RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 A0A1W2PRM7 423 aa11.08□□□□□ -0.64
VCPKMT-201ENST00000395859 NPIPB13A6NJU9 1138 aa11.08□□□□□ -0.64
VCPKMT-201ENST00000395859 NPIPB4C9JG80 1138 aa11.08□□□□□ -0.64
VCPKMT-201ENST00000395859 CHP2O43745 196 aa11.08□□□□□ -0.64
VCPKMT-201ENST00000395859 PAHP00439 452 aa11.08□□□□□ -0.64
VCPKMT-201ENST00000395859 HLA-DPB1P04440 258 aa11.08□□□□□ -0.64
VCPKMT-201ENST00000395859 HSD17B1P14061 328 aa11.08□□□□□ -0.64
VCPKMT-201ENST00000395859 EEF1B2P24534 225 aaKnown RBP11.08□□□□□ -0.64
VCPKMT-201ENST00000395859 UBE2E1P51965 193 aa11.08□□□□□ -0.64
VCPKMT-201ENST00000395859 PSME3P61289 254 aa11.08□□□□□ -0.64
VCPKMT-201ENST00000395859 RPL18Q07020 188 aaKnown RBP11.08□□□□□ -0.64
VCPKMT-201ENST00000395859 ACSM1Q08AH1 577 aa11.08□□□□□ -0.64
VCPKMT-201ENST00000395859 FADDQ13158 208 aa11.08□□□□□ -0.64
VCPKMT-201ENST00000395859 KCNJ8Q15842 424 aa11.08□□□□□ -0.64
VCPKMT-201ENST00000395859 C6orf10Q5SRN2 563 aa11.08□□□□□ -0.64
VCPKMT-201ENST00000395859 SFRP4Q6FHJ7 346 aaPredicted RBP11.08□□□□□ -0.64
VCPKMT-201ENST00000395859 ZFP1Q6P2D0 407 aa11.08□□□□□ -0.64
VCPKMT-201ENST00000395859 RANBP3LQ86VV4 465 aaPredicted RBP11.08□□□□□ -0.64
VCPKMT-201ENST00000395859 OR8J3Q8NGG0 315 aa11.08□□□□□ -0.64
VCPKMT-201ENST00000395859 NSMAFQ92636 917 aa11.08□□□□□ -0.64
VCPKMT-201ENST00000395859 RORBQ92753 470 aa11.08□□□□□ -0.64
VCPKMT-201ENST00000395859 ASB9Q96DX5 294 aa11.08□□□□□ -0.64
VCPKMT-201ENST00000395859 ZNF582Q96NG8 517 aaPredicted RBP11.08□□□□□ -0.64
VCPKMT-201ENST00000395859 SELENONQ9NZV5 590 aa11.08□□□□□ -0.64
VCPKMT-201ENST00000395859 KIAA1109Q2LD37 5005 aa11.07□□□□□ -0.64
VCPKMT-201ENST00000395859 ELOVL7A1L3X0 281 aa11.07□□□□□ -0.64
VCPKMT-201ENST00000395859 FBP2O00757 339 aa11.07□□□□□ -0.64
VCPKMT-201ENST00000395859 FMO6PO60774 539 aa11.07□□□□□ -0.64
VCPKMT-201ENST00000395859 ATP6V1G2O95670 118 aa11.07□□□□□ -0.64
VCPKMT-201ENST00000395859 IRF2P14316 349 aa11.07□□□□□ -0.64
VCPKMT-201ENST00000395859 PPIBP23284 216 aaKnown RBP11.07□□□□□ -0.64
VCPKMT-201ENST00000395859 LMO1P25800 156 aa11.07□□□□□ -0.64
VCPKMT-201ENST00000395859 TRIM25Q14258 630 aaKnown RBP11.07□□□□□ -0.64
VCPKMT-201ENST00000395859 RGNQ15493 299 aa11.07□□□□□ -0.64
VCPKMT-201ENST00000395859 TCTEX1D4Q5JR98 221 aa11.07□□□□□ -0.64
VCPKMT-201ENST00000395859 C1orf146Q5VVC0 180 aa11.07□□□□□ -0.64
VCPKMT-201ENST00000395859 HCP5Q6MZN7 132 aa11.07□□□□□ -0.64
VCPKMT-201ENST00000395859 ZNF613Q6PF04 617 aa11.07□□□□□ -0.64
VCPKMT-201ENST00000395859 LIAT1Q6ZQX7 453 aa11.07□□□□□ -0.64
VCPKMT-201ENST00000395859 HDDC2Q7Z4H3 204 aa11.07□□□□□ -0.64
VCPKMT-201ENST00000395859 TSPYL5Q86VY4 417 aaPredicted RBP11.07□□□□□ -0.64
VCPKMT-201ENST00000395859 CLDN22Q8N7P3 220 aa11.07□□□□□ -0.64
VCPKMT-201ENST00000395859 LINC00482Q8N8I6 264 aa11.07□□□□□ -0.64
VCPKMT-201ENST00000395859 OR11L1Q8NGX0 322 aa11.07□□□□□ -0.64
VCPKMT-201ENST00000395859 SLC7A6Q92536 515 aa11.07□□□□□ -0.64
VCPKMT-201ENST00000395859 GTF2H4Q92759 462 aa11.07□□□□□ -0.64
VCPKMT-201ENST00000395859 ECSITQ9BQ95 431 aa11.07□□□□□ -0.64
VCPKMT-201ENST00000395859 WACQ9BTA9 647 aa11.07□□□□□ -0.64
VCPKMT-201ENST00000395859 FAM234AQ9H0X4 552 aa11.07□□□□□ -0.64
VCPKMT-201ENST00000395859 RNF7Q9UBF6 113 aa11.07□□□□□ -0.64
VCPKMT-201ENST00000395859 A0A1W2PRG6 482 aa11.06□□□□□ -0.64
VCPKMT-201ENST00000395859 OR6C6A6NF89 314 aa11.06□□□□□ -0.64
VCPKMT-201ENST00000395859 OOEPA6NGQ2 149 aa11.06□□□□□ -0.64
VCPKMT-201ENST00000395859 C5orf58C9J3I9 102 aa11.06□□□□□ -0.64
VCPKMT-201ENST00000395859 CLIC1O00299 241 aa11.06□□□□□ -0.64
VCPKMT-201ENST00000395859 HOXB9P17482 250 aaPredicted RBP11.06□□□□□ -0.64
VCPKMT-201ENST00000395859 DAP3P51398 398 aaKnown RBP11.06□□□□□ -0.64
VCPKMT-201ENST00000395859 RGS8P57771 180 aaPredicted RBP11.06□□□□□ -0.64
VCPKMT-201ENST00000395859 LRRC75BQ2VPJ9 315 aa11.06□□□□□ -0.64
VCPKMT-201ENST00000395859 LRIF1Q5T3J3 769 aa11.06□□□□□ -0.64
VCPKMT-201ENST00000395859 PRAMEF6Q5VXH4 476 aa11.06□□□□□ -0.64
VCPKMT-201ENST00000395859 FAM90A1Q86YD7 464 aa11.06□□□□□ -0.64
VCPKMT-201ENST00000395859 OR9I1Q8NGQ6 314 aa11.06□□□□□ -0.64
VCPKMT-201ENST00000395859 C8orf46Q8TAG6 207 aa11.06□□□□□ -0.64
VCPKMT-201ENST00000395859 RASD2Q96D21 266 aa11.06□□□□□ -0.64
VCPKMT-201ENST00000395859 CDRT15Q96T59 188 aa11.06□□□□□ -0.64
VCPKMT-201ENST00000395859 RNPEPL1Q9HAU8 725 aa11.06□□□□□ -0.64
VCPKMT-201ENST00000395859 MEPEQ9NQ76 525 aaPredicted RBP11.06□□□□□ -0.64
VCPKMT-201ENST00000395859 ONECUT1Q9UBC0 465 aa11.06□□□□□ -0.64
VCPKMT-201ENST00000395859 CORO2BQ9UQ03 480 aa11.06□□□□□ -0.64
VCPKMT-201ENST00000395859 POMPQ9Y244 141 aa11.06□□□□□ -0.64
VCPKMT-201ENST00000395859 TRAV38-1A0A0B4J264 116 aa11.05□□□□□ -0.64
VCPKMT-201ENST00000395859 A0A1B0GW55 424 aa11.05□□□□□ -0.64
VCPKMT-201ENST00000395859 MCIDASD6RGH6 385 aa11.05□□□□□ -0.64
VCPKMT-201ENST00000395859 BLOC1S5-TXNDC5H3BN57 136 aa11.05□□□□□ -0.64
VCPKMT-201ENST00000395859 DOK2O60496 412 aa11.05□□□□□ -0.64
VCPKMT-201ENST00000395859 GYPAP02724 150 aa11.05□□□□□ -0.64
VCPKMT-201ENST00000395859 DUX4L2P0CJ85 424 aa11.05□□□□□ -0.64
VCPKMT-201ENST00000395859 DUX4L3P0CJ86 424 aa11.05□□□□□ -0.64
VCPKMT-201ENST00000395859 DUX4L4P0CJ87 422 aa11.05□□□□□ -0.64
VCPKMT-201ENST00000395859 DUX4L5P0CJ88 424 aa11.05□□□□□ -0.64
VCPKMT-201ENST00000395859 DUX4L6P0CJ89 424 aa11.05□□□□□ -0.64
VCPKMT-201ENST00000395859 DUX4L7P0CJ90 424 aa11.05□□□□□ -0.64
VCPKMT-201ENST00000395859 PF4V1P10720 104 aa11.05□□□□□ -0.64
VCPKMT-201ENST00000395859 LYL1P12980 280 aa11.05□□□□□ -0.64
VCPKMT-201ENST00000395859 FPR3P25089 353 aa11.05□□□□□ -0.64
VCPKMT-201ENST00000395859 HTR5AP47898 357 aa11.05□□□□□ -0.64
VCPKMT-201ENST00000395859 RGS6P49758 472 aa11.05□□□□□ -0.64
VCPKMT-201ENST00000395859 NFYCQ13952 458 aa11.05□□□□□ -0.64
VCPKMT-201ENST00000395859 NPTX1Q15818 432 aa11.05□□□□□ -0.64
VCPKMT-201ENST00000395859 TEX36Q5VZQ5 186 aa11.05□□□□□ -0.64
VCPKMT-201ENST00000395859 DUX4L9Q6RFH8 374 aaPredicted RBP11.05□□□□□ -0.64
VCPKMT-201ENST00000395859 NANOGNBQ7Z5D8 188 aa11.05□□□□□ -0.64
VCPKMT-201ENST00000395859 SLC30A8Q8IWU4 369 aa11.05□□□□□ -0.64
VCPKMT-201ENST00000395859 SDR9C7Q8NEX9 313 aa11.05□□□□□ -0.64
VCPKMT-201ENST00000395859 DUS3LQ96G46 650 aaKnown RBP11.05□□□□□ -0.64
VCPKMT-201ENST00000395859 ALG12Q9BV10 488 aa11.05□□□□□ -0.64
VCPKMT-201ENST00000395859 SPATA5L1Q9BVQ7 753 aa11.05□□□□□ -0.64
VCPKMT-201ENST00000395859 CDCA4Q9BXL8 241 aa11.05□□□□□ -0.64
VCPKMT-201ENST00000395859 PAIP1Q9H074 479 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms