RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 OR2B11Q5JQS5 317 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 CLEC12AQ5QGZ9 265 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 LY6G6FQ5SQ64 297 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 C10orf128Q5T292 105 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 ARHGAP40Q5TG30 622 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 NKAIN2Q5VXU1 208 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 FAAP20Q6NZ36 180 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 IGFL2Q6UWQ7 119 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 MEX3DQ86XN8 651 aaKnown RBP4.77□□□□□ -1.65
VPS41-203ENST00000395969 C15orf54Q8N8G6 183 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 OR5J2Q8NH18 312 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 ZNF524Q96C55 264 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 SAMD8Q96LT4 415 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 C1orf198Q9H425 327 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 CCDC86Q9H6F5 360 aaKnown RBP4.77□□□□□ -1.65
VPS41-203ENST00000395969 SOHLH2Q9NX45 425 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 TNFSF18Q9UNG2 199 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 TMEM14AQ9Y6G1 99 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 SCN3AQ9NY46 2000 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 C9orf170A2RU37 121 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 CXorf65A6NEN9 183 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 DBX1A6NMT0 343 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 CDX4O14627 284 aaPredicted RBP4.77□□□□□ -1.65
VPS41-203ENST00000395969 PPIHO43447 177 aaKnown RBP4.77□□□□□ -1.65
VPS41-203ENST00000395969 CLN5O75503 358 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 SLC2A10O95528 541 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 CH25HO95992 272 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 RCC1P18754 421 aaPredicted RBP4.77□□□□□ -1.65
VPS41-203ENST00000395969 EIF2S3P41091 472 aaKnown RBP4.77□□□□□ -1.65
VPS41-203ENST00000395969 POU3F4P49335 361 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 SRSF3P84103 164 aaKnown RBP4.77□□□□□ -1.65
VPS41-203ENST00000395969 ATXN7L3Q14CW9 347 aaPredicted RBP4.77□□□□□ -1.65
VPS41-203ENST00000395969 FAM166AQ6J272 317 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 BEND4Q6ZU67 534 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 TTLL10Q6ZVT0 673 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 ZNF546Q86UE3 836 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 NAA40Q86UY6 237 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 SHISA5Q8N114 240 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 TSLPQ969D9 159 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 TMEM54Q969K7 222 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 TMEM45BQ96B21 275 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 SPACA9Q96E40 222 aaPredicted RBP4.77□□□□□ -1.65
VPS41-203ENST00000395969 GFI1Q99684 422 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 ATG101Q9BSB4 218 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 ALX4Q9H161 411 aaPredicted RBP4.77□□□□□ -1.65
VPS41-203ENST00000395969 STARD5Q9NSY2 213 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 TREM2Q9NZC2 230 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 DNAJB11Q9UBS4 358 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 FOXJ3Q9UPW0 622 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 PLEKHA6Q9Y2H5 1048 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 RHBDD3Q9Y3P4 386 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 WIF1Q9Y5W5 379 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 CACNA1EQ15878 2313 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 MYO7AQ13402 2215 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 KANTRA0A1W2PQU2 76 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 DAPL1A0PJW8 107 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 RNF222A6NCQ9 220 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 ARGFXA6NJG6 315 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 LIPT2A6NK58 231 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 ZNF705EA8MWA4 302 aaPredicted RBP4.77□□□□□ -1.65
VPS41-203ENST00000395969 CDRT15L2A8MXV6 281 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 BLOC1S5-TXNDC5H3BN57 136 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 SMPD2O60906 423 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 UPK3AO75631 287 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 FARS2O95363 451 aaKnown RBP4.77□□□□□ -1.65
VPS41-203ENST00000395969 TIAF1O95411 115 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 CSTBP04080 98 aaKnown RBP4.77□□□□□ -1.65
VPS41-203ENST00000395969 LUMP51884 338 aaPredicted RBP4.77□□□□□ -1.65
VPS41-203ENST00000395969 SSBP1Q04837 148 aaKnown RBP4.77□□□□□ -1.65
VPS41-203ENST00000395969 RELQ04864 619 aaPredicted RBP4.77□□□□□ -1.65
VPS41-203ENST00000395969 PEA15Q15121 130 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 DEFB110Q30KQ9 67 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 PDZD11Q5EBL8 140 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 CDPF1Q6NVV7 123 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 FIGNL1Q6PIW4 674 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 OPN5Q6U736 354 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 ZNF321PQ8N8H1 164 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 WDSUB1Q8N9V3 476 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 OR4A4PQ8NGN8 299 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 OR13C5Q8NGS8 318 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 OR13C2Q8NGS9 318 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 OR6N1Q8NGY5 312 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 POC1BQ8TC44 478 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 GRHL3Q8TE85 626 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 KCNE4Q8WWG9 221 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 ASB10Q8WXI3 467 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 GHSRQ92847 366 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 C8orf44Q96CB5 159 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 LURAP1Q96LR2 239 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 ZNF75AQ96N20 296 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 CNN2Q99439 309 aaKnown RBP4.77□□□□□ -1.65
VPS41-203ENST00000395969 LPAR4Q99677 370 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 LRFN3Q9BTN0 628 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 EDEM2Q9BV94 578 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 RTN4RQ9BZR6 473 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 FAM212BQ9NTI7 297 aaPredicted RBP4.77□□□□□ -1.65
VPS41-203ENST00000395969 UFSP2Q9NUQ7 469 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 PPP1R14DQ9NXH3 145 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 TAS2R10Q9NYW0 307 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 LAMA2P24043 3122 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms