19
CHRFAM7A-202ENST00000397827 IGLV3-32A0A0A0MS00 114 aa16.26■□□□□ 0.19
CHRFAM7A-202ENST00000397827 ZNF736B4DX44 427 aaPredicted RBP16.26■□□□□ 0.19
CHRFAM7A-202ENST00000397827 D6RAR5 112 aa16.26■□□□□ 0.19
CHRFAM7A-202ENST00000397827 HSD11B1P28845 292 aa16.26■□□□□ 0.19
CHRFAM7A-202ENST00000397827 HFEQ30201 348 aa16.26■□□□□ 0.19
CHRFAM7A-202ENST00000397827 TMEM88Q6PEY1 159 aa16.26■□□□□ 0.19
CHRFAM7A-202ENST00000397827 RAB11FIP2Q7L804 512 aa16.26■□□□□ 0.19
CHRFAM7A-202ENST00000397827 RTN4RL2Q86UN3 420 aa16.26■□□□□ 0.19
CHRFAM7A-202ENST00000397827 COMMD2Q86X83 199 aa16.26■□□□□ 0.19
CHRFAM7A-202ENST00000397827 CHST4Q8NCG5 386 aa16.26■□□□□ 0.19
CHRFAM7A-202ENST00000397827 OR1M1Q8NGA1 313 aa16.26■□□□□ 0.19
CHRFAM7A-202ENST00000397827 SGK3Q96BR1 496 aa16.26■□□□□ 0.19
CHRFAM7A-202ENST00000397827 GAREM1Q9H706 876 aa16.26■□□□□ 0.19
CHRFAM7A-202ENST00000397827 B3GALT1Q9Y5Z6 326 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms