RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 GRPEL2Q8TAA5 225 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 GINS4Q9BRT9 223 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 ZPBPQ9BS86 351 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 LRFN3Q9BTN0 628 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 ZFP64Q9NPA5 681 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 TMEM138Q9NPI0 162 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 FREM1Q5H8C1 2179 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 A0A1W2PP11 408 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 FAM172BPA6NC97 362 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 SRSF10O75494 262 aaKnown RBP9.82□□□□□ -0.84
TCOF1-203ENST00000394269 ITGB2P05107 769 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 CYC1P08574 325 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 MAGEA5P43359 124 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 ZNF84P51523 738 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 PCK2Q16822 640 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 GSG1Q2KHT4 349 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 SFRP5Q5T4F7 317 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 RTN4RL2Q86UN3 420 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 VASH2Q86V25 355 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 CLEC1AQ8NC01 280 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 OR11H7Q8NGC8 314 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 OR4C16Q8NGL9 310 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 OR10K1Q8NGX5 313 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 CYYR1Q96J86 154 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 MRI1Q9BV20 369 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 SELENOIQ9C0D9 397 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 OR2B2Q9GZK3 357 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 PCDHGA5Q9Y5G8 931 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 ROS1P08922 2347 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 MEGF11A6BM72 1044 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 NPIPB13A6NJU9 1138 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 LRRC3CA6NJW4 275 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 GJE1A6NN92 205 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 NPIPB4C9JG80 1138 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 CD63P08962 238 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 FAHP16930 419 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 FKBP2P26885 142 aaKnown RBP9.82□□□□□ -0.84
TCOF1-203ENST00000394269 RAC3P60763 192 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 PLA2G2CQ5R387 149 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 Q6ZTK2 550 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 BTN2A1Q7KYR7 527 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 ZIC4Q8N9L1 334 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 GJC3Q8NFK1 279 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 THRSPQ92748 146 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 SORCS2Q96PQ0 1159 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 MICU1Q9BPX6 476 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 SLC6A15Q9H2J7 730 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 CALHM2Q9HA72 323 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 A0A096LPE4 126 aa9.81□□□□□ -0.84
TCOF1-203ENST00000394269 A0A1W2PPZ6 126 aa9.81□□□□□ -0.84
TCOF1-203ENST00000394269 GSTZ1O43708 216 aaPredicted RBP9.81□□□□□ -0.84
TCOF1-203ENST00000394269 VAMP5O95183 116 aa9.81□□□□□ -0.84
TCOF1-203ENST00000394269 GNB3P16520 340 aa9.81□□□□□ -0.84
TCOF1-203ENST00000394269 PSMA6P60900 246 aaKnown RBP9.81□□□□□ -0.84
TCOF1-203ENST00000394269 FAPQ12884 760 aa9.81□□□□□ -0.84
TCOF1-203ENST00000394269 DYRK1AQ13627 763 aa9.81□□□□□ -0.84
TCOF1-203ENST00000394269 NUDCD2Q8WVJ2 157 aa9.81□□□□□ -0.84
TCOF1-203ENST00000394269 NELFAQ9H3P2 528 aa9.81□□□□□ -0.84
TCOF1-203ENST00000394269 ZZEF1O43149 2961 aa9.81□□□□□ -0.84
TCOF1-203ENST00000394269 MYO7BQ6PIF6 2116 aa9.81□□□□□ -0.84
TCOF1-203ENST00000394269 METTL21EPA6NDL7 271 aa9.81□□□□□ -0.84
TCOF1-203ENST00000394269 ZNF774Q6NX45 483 aa9.81□□□□□ -0.84
TCOF1-203ENST00000394269 GLIPR1L1Q6UWM5 242 aa9.81□□□□□ -0.84
TCOF1-203ENST00000394269 ADGRE4PQ86SQ3 457 aa9.81□□□□□ -0.84
TCOF1-203ENST00000394269 SULF2Q8IWU5 870 aa9.81□□□□□ -0.84
TCOF1-203ENST00000394269 BATF2Q8N1L9 274 aa9.81□□□□□ -0.84
TCOF1-203ENST00000394269 GVQW1Q8N7I0 195 aa9.81□□□□□ -0.84
TCOF1-203ENST00000394269 PIGTQ969N2 578 aa9.81□□□□□ -0.84
TCOF1-203ENST00000394269 DEFB127Q9H1M4 99 aa9.81□□□□□ -0.84
TCOF1-203ENST00000394269 SH2D2AQ9NP31 389 aa9.81□□□□□ -0.84
TCOF1-203ENST00000394269 FASNP49327 2511 aaKnown RBP9.81□□□□□ -0.84
TCOF1-203ENST00000394269 ANKRD20A5PA0PJZ0 165 aa9.81□□□□□ -0.84
TCOF1-203ENST00000394269 STMND1H3BQB6 276 aa9.81□□□□□ -0.84
TCOF1-203ENST00000394269 PYCARD-AS1I3L0S3 204 aa9.81□□□□□ -0.84
TCOF1-203ENST00000394269 CTDSPLO15194 276 aa9.81□□□□□ -0.84
TCOF1-203ENST00000394269 SULT1B1O43704 296 aa9.81□□□□□ -0.84
TCOF1-203ENST00000394269 LCATP04180 440 aa9.81□□□□□ -0.84
TCOF1-203ENST00000394269 BTG1P62324 171 aa9.81□□□□□ -0.84
TCOF1-203ENST00000394269 SRSF6Q13247 344 aaKnown RBP9.81□□□□□ -0.84
TCOF1-203ENST00000394269 CEACAM16Q2WEN9 425 aa9.81□□□□□ -0.84
TCOF1-203ENST00000394269 ZNF528Q3MIS6 628 aa9.81□□□□□ -0.84
TCOF1-203ENST00000394269 HACD4Q5VWC8 232 aa9.81□□□□□ -0.84
TCOF1-203ENST00000394269 OR2V1Q8NHB1 315 aa9.81□□□□□ -0.84
TCOF1-203ENST00000394269 FBXO17Q96EF6 278 aa9.81□□□□□ -0.84
TCOF1-203ENST00000394269 CMTM3Q96MX0 182 aa9.81□□□□□ -0.84
TCOF1-203ENST00000394269 DDA1Q9BW61 102 aa9.81□□□□□ -0.84
TCOF1-203ENST00000394269 GHITMQ9H3K2 345 aa9.81□□□□□ -0.84
TCOF1-203ENST00000394269 METTL17Q9H7H0 456 aaPredicted RBP9.81□□□□□ -0.84
TCOF1-203ENST00000394269 COPZ2Q9P299 210 aa9.81□□□□□ -0.84
TCOF1-203ENST00000394269 BOKQ9UMX3 212 aaPredicted RBP9.81□□□□□ -0.84
TCOF1-203ENST00000394269 ING4Q9UNL4 249 aa9.81□□□□□ -0.84
TCOF1-203ENST00000394269 H7C417 338 aa9.8□□□□□ -0.84
TCOF1-203ENST00000394269 NOS1APO75052 506 aaPredicted RBP9.8□□□□□ -0.84
TCOF1-203ENST00000394269 CRTAPO75718 401 aaPredicted RBP9.8□□□□□ -0.84
TCOF1-203ENST00000394269 SIX6O95475 246 aa9.8□□□□□ -0.84
TCOF1-203ENST00000394269 ISG15P05161 165 aa9.8□□□□□ -0.84
TCOF1-203ENST00000394269 ZNF24P17028 368 aa9.8□□□□□ -0.84
TCOF1-203ENST00000394269 OR3A4PP47883 348 aa9.8□□□□□ -0.84
TCOF1-203ENST00000394269 DLX5P56178 289 aa9.8□□□□□ -0.84
TCOF1-203ENST00000394269 C4orf46Q504U0 113 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms