RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 ANOS1P23352 680 aa25.08■■□□□ 1.61
CHCHD4-202ENST00000396914 MAGEB1P43366 347 aa25.08■■□□□ 1.61
CHCHD4-202ENST00000396914 PSMA6P60900 246 aaKnown RBP25.08■■□□□ 1.61
CHCHD4-202ENST00000396914 ROM1Q03395 351 aa25.08■■□□□ 1.61
CHCHD4-202ENST00000396914 ZNF92Q03936 586 aa25.08■■□□□ 1.61
CHCHD4-202ENST00000396914 IL18R1Q13478 541 aa25.08■■□□□ 1.61
CHCHD4-202ENST00000396914 RIPK1Q13546 671 aa25.08■■□□□ 1.61
CHCHD4-202ENST00000396914 CLEC2AQ6UVW9 174 aa25.08■■□□□ 1.61
CHCHD4-202ENST00000396914 OR52H1Q8NGJ2 320 aa25.08■■□□□ 1.61
CHCHD4-202ENST00000396914 CNIH3Q8TBE1 160 aa25.08■■□□□ 1.61
CHCHD4-202ENST00000396914 APH1BQ8WW43 257 aa25.08■■□□□ 1.61
CHCHD4-202ENST00000396914 DECR2Q9NUI1 292 aa25.08■■□□□ 1.61
CHCHD4-202ENST00000396914 GTF2A1LQ9UNN4 478 aa25.08■■□□□ 1.61
CHCHD4-202ENST00000396914 AKAP9Q99996 3911 aa25.07■■□□□ 1.6
CHCHD4-202ENST00000396914 TMEM269A0A1B0GVZ9 245 aa25.07■■□□□ 1.6
CHCHD4-202ENST00000396914 XRCC2O43543 280 aa25.07■■□□□ 1.6
CHCHD4-202ENST00000396914 KRT8P05787 483 aa25.07■■□□□ 1.6
CHCHD4-202ENST00000396914 DAOP14920 347 aa25.07■■□□□ 1.6
CHCHD4-202ENST00000396914 AQP4P55087 323 aa25.07■■□□□ 1.6
CHCHD4-202ENST00000396914 CCL8P80075 99 aa25.07■■□□□ 1.6
CHCHD4-202ENST00000396914 EGR3Q06889 387 aa25.07■■□□□ 1.6
CHCHD4-202ENST00000396914 SPNS3Q6ZMD2 512 aa25.07■■□□□ 1.6
CHCHD4-202ENST00000396914 SSX6Q7RTT6 188 aa25.07■■□□□ 1.6
CHCHD4-202ENST00000396914 C8orf59Q8N0T1 100 aaPredicted RBP25.07■■□□□ 1.6
CHCHD4-202ENST00000396914 SPRYD4Q8WW59 207 aaPredicted RBP25.07■■□□□ 1.6
CHCHD4-202ENST00000396914 RPL36Q9Y3U8 105 aaKnown RBP25.07■■□□□ 1.6
CHCHD4-202ENST00000396914 DAPL1A0PJW8 107 aa25.06■■□□□ 1.6
CHCHD4-202ENST00000396914 GGT3PA6NGU5 568 aa25.06■■□□□ 1.6
CHCHD4-202ENST00000396914 ZSCAN5BA6NJL1 495 aa25.06■■□□□ 1.6
CHCHD4-202ENST00000396914 ACTC1P68032 377 aa25.06■■□□□ 1.6
CHCHD4-202ENST00000396914 ACTA1P68133 377 aa25.06■■□□□ 1.6
CHCHD4-202ENST00000396914 ZNF829Q3KNS6 432 aaPredicted RBP25.06■■□□□ 1.6
CHCHD4-202ENST00000396914 PCGF3Q3KNV8 242 aa25.06■■□□□ 1.6
CHCHD4-202ENST00000396914 YIPF7Q8N8F6 280 aa25.06■■□□□ 1.6
CHCHD4-202ENST00000396914 LGALS12Q96DT0 336 aa25.06■■□□□ 1.6
CHCHD4-202ENST00000396914 PCDHGB1Q9Y5G3 927 aa25.06■■□□□ 1.6
CHCHD4-202ENST00000396914 GNAO1P09471 354 aa25.05■■□□□ 1.6
CHCHD4-202ENST00000396914 SMN1Q16637 294 aaKnown RBP25.05■■□□□ 1.6
CHCHD4-202ENST00000396914 C6orf52Q5T4I8 152 aa25.05■■□□□ 1.6
CHCHD4-202ENST00000396914 TGIF2LYQ8IUE0 185 aa25.05■■□□□ 1.6
CHCHD4-202ENST00000396914 OR2Z1Q8NG97 314 aa25.05■■□□□ 1.6
CHCHD4-202ENST00000396914 REEP6Q96HR9 211 aa25.05■■□□□ 1.6
CHCHD4-202ENST00000396914 RHNO1Q9BSD3 238 aa25.05■■□□□ 1.6
CHCHD4-202ENST00000396914 ZDHHC8Q9ULC8 765 aa25.05■■□□□ 1.6
CHCHD4-202ENST00000396914 WBP4O75554 376 aaKnown RBP25.04■■□□□ 1.6
CHCHD4-202ENST00000396914 IGHV1-46P01743 117 aa25.04■■□□□ 1.6
CHCHD4-202ENST00000396914 PLEKHG7Q6ZR37 379 aa25.04■■□□□ 1.6
CHCHD4-202ENST00000396914 PRSS45Q7RTY3 260 aa25.04■■□□□ 1.6
CHCHD4-202ENST00000396914 OR8G5Q8NG78 346 aa25.04■■□□□ 1.6
CHCHD4-202ENST00000396914 UBASH3BQ8TF42 649 aa25.04■■□□□ 1.6
CHCHD4-202ENST00000396914 FAM168AQ92567 244 aa25.04■■□□□ 1.6
CHCHD4-202ENST00000396914 SGK3Q96BR1 496 aa25.04■■□□□ 1.6
CHCHD4-202ENST00000396914 MRM2Q9UI43 246 aaKnown RBP25.04■■□□□ 1.6
CHCHD4-202ENST00000396914 TRIM64A6NGJ6 449 aa25.03■■□□□ 1.6
CHCHD4-202ENST00000396914 TRIM64BA6NI03 449 aa25.03■■□□□ 1.6
CHCHD4-202ENST00000396914 RRP9O43818 475 aaKnown RBP25.03■■□□□ 1.6
CHCHD4-202ENST00000396914 RPP14O95059 124 aaKnown RBP25.03■■□□□ 1.6
CHCHD4-202ENST00000396914 HPXP02790 462 aa25.03■■□□□ 1.6
CHCHD4-202ENST00000396914 PDLIM4P50479 330 aa25.03■■□□□ 1.6
CHCHD4-202ENST00000396914 DSCR9P59020 149 aa25.03■■□□□ 1.6
CHCHD4-202ENST00000396914 OPA3Q9H6K4 179 aa25.03■■□□□ 1.6
CHCHD4-202ENST00000396914 EXOGQ9Y2C4 368 aaKnown RBP25.03■■□□□ 1.6
CHCHD4-202ENST00000396914 HSPE1-MOB4S4R3N1 261 aa25.03■■□□□ 1.6
CHCHD4-202ENST00000396914 IQCF6A8MYZ5 107 aa25.03■■□□□ 1.6
CHCHD4-202ENST00000396914 FADS2O95864 444 aaKnown RBP25.03■■□□□ 1.6
CHCHD4-202ENST00000396914 CSF3P09919 207 aa25.03■■□□□ 1.6
CHCHD4-202ENST00000396914 TNFSF4P23510 183 aa25.03■■□□□ 1.6
CHCHD4-202ENST00000396914 DCTDP32321 178 aa25.03■■□□□ 1.6
CHCHD4-202ENST00000396914 ISL1P61371 349 aa25.03■■□□□ 1.6
CHCHD4-202ENST00000396914 ZNF85Q03923 595 aa25.03■■□□□ 1.6
CHCHD4-202ENST00000396914 KLHL22Q53GT1 634 aa25.03■■□□□ 1.6
CHCHD4-202ENST00000396914 FAM220AQ7Z4H9 259 aa25.03■■□□□ 1.6
CHCHD4-202ENST00000396914 COMMD2Q86X83 199 aa25.03■■□□□ 1.6
CHCHD4-202ENST00000396914 ACBD7Q8N6N7 88 aa25.03■■□□□ 1.6
CHCHD4-202ENST00000396914 TFAP2CQ92754 450 aa25.03■■□□□ 1.6
CHCHD4-202ENST00000396914 ELMOD3Q96FG2 381 aa25.03■■□□□ 1.6
CHCHD4-202ENST00000396914 DIRC2Q96SL1 478 aa25.03■■□□□ 1.6
CHCHD4-202ENST00000396914 REPIN1Q9BWE0 567 aaKnown RBP25.03■■□□□ 1.6
CHCHD4-202ENST00000396914 MYOZ1Q9NP98 299 aaPredicted RBP25.03■■□□□ 1.6
CHCHD4-202ENST00000396914 ZNF319Q9P2F9 582 aa25.03■■□□□ 1.6
CHCHD4-202ENST00000396914 GNG8Q9UK08 70 aa25.03■■□□□ 1.6
CHCHD4-202ENST00000396914 METTL15A6NJ78 407 aa25.02■■□□□ 1.6
CHCHD4-202ENST00000396914 CD300LBA8K4G0 201 aa25.02■■□□□ 1.6
CHCHD4-202ENST00000396914 LOC110117498-PIK3R3F6TDL0 507 aa25.02■■□□□ 1.6
CHCHD4-202ENST00000396914 LYNX1G3V0Z9 82 aa25.02■■□□□ 1.6
CHCHD4-202ENST00000396914 H0YJX3 145 aa25.02■■□□□ 1.6
CHCHD4-202ENST00000396914 NCR1O76036 304 aa25.02■■□□□ 1.6
CHCHD4-202ENST00000396914 LYNX1P0DP58 116 aa25.02■■□□□ 1.6
CHCHD4-202ENST00000396914 CFL1P23528 166 aaKnown RBP25.02■■□□□ 1.6
CHCHD4-202ENST00000396914 TNK1Q13470 666 aa25.02■■□□□ 1.6
CHCHD4-202ENST00000396914 IZUMO2Q6UXV1 221 aa25.02■■□□□ 1.6
CHCHD4-202ENST00000396914 Q6ZR03 302 aa25.02■■□□□ 1.6
CHCHD4-202ENST00000396914 OR8B12Q8NGG6 310 aa25.02■■□□□ 1.6
CHCHD4-202ENST00000396914 OR13G1Q8NGZ3 307 aa25.02■■□□□ 1.6
CHCHD4-202ENST00000396914 EGLN1Q9GZT9 426 aa25.02■■□□□ 1.6
CHCHD4-202ENST00000396914 SAP30LQ9HAJ7 183 aa25.02■■□□□ 1.6
CHCHD4-202ENST00000396914 TMEM100Q9NV29 134 aa25.02■■□□□ 1.6
CHCHD4-202ENST00000396914 FAM206AQ9NX38 181 aa25.02■■□□□ 1.6
CHCHD4-202ENST00000396914 NKIRAS2Q9NYR9 191 aa25.02■■□□□ 1.6
CHCHD4-202ENST00000396914 LILRA1O75019 489 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms