RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 PTPRGP23470 1445 aa4.03□□□□□ -1.76
GABPB1-204ENST00000396464 USP6P35125 1406 aa4.03□□□□□ -1.76
GABPB1-204ENST00000396464 VPS8Q8N3P4 1428 aa4.03□□□□□ -1.76
GABPB1-204ENST00000396464 CEMIPQ8WUJ3 1361 aa4.03□□□□□ -1.76
GABPB1-204ENST00000396464 KIF14Q15058 1648 aa4.03□□□□□ -1.76
GABPB1-204ENST00000396464 ZCCHC11Q5TAX3 1644 aaKnown RBP4.03□□□□□ -1.76
GABPB1-204ENST00000396464 SUPT6HQ7KZ85 1726 aaKnown RBP4.03□□□□□ -1.76
GABPB1-204ENST00000396464 C9orf84Q5VXU9 1444 aa4.03□□□□□ -1.76
GABPB1-204ENST00000396464 IGKV2D-30A0A075B6S6 120 aa4.03□□□□□ -1.76
GABPB1-204ENST00000396464 IGHV3-20A0A0C4DH32 117 aa4.03□□□□□ -1.76
GABPB1-204ENST00000396464 ISPDA4D126 451 aa4.03□□□□□ -1.76
GABPB1-204ENST00000396464 SCRG1O75711 98 aa4.03□□□□□ -1.76
GABPB1-204ENST00000396464 SLC2A10O95528 541 aa4.03□□□□□ -1.76
GABPB1-204ENST00000396464 RLN2P04090 185 aa4.03□□□□□ -1.76
GABPB1-204ENST00000396464 IFNA16P05015 189 aa4.03□□□□□ -1.76
GABPB1-204ENST00000396464 EDN1P05305 212 aa4.03□□□□□ -1.76
GABPB1-204ENST00000396464 MELTFP08582 738 aa4.03□□□□□ -1.76
GABPB1-204ENST00000396464 CCDC166P0CW27 439 aa4.03□□□□□ -1.76
GABPB1-204ENST00000396464 THRAP10827 490 aa4.03□□□□□ -1.76
GABPB1-204ENST00000396464 SLC2A1P11166 492 aa4.03□□□□□ -1.76
GABPB1-204ENST00000396464 FOLR1P15328 257 aa4.03□□□□□ -1.76
GABPB1-204ENST00000396464 IGFBP5P24593 272 aa4.03□□□□□ -1.76
GABPB1-204ENST00000396464 RPS12P25398 132 aaKnown RBP4.03□□□□□ -1.76
GABPB1-204ENST00000396464 HTR1DP28221 377 aa4.03□□□□□ -1.76
GABPB1-204ENST00000396464 SHMT2P34897 504 aa4.03□□□□□ -1.76
GABPB1-204ENST00000396464 ARL2P36404 184 aa4.03□□□□□ -1.76
GABPB1-204ENST00000396464 GALR1P47211 349 aa4.03□□□□□ -1.76
GABPB1-204ENST00000396464 OMPP47874 163 aa4.03□□□□□ -1.76
GABPB1-204ENST00000396464 HOXA1P49639 335 aaPredicted RBP4.03□□□□□ -1.76
GABPB1-204ENST00000396464 CSRP3P50461 194 aa4.03□□□□□ -1.76
GABPB1-204ENST00000396464 ZNF121P58317 390 aaPredicted RBP4.03□□□□□ -1.76
GABPB1-204ENST00000396464 KRTAP10-7P60409 375 aaPredicted RBP4.03□□□□□ -1.76
GABPB1-204ENST00000396464 MRPS11P82912 194 aaKnown RBP4.03□□□□□ -1.76
GABPB1-204ENST00000396464 PUDPQ08623 228 aa4.03□□□□□ -1.76
GABPB1-204ENST00000396464 TRIP13Q15645 432 aaPredicted RBP4.03□□□□□ -1.76
GABPB1-204ENST00000396464 NSUN5P1Q3KNT7 163 aa4.03□□□□□ -1.76
GABPB1-204ENST00000396464 ZCWPW2Q504Y3 356 aa4.03□□□□□ -1.76
GABPB1-204ENST00000396464 MARC1Q5VT66 337 aa4.03□□□□□ -1.76
GABPB1-204ENST00000396464 LRRN1Q6UXK5 716 aa4.03□□□□□ -1.76
GABPB1-204ENST00000396464 FAM92BQ6ZTR7 304 aa4.03□□□□□ -1.76
GABPB1-204ENST00000396464 GDPD3Q7L5L3 318 aa4.03□□□□□ -1.76
GABPB1-204ENST00000396464 OR2V1Q8NHB1 315 aa4.03□□□□□ -1.76
GABPB1-204ENST00000396464 ZNF599Q96NL3 588 aa4.03□□□□□ -1.76
GABPB1-204ENST00000396464 SLC19A3Q9BZV2 496 aa4.03□□□□□ -1.76
GABPB1-204ENST00000396464 RBM38Q9H0Z9 239 aaKnown RBP4.03□□□□□ -1.76
GABPB1-204ENST00000396464 WDR13Q9H1Z4 485 aa4.03□□□□□ -1.76
GABPB1-204ENST00000396464 IL25Q9H293 177 aa4.03□□□□□ -1.76
GABPB1-204ENST00000396464 LHX5Q9H2C1 402 aa4.03□□□□□ -1.76
GABPB1-204ENST00000396464 SIX2Q9NPC8 291 aa4.03□□□□□ -1.76
GABPB1-204ENST00000396464 EXD2Q9NVH0 621 aa4.03□□□□□ -1.76
GABPB1-204ENST00000396464 MGAT4AQ9UM21 535 aa4.03□□□□□ -1.76
GABPB1-204ENST00000396464 FARSAQ9Y285 508 aaKnown RBP4.03□□□□□ -1.76
GABPB1-204ENST00000396464 ASF1AQ9Y294 204 aa4.03□□□□□ -1.76
GABPB1-204ENST00000396464 ARL2BPQ9Y2Y0 163 aa4.03□□□□□ -1.76
GABPB1-204ENST00000396464 DISP1Q96F81 1524 aa4.02□□□□□ -1.77
GABPB1-204ENST00000396464 LRRIQ1Q96JM4 1722 aa4.02□□□□□ -1.77
GABPB1-204ENST00000396464 TIAM1Q13009 1591 aa4.02□□□□□ -1.77
GABPB1-204ENST00000396464 ITSN2Q9NZM3 1697 aa4.02□□□□□ -1.77
GABPB1-204ENST00000396464 IGKV1D-8A0A087WSZ0 117 aa4.02□□□□□ -1.77
GABPB1-204ENST00000396464 B4DXG7 233 aa4.02□□□□□ -1.77
GABPB1-204ENST00000396464 NUPL2O15504 423 aaKnown RBP4.02□□□□□ -1.77
GABPB1-204ENST00000396464 EIF3GO75821 320 aaKnown RBP eCLIP4.02□□□□□ -1.77
GABPB1-204ENST00000396464 CTDNEP1O95476 244 aa4.02□□□□□ -1.77
GABPB1-204ENST00000396464 CD5P06127 495 aa4.02□□□□□ -1.77
GABPB1-204ENST00000396464 ZNF12P17014 697 aa4.02□□□□□ -1.77
GABPB1-204ENST00000396464 TCP1P17987 556 aaKnown RBP4.02□□□□□ -1.77
GABPB1-204ENST00000396464 RAB5AP20339 215 aa4.02□□□□□ -1.77
GABPB1-204ENST00000396464 SHC1P29353 583 aa4.02□□□□□ -1.77
GABPB1-204ENST00000396464 NTSP30990 170 aa4.02□□□□□ -1.77
GABPB1-204ENST00000396464 TIMP3P35625 211 aa4.02□□□□□ -1.77
GABPB1-204ENST00000396464 EFNA3P52797 238 aa4.02□□□□□ -1.77
GABPB1-204ENST00000396464 DLX6P56179 175 aa4.02□□□□□ -1.77
GABPB1-204ENST00000396464 SPCS3P61009 180 aa4.02□□□□□ -1.77
GABPB1-204ENST00000396464 PARP15Q460N3 678 aa4.02□□□□□ -1.77
GABPB1-204ENST00000396464 ZNF790Q6PG37 636 aa4.02□□□□□ -1.77
GABPB1-204ENST00000396464 SLC51BQ86UW2 128 aa4.02□□□□□ -1.77
GABPB1-204ENST00000396464 PXT1Q8NFP0 134 aa4.02□□□□□ -1.77
GABPB1-204ENST00000396464 OR1M1Q8NGA1 313 aa4.02□□□□□ -1.77
GABPB1-204ENST00000396464 ANKRD9Q96BM1 317 aaPredicted RBP4.02□□□□□ -1.77
GABPB1-204ENST00000396464 SLC25A38Q96DW6 304 aa4.02□□□□□ -1.77
GABPB1-204ENST00000396464 MED8Q96G25 268 aa4.02□□□□□ -1.77
GABPB1-204ENST00000396464 ST6GAL2Q96JF0 529 aa4.02□□□□□ -1.77
GABPB1-204ENST00000396464 Q96MT0 163 aa4.02□□□□□ -1.77
GABPB1-204ENST00000396464 RBP7Q96R05 134 aa4.02□□□□□ -1.77
GABPB1-204ENST00000396464 TEAD3Q99594 435 aa4.02□□□□□ -1.77
GABPB1-204ENST00000396464 GPR21Q99679 349 aa4.02□□□□□ -1.77
GABPB1-204ENST00000396464 HOPXQ9BPY8 73 aaPredicted RBP4.02□□□□□ -1.77
GABPB1-204ENST00000396464 C20orf144Q9BQM9 153 aa4.02□□□□□ -1.77
GABPB1-204ENST00000396464 OSBPL11Q9BXB4 747 aa4.02□□□□□ -1.77
GABPB1-204ENST00000396464 NMUR2Q9GZQ4 415 aa4.02□□□□□ -1.77
GABPB1-204ENST00000396464 HOXD1Q9GZZ0 328 aa4.02□□□□□ -1.77
GABPB1-204ENST00000396464 ZNF442Q9H7R0 627 aa4.02□□□□□ -1.77
GABPB1-204ENST00000396464 EBF2Q9HAK2 575 aa4.02□□□□□ -1.77
GABPB1-204ENST00000396464 DEPPQ9NTK1 212 aa4.02□□□□□ -1.77
GABPB1-204ENST00000396464 ARL5AQ9Y689 179 aa4.02□□□□□ -1.77
GABPB1-204ENST00000396464 CDK13Q14004 1512 aaKnown RBP4.02□□□□□ -1.77
GABPB1-204ENST00000396464 ABCC2Q92887 1545 aa4.02□□□□□ -1.77
GABPB1-204ENST00000396464 MTUS2Q5JR59 1369 aa4.02□□□□□ -1.77
GABPB1-204ENST00000396464 CASKIN1Q8WXD9 1431 aa4.01□□□□□ -1.77
GABPB1-204ENST00000396464 EHBP1L1Q8N3D4 1523 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms