RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 CST2P09228 141 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 GNG3P63215 75 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 MSMO1Q15800 293 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 STEAP1BQ6NZ63 245 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 OR8H1Q8NGG4 311 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 CAPSLQ8WWF8 208 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 HAS2Q92819 552 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 PTP4A1Q93096 173 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 SEH1LQ96EE3 360 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 KTI12Q96EK9 354 aaPredicted RBP3.03□□□□□ -1.92
VPS13C-203ENST00000395896 C4orf45Q96LM5 186 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 FOXB1Q99853 325 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 OR51J1Q9H342 316 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 RNF150Q9ULK6 438 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 A6NLC8 198 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 L7N2F9 121 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 TNFRSF10AO00220 468 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 CYB5BO43169 146 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 KLF4O43474 513 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 GALR2O43603 387 aaPredicted RBP3.03□□□□□ -1.92
VPS13C-203ENST00000395896 WDR1O75083 606 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 GCM2O75603 506 aaPredicted RBP3.03□□□□□ -1.92
VPS13C-203ENST00000395896 THBS4P35443 961 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 CRYBB2P43320 205 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 PPIAP62937 165 aaKnown RBP3.03□□□□□ -1.92
VPS13C-203ENST00000395896 FABP5Q01469 135 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 SRYQ05066 204 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 ZFP36L1Q07352 338 aaKnown RBP3.03□□□□□ -1.92
VPS13C-203ENST00000395896 TMEM211Q6ICI0 200 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 IDO2Q6ZQW0 420 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 LINC00696Q6ZRV3 163 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 C8orf44Q96CB5 159 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 GMPPAQ96IJ6 420 aaPredicted RBP3.03□□□□□ -1.92
VPS13C-203ENST00000395896 CHST5Q9GZS9 411 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 GHITMQ9H3K2 345 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 NTN3O00634 580 aaPredicted RBP3.03□□□□□ -1.92
VPS13C-203ENST00000395896 CD79AP11912 226 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 GDNFP39905 211 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 CRYBA2P53672 197 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 CATR1Q13166 79 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 RAB31Q13636 194 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 SMIM21Q3B7S5 101 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 STPG1Q5TH74 334 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 LINC00596Q86U02 117 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 NOXA1Q86UR1 476 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 NARS2Q96I59 477 aaKnown RBP3.03□□□□□ -1.92
VPS13C-203ENST00000395896 CREB3L2Q70SY1 520 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 ADGRG3Q86Y34 549 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 ASCC1Q8N9N2 400 aaKnown RBP3.03□□□□□ -1.92
VPS13C-203ENST00000395896 ALX4Q9H161 411 aaPredicted RBP3.03□□□□□ -1.92
VPS13C-203ENST00000395896 HS3ST3B1Q9Y662 390 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 SPEGQ15772 3267 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 A0A0D9SG52 128 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 A0A1W2PQM1 296 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 BTBD17A6NE02 478 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 FAM25EA8MYX2 175 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 HPGDSO60760 199 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 TGM6O95932 706 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 CLUP10909 449 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 TCEA1P23193 301 aaKnown RBP3.03□□□□□ -1.92
VPS13C-203ENST00000395896 SLC6A1P30531 599 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 VAMP2P63027 116 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 TMEM108Q6UXF1 575 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 RFPL4BQ6ZWI9 263 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 ELMOD2Q8IZ81 293 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 MOGAT1Q96PD6 335 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 GPR84Q9NQS5 396 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 DNAJB11Q9UBS4 358 aa3.03□□□□□ -1.92
VPS13C-203ENST00000395896 ZNF223Q9UK11 482 aaPredicted RBP3.03□□□□□ -1.92
VPS13C-203ENST00000395896 A0A1B0GUH1 482 aa3.03□□□□□ -1.93
VPS13C-203ENST00000395896 M0R129 80 aa3.03□□□□□ -1.93
VPS13C-203ENST00000395896 OGG1O15527 345 aa3.03□□□□□ -1.93
VPS13C-203ENST00000395896 IGHMP01871 453 aa3.03□□□□□ -1.93
VPS13C-203ENST00000395896 CTLA4P16410 223 aa3.03□□□□□ -1.93
VPS13C-203ENST00000395896 CNR1P21554 472 aa3.03□□□□□ -1.93
VPS13C-203ENST00000395896 PPP1CAP62136 330 aa3.03□□□□□ -1.93
VPS13C-203ENST00000395896 HBG1P69891 147 aa3.03□□□□□ -1.93
VPS13C-203ENST00000395896 HBG2P69892 147 aa3.03□□□□□ -1.93
VPS13C-203ENST00000395896 RPP30P78346 268 aaKnown RBP3.03□□□□□ -1.93
VPS13C-203ENST00000395896 PEAR1Q5VY43 1037 aaPredicted RBP3.03□□□□□ -1.93
VPS13C-203ENST00000395896 LINC00114Q6XXX2 140 aa3.03□□□□□ -1.93
VPS13C-203ENST00000395896 BTN2A1Q7KYR7 527 aa3.03□□□□□ -1.93
VPS13C-203ENST00000395896 ZNF709Q8N972 641 aa3.03□□□□□ -1.93
VPS13C-203ENST00000395896 OR51D1Q8NGF3 324 aa3.03□□□□□ -1.93
VPS13C-203ENST00000395896 FNDC9Q8TBE3 224 aa3.03□□□□□ -1.93
VPS13C-203ENST00000395896 NUDT8Q8WV74 236 aa3.03□□□□□ -1.93
VPS13C-203ENST00000395896 TCRBP04435 133 aa3.03□□□□□ -1.93
VPS13C-203ENST00000395896 GLAP06280 429 aa3.03□□□□□ -1.93
VPS13C-203ENST00000395896 COX5BP10606 129 aa3.03□□□□□ -1.93
VPS13C-203ENST00000395896 MPGP29372 298 aa3.03□□□□□ -1.93
VPS13C-203ENST00000395896 ZNF81P51508 661 aa3.03□□□□□ -1.93
VPS13C-203ENST00000395896 AGFG1P52594 562 aaKnown RBP3.03□□□□□ -1.93
VPS13C-203ENST00000395896 ZNF718Q3SXZ3 478 aa3.03□□□□□ -1.93
VPS13C-203ENST00000395896 SLC25A53Q5H9E4 307 aa3.03□□□□□ -1.93
VPS13C-203ENST00000395896 ZNF766Q5HY98 468 aa3.03□□□□□ -1.93
VPS13C-203ENST00000395896 ELFN2Q5R3F8 820 aa3.03□□□□□ -1.93
VPS13C-203ENST00000395896 CARD17Q5XLA6 110 aa3.03□□□□□ -1.93
VPS13C-203ENST00000395896 FAM122BQ7Z309 247 aa3.03□□□□□ -1.93
VPS13C-203ENST00000395896 FAM71F1Q96KD3 344 aaPredicted RBP3.03□□□□□ -1.93
VPS13C-203ENST00000395896 SLC22A13Q9Y226 551 aa3.03□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms