RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 MRPL21Q7Z2W9 205 aaKnown RBP17.46■□□□□ 0.39
TRAF4-203ENST00000394925 CYP4Z1Q86W10 505 aa17.46■□□□□ 0.39
TRAF4-203ENST00000394925 GSTA4O15217 222 aa17.45■□□□□ 0.38
TRAF4-203ENST00000394925 GYPAP02724 150 aa17.45■□□□□ 0.38
TRAF4-203ENST00000394925 OMPP47874 163 aa17.45■□□□□ 0.38
TRAF4-203ENST00000394925 TRAP1Q12931 704 aaKnown RBP17.45■□□□□ 0.38
TRAF4-203ENST00000394925 FGD3Q5JSP0 725 aa17.45■□□□□ 0.38
TRAF4-203ENST00000394925 Q6ZSV7 163 aa17.45■□□□□ 0.38
TRAF4-203ENST00000394925 TSEN54Q7Z6J9 526 aaKnown RBP17.45■□□□□ 0.38
TRAF4-203ENST00000394925 LDLRAD3Q86YD5 345 aa17.45■□□□□ 0.38
TRAF4-203ENST00000394925 OR6V1Q8N148 313 aa17.45■□□□□ 0.38
TRAF4-203ENST00000394925 SLC26A10Q8NG04 563 aa17.45■□□□□ 0.38
TRAF4-203ENST00000394925 ERMAPQ96PL5 475 aaPredicted RBP17.45■□□□□ 0.38
TRAF4-203ENST00000394925 ATF6BQ99941 703 aa17.45■□□□□ 0.38
TRAF4-203ENST00000394925 ADAT1Q9BUB4 502 aaKnown RBP17.45■□□□□ 0.38
TRAF4-203ENST00000394925 AURKCQ9UQB9 309 aa17.45■□□□□ 0.38
TRAF4-203ENST00000394925 ENPP4Q9Y6X5 453 aa17.45■□□□□ 0.38
TRAF4-203ENST00000394925 TRAV38-1A0A0B4J264 116 aa17.44■□□□□ 0.38
TRAF4-203ENST00000394925 OOEPA6NGQ2 149 aa17.44■□□□□ 0.38
TRAF4-203ENST00000394925 UNC119BA6NIH7 251 aa17.44■□□□□ 0.38
TRAF4-203ENST00000394925 HMGB1P1B2RPK0 211 aaPredicted RBP17.44■□□□□ 0.38
TRAF4-203ENST00000394925 NDUFA2O43678 99 aa17.44■□□□□ 0.38
TRAF4-203ENST00000394925 PPP1R3DO95685 299 aa17.44■□□□□ 0.38
TRAF4-203ENST00000394925 SERPINA1P01009 418 aa17.44■□□□□ 0.38
TRAF4-203ENST00000394925 H1F0P07305 194 aaKnown RBP17.44■□□□□ 0.38
TRAF4-203ENST00000394925 LIPEQ05469 1076 aa17.44■□□□□ 0.38
TRAF4-203ENST00000394925 ECH1Q13011 328 aa17.44■□□□□ 0.38
TRAF4-203ENST00000394925 BTN2A1Q7KYR7 527 aa17.44■□□□□ 0.38
TRAF4-203ENST00000394925 SLC15A3Q8IY34 581 aa17.44■□□□□ 0.38
TRAF4-203ENST00000394925 ZSCAN4Q8NAM6 433 aaPredicted RBP17.44■□□□□ 0.38
TRAF4-203ENST00000394925 OR2AJ1Q8NGZ0 328 aa17.44■□□□□ 0.38
TRAF4-203ENST00000394925 RCN3Q96D15 328 aa17.44■□□□□ 0.38
TRAF4-203ENST00000394925 NMNAT3Q96T66 252 aa17.44■□□□□ 0.38
TRAF4-203ENST00000394925 SLC22A4Q9H015 551 aa17.44■□□□□ 0.38
TRAF4-203ENST00000394925 TRIM36Q9NQ86 728 aa17.44■□□□□ 0.38
TRAF4-203ENST00000394925 C1orf123Q9NWV4 160 aa17.44■□□□□ 0.38
TRAF4-203ENST00000394925 NOP16Q9Y3C1 178 aaKnown RBP17.44■□□□□ 0.38
TRAF4-203ENST00000394925 A0A1W2PRQ8 180 aa17.43■□□□□ 0.38
TRAF4-203ENST00000394925 CD300LBA8K4G0 201 aa17.43■□□□□ 0.38
TRAF4-203ENST00000394925 OR10H3O60404 316 aa17.43■□□□□ 0.38
TRAF4-203ENST00000394925 FCN3O75636 299 aa17.43■□□□□ 0.38
TRAF4-203ENST00000394925 GGT2P36268 569 aa17.43■□□□□ 0.38
TRAF4-203ENST00000394925 TPTEP56180 551 aa17.43■□□□□ 0.38
TRAF4-203ENST00000394925 POU4F2Q12837 409 aa17.43■□□□□ 0.38
TRAF4-203ENST00000394925 DGCR6Q14129 220 aa17.43■□□□□ 0.38
TRAF4-203ENST00000394925 SLC36A3Q495N2 470 aa17.43■□□□□ 0.38
TRAF4-203ENST00000394925 GDPGP1Q6ZNW5 385 aa17.43■□□□□ 0.38
TRAF4-203ENST00000394925 ZNF826PQ6ZT77 177 aa17.43■□□□□ 0.38
TRAF4-203ENST00000394925 PIP4P2Q8N4L2 257 aa17.43■□□□□ 0.38
TRAF4-203ENST00000394925 DPAGT1Q9H3H5 408 aa17.43■□□□□ 0.38
TRAF4-203ENST00000394925 PNRC2Q9NPJ4 139 aaKnown RBP17.43■□□□□ 0.38
TRAF4-203ENST00000394925 AP3M1Q9Y2T2 418 aa17.43■□□□□ 0.38
TRAF4-203ENST00000394925 FAM96BQ9Y3D0 163 aa17.43■□□□□ 0.38
TRAF4-203ENST00000394925 DVL1O14640 695 aa17.42■□□□□ 0.38
TRAF4-203ENST00000394925 GMDSO60547 372 aa17.42■□□□□ 0.38
TRAF4-203ENST00000394925 PTBP3O95758 552 aaKnown RBP17.42■□□□□ 0.38
TRAF4-203ENST00000394925 RENP00797 406 aa17.42■□□□□ 0.38
TRAF4-203ENST00000394925 GRPP07492 148 aa17.42■□□□□ 0.38
TRAF4-203ENST00000394925 SEC23BQ15437 767 aa17.42■□□□□ 0.38
TRAF4-203ENST00000394925 SMARCD3Q6STE5 483 aa17.42■□□□□ 0.38
TRAF4-203ENST00000394925 PLPP7Q8NBV4 271 aa17.42■□□□□ 0.38
TRAF4-203ENST00000394925 ST8SIA4Q92187 359 aa17.42■□□□□ 0.38
TRAF4-203ENST00000394925 RPRD1BQ9NQG5 326 aaKnown RBP17.42■□□□□ 0.38
TRAF4-203ENST00000394925 CYB5R1Q9UHQ9 305 aa17.42■□□□□ 0.38
TRAF4-203ENST00000394925 FAM32AQ9Y421 112 aaKnown RBP17.42■□□□□ 0.38
TRAF4-203ENST00000394925 TRBV4-1A0A0J9YWV2 114 aa17.41■□□□□ 0.38
TRAF4-203ENST00000394925 GGT3PA6NGU5 568 aa17.41■□□□□ 0.38
TRAF4-203ENST00000394925 A6NLC8 198 aa17.41■□□□□ 0.38
TRAF4-203ENST00000394925 M0R135 149 aa17.41■□□□□ 0.38
TRAF4-203ENST00000394925 HLA-DQA2P01906 255 aa17.41■□□□□ 0.38
TRAF4-203ENST00000394925 TROVE2P10155 538 aaKnown RBP eCLIP17.41■□□□□ 0.38
TRAF4-203ENST00000394925 ZNF92Q03936 586 aa17.41■□□□□ 0.38
TRAF4-203ENST00000394925 C2orf68Q2NKX9 166 aa17.41■□□□□ 0.38
TRAF4-203ENST00000394925 SNAI3Q3KNW1 292 aa17.41■□□□□ 0.38
TRAF4-203ENST00000394925 DHRS7BQ6IAN0 325 aaPredicted RBP17.41■□□□□ 0.38
TRAF4-203ENST00000394925 VMO1Q7Z5L0 202 aa17.41■□□□□ 0.38
TRAF4-203ENST00000394925 ARPINQ7Z6K5 226 aa17.41■□□□□ 0.38
TRAF4-203ENST00000394925 FAM90A1Q86YD7 464 aa17.41■□□□□ 0.38
TRAF4-203ENST00000394925 GCSAMQ8N6F7 178 aa17.41■□□□□ 0.38
TRAF4-203ENST00000394925 OR4K13Q8NH42 304 aa17.41■□□□□ 0.38
TRAF4-203ENST00000394925 OR2AE1Q8NHA4 323 aa17.41■□□□□ 0.38
TRAF4-203ENST00000394925 LRTOMTQ8WZ04 291 aa17.41■□□□□ 0.38
TRAF4-203ENST00000394925 FAM162AQ96A26 154 aa17.41■□□□□ 0.38
TRAF4-203ENST00000394925 ZNF799Q96GE5 643 aa17.41■□□□□ 0.38
TRAF4-203ENST00000394925 SEMA6AQ9H2E6 1030 aa17.41■□□□□ 0.38
TRAF4-203ENST00000394925 C16orf95Q9H693 158 aa17.41■□□□□ 0.38
TRAF4-203ENST00000394925 CNTD2Q9H8S5 307 aa17.41■□□□□ 0.38
TRAF4-203ENST00000394925 CAPN7Q9Y6W3 813 aa17.41■□□□□ 0.38
TRAF4-203ENST00000394925 IGHV3OR15-7A0A075B7D8 119 aa17.4■□□□□ 0.38
TRAF4-203ENST00000394925 hCG_1807616A0A1W2PRN6 198 aa17.4■□□□□ 0.38
TRAF4-203ENST00000394925 ECDO95905 644 aaPredicted RBP17.4■□□□□ 0.38
TRAF4-203ENST00000394925 NCK1P16333 377 aa17.4■□□□□ 0.38
TRAF4-203ENST00000394925 HIST1H1CP16403 213 aaKnown RBP17.4■□□□□ 0.38
TRAF4-203ENST00000394925 RFX4Q33E94 735 aa17.4■□□□□ 0.38
TRAF4-203ENST00000394925 CDONQ4KMG0 1287 aa17.4■□□□□ 0.38
TRAF4-203ENST00000394925 FGFRL1Q8N441 504 aa17.4■□□□□ 0.38
TRAF4-203ENST00000394925 OR52J3Q8NH60 311 aa17.4■□□□□ 0.38
TRAF4-203ENST00000394925 FANK1Q8TC84 345 aa17.4■□□□□ 0.38
TRAF4-203ENST00000394925 MAP6Q96JE9 813 aa17.4■□□□□ 0.38
TRAF4-203ENST00000394925 FN3KQ9H479 309 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms