RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 HDHD2Q9H0R4 259 aa6.88□□□□□ -1.31
SCFD1-202ENST00000396629 MEGF9Q9H1U4 602 aa6.88□□□□□ -1.31
SCFD1-202ENST00000396629 KAT8Q9H7Z6 458 aaKnown RBP6.88□□□□□ -1.31
SCFD1-202ENST00000396629 RAB18Q9NP72 206 aa6.88□□□□□ -1.31
SCFD1-202ENST00000396629 COA3Q9Y2R0 106 aaPredicted RBP6.88□□□□□ -1.31
SCFD1-202ENST00000396629 SH3GLB1Q9Y371 365 aa6.88□□□□□ -1.31
SCFD1-202ENST00000396629 TRAV27A0A087WT01 109 aa6.87□□□□□ -1.31
SCFD1-202ENST00000396629 A0A1B0GW55 424 aa6.87□□□□□ -1.31
SCFD1-202ENST00000396629 WI2-2373I1.2A0A1W2PRP0 233 aa6.87□□□□□ -1.31
SCFD1-202ENST00000396629 CD14P08571 375 aa6.87□□□□□ -1.31
SCFD1-202ENST00000396629 ACSM4P0C7M7 580 aa6.87□□□□□ -1.31
SCFD1-202ENST00000396629 DUX4L2P0CJ85 424 aa6.87□□□□□ -1.31
SCFD1-202ENST00000396629 DUX4L3P0CJ86 424 aa6.87□□□□□ -1.31
SCFD1-202ENST00000396629 DUX4L4P0CJ87 422 aa6.87□□□□□ -1.31
SCFD1-202ENST00000396629 DUX4L5P0CJ88 424 aa6.87□□□□□ -1.31
SCFD1-202ENST00000396629 DUX4L6P0CJ89 424 aa6.87□□□□□ -1.31
SCFD1-202ENST00000396629 DUX4L7P0CJ90 424 aa6.87□□□□□ -1.31
SCFD1-202ENST00000396629 CA6P23280 308 aa6.87□□□□□ -1.31
SCFD1-202ENST00000396629 SLC9A3P48764 834 aa6.87□□□□□ -1.31
SCFD1-202ENST00000396629 GZMMP51124 257 aa6.87□□□□□ -1.31
SCFD1-202ENST00000396629 MTPNP58546 118 aa6.87□□□□□ -1.31
SCFD1-202ENST00000396629 PRKCDQ05655 676 aa6.87□□□□□ -1.31
SCFD1-202ENST00000396629 LY6EQ16553 131 aa6.87□□□□□ -1.31
SCFD1-202ENST00000396629 AANATQ16613 207 aa6.87□□□□□ -1.31
SCFD1-202ENST00000396629 AGKQ53H12 422 aa6.87□□□□□ -1.31
SCFD1-202ENST00000396629 DEFB121Q5J5C9 76 aa6.87□□□□□ -1.31
SCFD1-202ENST00000396629 PGBD2Q6P3X8 592 aa6.87□□□□□ -1.31
SCFD1-202ENST00000396629 DUX4L9Q6RFH8 374 aaPredicted RBP6.87□□□□□ -1.31
SCFD1-202ENST00000396629 FAM122BQ7Z309 247 aa6.87□□□□□ -1.31
SCFD1-202ENST00000396629 SLC7A13Q8TCU3 470 aa6.87□□□□□ -1.31
SCFD1-202ENST00000396629 SPRYD4Q8WW59 207 aaPredicted RBP6.87□□□□□ -1.31
SCFD1-202ENST00000396629 SLCO4A1Q96BD0 722 aa6.87□□□□□ -1.31
SCFD1-202ENST00000396629 AJUBAQ96IF1 538 aa6.87□□□□□ -1.31
SCFD1-202ENST00000396629 Q96M85 177 aa6.87□□□□□ -1.31
SCFD1-202ENST00000396629 CGREF1Q99674 301 aa6.87□□□□□ -1.31
SCFD1-202ENST00000396629 B9D2Q9BPU9 175 aa6.87□□□□□ -1.31
SCFD1-202ENST00000396629 DCTN5Q9BTE1 182 aa6.87□□□□□ -1.31
SCFD1-202ENST00000396629 FAM234AQ9H0X4 552 aa6.87□□□□□ -1.31
SCFD1-202ENST00000396629 SERTAD4Q9NUC0 356 aa6.87□□□□□ -1.31
SCFD1-202ENST00000396629 C1orf123Q9NWV4 160 aa6.87□□□□□ -1.31
SCFD1-202ENST00000396629 GRHPRQ9UBQ7 328 aa6.87□□□□□ -1.31
SCFD1-202ENST00000396629 DUX4Q9UBX2 424 aa6.87□□□□□ -1.31
SCFD1-202ENST00000396629 PRPF19Q9UMS4 504 aaKnown RBP6.87□□□□□ -1.31
SCFD1-202ENST00000396629 ADAM18Q9Y3Q7 739 aa6.87□□□□□ -1.31
SCFD1-202ENST00000396629 LHFPL6Q9Y693 200 aa6.87□□□□□ -1.31
SCFD1-202ENST00000396629 IGHV3OR15-7A0A075B7D8 119 aa6.86□□□□□ -1.31
SCFD1-202ENST00000396629 XKRYO14609 159 aa6.86□□□□□ -1.31
SCFD1-202ENST00000396629 SHOX2O60902 331 aaPredicted RBP6.86□□□□□ -1.31
SCFD1-202ENST00000396629 CD33P20138 364 aa6.86□□□□□ -1.31
SCFD1-202ENST00000396629 POU4F2Q12837 409 aa6.86□□□□□ -1.31
SCFD1-202ENST00000396629 VMACQ2NL98 169 aa6.86□□□□□ -1.31
SCFD1-202ENST00000396629 ZNF826PQ6ZT77 177 aa6.86□□□□□ -1.31
SCFD1-202ENST00000396629 PGAP1Q75T13 922 aa6.86□□□□□ -1.31
SCFD1-202ENST00000396629 DHDDSQ86SQ9 333 aa6.86□□□□□ -1.31
SCFD1-202ENST00000396629 OAFQ86UD1 273 aa6.86□□□□□ -1.31
SCFD1-202ENST00000396629 MICU2Q8IYU8 434 aa6.86□□□□□ -1.31
SCFD1-202ENST00000396629 Q8N2B8 174 aa6.86□□□□□ -1.31
SCFD1-202ENST00000396629 MREGQ8N565 214 aa6.86□□□□□ -1.31
SCFD1-202ENST00000396629 DPP10Q8N608 796 aa6.86□□□□□ -1.31
SCFD1-202ENST00000396629 ACOT11Q8WXI4 607 aaPredicted RBP6.86□□□□□ -1.31
SCFD1-202ENST00000396629 CCL13Q99616 98 aa6.86□□□□□ -1.31
SCFD1-202ENST00000396629 CITED2Q99967 270 aaPredicted RBP6.86□□□□□ -1.31
SCFD1-202ENST00000396629 ADAT1Q9BUB4 502 aaKnown RBP6.86□□□□□ -1.31
SCFD1-202ENST00000396629 NPFFR1Q9GZQ6 430 aa6.86□□□□□ -1.31
SCFD1-202ENST00000396629 VSX1Q9NZR4 365 aaPredicted RBP6.86□□□□□ -1.31
SCFD1-202ENST00000396629 BAG5Q9UL15 447 aa6.86□□□□□ -1.31
SCFD1-202ENST00000396629 AURKCQ9UQB9 309 aa6.86□□□□□ -1.31
SCFD1-202ENST00000396629 RYR2Q92736 4967 aa6.86□□□□□ -1.31
SCFD1-202ENST00000396629 CD300LBA8K4G0 201 aa6.86□□□□□ -1.31
SCFD1-202ENST00000396629 EFCAB9A8MZ26 197 aa6.86□□□□□ -1.31
SCFD1-202ENST00000396629 SLC16A7O60669 478 aa6.86□□□□□ -1.31
SCFD1-202ENST00000396629 MUC1P15941 1255 aaPredicted RBP6.86□□□□□ -1.31
SCFD1-202ENST00000396629 ZNF26P17031 533 aaPredicted RBP6.86□□□□□ -1.31
SCFD1-202ENST00000396629 TGM4P49221 684 aa6.86□□□□□ -1.31
SCFD1-202ENST00000396629 KRTAP10-11P60412 298 aa6.86□□□□□ -1.31
SCFD1-202ENST00000396629 ELF3P78545 371 aaPredicted RBP6.86□□□□□ -1.31
SCFD1-202ENST00000396629 CD69Q07108 199 aa6.86□□□□□ -1.31
SCFD1-202ENST00000396629 ST3GAL3Q11203 375 aa6.86□□□□□ -1.31
SCFD1-202ENST00000396629 MALLQ13021 153 aa6.86□□□□□ -1.31
SCFD1-202ENST00000396629 LRRC75BQ2VPJ9 315 aa6.86□□□□□ -1.31
SCFD1-202ENST00000396629 ZBTB37Q5TC79 503 aa6.86□□□□□ -1.31
SCFD1-202ENST00000396629 NCR3LG1Q68D85 454 aa6.86□□□□□ -1.31
SCFD1-202ENST00000396629 PGM2L1Q6PCE3 622 aa6.86□□□□□ -1.31
SCFD1-202ENST00000396629 LIAT1Q6ZQX7 453 aa6.86□□□□□ -1.31
SCFD1-202ENST00000396629 NAA40Q86UY6 237 aa6.86□□□□□ -1.31
SCFD1-202ENST00000396629 OR13C2Q8NGS9 318 aa6.86□□□□□ -1.31
SCFD1-202ENST00000396629 C17orf50Q8WW18 174 aa6.86□□□□□ -1.31
SCFD1-202ENST00000396629 RORBQ92753 470 aa6.86□□□□□ -1.31
SCFD1-202ENST00000396629 ZNF570Q96NI8 536 aa6.86□□□□□ -1.31
SCFD1-202ENST00000396629 CCDC28BQ9BUN5 200 aa6.86□□□□□ -1.31
SCFD1-202ENST00000396629 ZNF702PQ9H963 129 aa6.86□□□□□ -1.31
SCFD1-202ENST00000396629 DNAJB11Q9UBS4 358 aa6.86□□□□□ -1.31
SCFD1-202ENST00000396629 A4GNTQ9UNA3 340 aa6.86□□□□□ -1.31
SCFD1-202ENST00000396629 NDUFAF1Q9Y375 327 aa6.86□□□□□ -1.31
SCFD1-202ENST00000396629 M0R1W7 72 aa6.85□□□□□ -1.31
SCFD1-202ENST00000396629 IMPA2O14732 288 aa6.85□□□□□ -1.31
SCFD1-202ENST00000396629 CHST1O43916 411 aa6.85□□□□□ -1.31
SCFD1-202ENST00000396629 GRPP07492 148 aa6.85□□□□□ -1.31
SCFD1-202ENST00000396629 FAHP16930 419 aa6.85□□□□□ -1.31
SCFD1-202ENST00000396629 MSX2P35548 267 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms