RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 SDK2Q58EX2 2172 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 A0A087WUJ7 227 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 C7orf77A4D0Y5 90 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 IFITM5A6NNB3 132 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 VSTM5A8MXK1 200 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 MKRN2OSH3BPM6 223 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 M0R036 132 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 CRTAPO75718 401 aaPredicted RBP4.51□□□□□ -1.69
SSR1-202ENST00000397511 PMP2P02689 132 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 TACR3P29371 465 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 CCKBRP32239 447 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 CEACAM6P40199 344 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 SLC26A5P58743 744 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 LSM6P62312 80 aaKnown RBP4.51□□□□□ -1.69
SSR1-202ENST00000397511 ACTA2P62736 377 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 EIF5AP63241 154 aaKnown RBP4.51□□□□□ -1.69
SSR1-202ENST00000397511 ACTG2P63267 376 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 NAAAQ02083 359 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 HGFACQ04756 655 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 LTBQ06643 244 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 FZD2Q14332 565 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 TGIF1Q15583 401 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 AWAT1Q58HT5 328 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 RNASE10Q5GAN6 216 aaKnown RBP4.51□□□□□ -1.69
SSR1-202ENST00000397511 THEM4Q5T1C6 240 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 COL13A1Q5TAT6 717 aaPredicted RBP4.51□□□□□ -1.69
SSR1-202ENST00000397511 SPNS3Q6ZMD2 512 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 MARCH3Q86UD3 253 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 FAM24BQ8N5W8 94 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 SLC30A7Q8NEW0 376 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 OR51D1Q8NGF3 324 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 NUBPLQ8TB37 319 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 GPR119Q8TDV5 335 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 DTD1Q8TEA8 209 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 TMED6Q8WW62 240 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 SLC25A38Q96DW6 304 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 TCTN2Q96GX1 697 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 CDCA3Q99618 268 aaPredicted RBP4.51□□□□□ -1.69
SSR1-202ENST00000397511 MRI1Q9BV20 369 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 GPR61Q9BZJ8 451 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 OPN3Q9H1Y3 402 aaPredicted RBP4.51□□□□□ -1.69
SSR1-202ENST00000397511 FN3KRPQ9HA64 309 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.51□□□□□ -1.69
SSR1-202ENST00000397511 LPAR3Q9UBY5 353 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 KCNG2Q9UJ96 466 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 TIMM10BQ9Y5J6 103 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 IGKV1D-42A0A075B6H8 117 aa4.5□□□□□ -1.69
SSR1-202ENST00000397511 IFITM10A6NMD0 228 aa4.5□□□□□ -1.69
SSR1-202ENST00000397511 F8VVB4 439 aa4.5□□□□□ -1.69
SSR1-202ENST00000397511 F8VWA3 439 aa4.5□□□□□ -1.69
SSR1-202ENST00000397511 H0YIG0 161 aa4.5□□□□□ -1.69
SSR1-202ENST00000397511 SCDO00767 359 aa4.5□□□□□ -1.69
SSR1-202ENST00000397511 TMEM127O75204 238 aa4.5□□□□□ -1.69
SSR1-202ENST00000397511 MPZL1O95297 269 aa4.5□□□□□ -1.69
SSR1-202ENST00000397511 RAB3DO95716 219 aa4.5□□□□□ -1.69
SSR1-202ENST00000397511 AK1P00568 194 aa4.5□□□□□ -1.69
SSR1-202ENST00000397511 CRYABP02511 175 aaKnown RBP4.5□□□□□ -1.69
SSR1-202ENST00000397511 CD14P08571 375 aa4.5□□□□□ -1.69
SSR1-202ENST00000397511 ITGA5P08648 1049 aa4.5□□□□□ -1.69
SSR1-202ENST00000397511 AKAIN1P0CW23 69 aa4.5□□□□□ -1.69
SSR1-202ENST00000397511 ADRA2CP18825 462 aa4.5□□□□□ -1.69
SSR1-202ENST00000397511 NME2P22392 152 aa4.5□□□□□ -1.69
SSR1-202ENST00000397511 CD34P28906 385 aa4.5□□□□□ -1.69
SSR1-202ENST00000397511 MAP3K8P41279 467 aa4.5□□□□□ -1.69
SSR1-202ENST00000397511 EIF1AXP47813 144 aaKnown RBP4.5□□□□□ -1.69
SSR1-202ENST00000397511 DIO1P49895 249 aa4.5□□□□□ -1.69
SSR1-202ENST00000397511 PRKXP51817 358 aa4.5□□□□□ -1.69
SSR1-202ENST00000397511 EFNB2P52799 333 aa4.5□□□□□ -1.69
SSR1-202ENST00000397511 TAS2R20P59543 309 aa4.5□□□□□ -1.69
SSR1-202ENST00000397511 EGR4Q05215 589 aa4.5□□□□□ -1.69
SSR1-202ENST00000397511 RPL18Q07020 188 aaKnown RBP4.5□□□□□ -1.69
SSR1-202ENST00000397511 SRSF4Q08170 494 aaKnown RBP4.5□□□□□ -1.69
SSR1-202ENST00000397511 ACTBL2Q562R1 376 aa4.5□□□□□ -1.69
SSR1-202ENST00000397511 RPL22L1Q6P5R6 122 aaKnown RBP4.5□□□□□ -1.69
SSR1-202ENST00000397511 STAC2Q6ZMT1 411 aa4.5□□□□□ -1.69
SSR1-202ENST00000397511 ZNF550Q7Z398 422 aa4.5□□□□□ -1.69
SSR1-202ENST00000397511 FAM220AQ7Z4H9 259 aa4.5□□□□□ -1.69
SSR1-202ENST00000397511 ACBD4Q8NC06 268 aa4.5□□□□□ -1.69
SSR1-202ENST00000397511 OR5AK2Q8NH90 309 aa4.5□□□□□ -1.69
SSR1-202ENST00000397511 PPP1R1CQ8WVI7 109 aa4.5□□□□□ -1.69
SSR1-202ENST00000397511 TSEN15Q8WW01 171 aaKnown RBP4.5□□□□□ -1.69
SSR1-202ENST00000397511 AKR1E2Q96JD6 320 aa4.5□□□□□ -1.69
SSR1-202ENST00000397511 NOL4LQ96MY1 436 aaPredicted RBP4.5□□□□□ -1.69
SSR1-202ENST00000397511 LPAR4Q99677 370 aa4.5□□□□□ -1.69
SSR1-202ENST00000397511 LRRC61Q9BV99 259 aa4.5□□□□□ -1.69
SSR1-202ENST00000397511 OR11A1Q9GZK7 315 aa4.5□□□□□ -1.69
SSR1-202ENST00000397511 ATG5Q9H1Y0 275 aa4.5□□□□□ -1.69
SSR1-202ENST00000397511 POFUT1Q9H488 388 aa4.5□□□□□ -1.69
SSR1-202ENST00000397511 MYOZ1Q9NP98 299 aaPredicted RBP4.5□□□□□ -1.69
SSR1-202ENST00000397511 SIRT7Q9NRC8 400 aa4.5□□□□□ -1.69
SSR1-202ENST00000397511 ZDHHC8Q9ULC8 765 aa4.5□□□□□ -1.69
SSR1-202ENST00000397511 SLC22A13Q9Y226 551 aa4.5□□□□□ -1.69
SSR1-202ENST00000397511 MRPS33Q9Y291 106 aaKnown RBP4.5□□□□□ -1.69
SSR1-202ENST00000397511 POMT1Q9Y6A1 747 aa4.5□□□□□ -1.69
SSR1-202ENST00000397511 V9GY05 133 aa4.5□□□□□ -1.69
SSR1-202ENST00000397511 ATG2AQ2TAZ0 1938 aa4.5□□□□□ -1.69
SSR1-202ENST00000397511 TRIOBPQ9H2D6 2365 aa4.5□□□□□ -1.69
SSR1-202ENST00000397511 SPTY2D1-AS1A0A0U1RR47 76 aa4.5□□□□□ -1.69
SSR1-202ENST00000397511 A0A1B0GTI1 187 aa4.5□□□□□ -1.69
SSR1-202ENST00000397511 DCDC2BA2VCK2 349 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms