RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 ZNF587Q96SQ5 575 aaPredicted RBP6.91□□□□□ -1.3
VTI1A-201ENST00000393077 TPSD1Q9BZJ3 242 aa6.91□□□□□ -1.3
VTI1A-201ENST00000393077 NPIPA1Q9UND3 350 aa6.91□□□□□ -1.3
VTI1A-201ENST00000393077 DENND4AQ7Z401 1863 aa6.91□□□□□ -1.3
VTI1A-201ENST00000393077 DOCK5Q9H7D0 1870 aa6.91□□□□□ -1.3
VTI1A-201ENST00000393077 ARFGEF1Q9Y6D6 1849 aa6.91□□□□□ -1.3
VTI1A-201ENST00000393077 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.91□□□□□ -1.3
VTI1A-201ENST00000393077 DCDC2BA2VCK2 349 aa6.91□□□□□ -1.3
VTI1A-201ENST00000393077 FITM1A5D6W6 292 aa6.91□□□□□ -1.3
VTI1A-201ENST00000393077 ZFP92A6NM28 416 aa6.91□□□□□ -1.3
VTI1A-201ENST00000393077 ADH1BP00325 375 aa6.91□□□□□ -1.3
VTI1A-201ENST00000393077 CD8AP01732 235 aa6.91□□□□□ -1.3
VTI1A-201ENST00000393077 STAG3L3P0CL85 134 aa6.91□□□□□ -1.3
VTI1A-201ENST00000393077 HINT1P49773 126 aaPredicted RBP6.91□□□□□ -1.3
VTI1A-201ENST00000393077 RIPPLY3P57055 190 aa6.91□□□□□ -1.3
VTI1A-201ENST00000393077 FZD5Q13467 585 aa6.91□□□□□ -1.3
VTI1A-201ENST00000393077 CDK5R1Q15078 307 aa6.91□□□□□ -1.3
VTI1A-201ENST00000393077 Q499Y3 187 aa6.91□□□□□ -1.3
VTI1A-201ENST00000393077 ENTPD8Q5MY95 495 aa6.91□□□□□ -1.3
VTI1A-201ENST00000393077 SLC25A30Q5SVS4 291 aa6.91□□□□□ -1.3
VTI1A-201ENST00000393077 PWWP2BQ6NUJ5 590 aa6.91□□□□□ -1.3
VTI1A-201ENST00000393077 LEG1Q6P5S2 330 aa6.91□□□□□ -1.3
VTI1A-201ENST00000393077 FAM58AQ8N1B3 248 aa6.91□□□□□ -1.3
VTI1A-201ENST00000393077 ZNF784Q8NCA9 323 aaPredicted RBP6.91□□□□□ -1.3
VTI1A-201ENST00000393077 OR4K14Q8NGD5 310 aa6.91□□□□□ -1.3
VTI1A-201ENST00000393077 OR13C8Q8NGS7 320 aa6.91□□□□□ -1.3
VTI1A-201ENST00000393077 ELL3Q9HB65 397 aaPredicted RBP6.91□□□□□ -1.3
VTI1A-201ENST00000393077 MRPS18AQ9NVS2 196 aaKnown RBP6.91□□□□□ -1.3
VTI1A-201ENST00000393077 OSER1Q9NX31 292 aa6.91□□□□□ -1.3
VTI1A-201ENST00000393077 AK3Q9UIJ7 227 aa6.91□□□□□ -1.3
VTI1A-201ENST00000393077 VAX2Q9UIW0 290 aa6.91□□□□□ -1.3
VTI1A-201ENST00000393077 A0A1W2PNV4 684 aa6.9□□□□□ -1.3
VTI1A-201ENST00000393077 ZNF264O43296 627 aa6.9□□□□□ -1.3
VTI1A-201ENST00000393077 STC2O76061 302 aa6.9□□□□□ -1.3
VTI1A-201ENST00000393077 PPP1R3DO95685 299 aa6.9□□□□□ -1.3
VTI1A-201ENST00000393077 FCARP24071 287 aa6.9□□□□□ -1.3
VTI1A-201ENST00000393077 CTSSP25774 331 aa6.9□□□□□ -1.3
VTI1A-201ENST00000393077 SSR2P43308 183 aa6.9□□□□□ -1.3
VTI1A-201ENST00000393077 GPR3P46089 330 aa6.9□□□□□ -1.3
VTI1A-201ENST00000393077 PGFP49763 221 aa6.9□□□□□ -1.3
VTI1A-201ENST00000393077 NCBP2P52298 156 aaKnown RBP eCLIP6.9□□□□□ -1.3
VTI1A-201ENST00000393077 TAS2R38P59533 333 aa6.9□□□□□ -1.3
VTI1A-201ENST00000393077 AGTRAPQ6RW13 159 aa6.9□□□□□ -1.3
VTI1A-201ENST00000393077 CHST9Q7L1S5 443 aa6.9□□□□□ -1.3
VTI1A-201ENST00000393077 SLC36A1Q7Z2H8 476 aa6.9□□□□□ -1.3
VTI1A-201ENST00000393077 TRAPPC6BQ86SZ2 158 aa6.9□□□□□ -1.3
VTI1A-201ENST00000393077 UMODL1-AS1Q8N2C9 162 aa6.9□□□□□ -1.3
VTI1A-201ENST00000393077 C17orf78Q8N4C9 275 aa6.9□□□□□ -1.3
VTI1A-201ENST00000393077 OR2T27Q8NH04 317 aa6.9□□□□□ -1.3
VTI1A-201ENST00000393077 Q8WTZ3 238 aa6.9□□□□□ -1.3
VTI1A-201ENST00000393077 FAM46BQ96A09 425 aa6.9□□□□□ -1.3
VTI1A-201ENST00000393077 TMEM106AQ96A25 262 aa6.9□□□□□ -1.3
VTI1A-201ENST00000393077 MIEN1Q9BRT3 115 aa6.9□□□□□ -1.3
VTI1A-201ENST00000393077 ACTR3CQ9C0K3 210 aaPredicted RBP6.9□□□□□ -1.3
VTI1A-201ENST00000393077 TWSG1Q9GZX9 223 aa6.9□□□□□ -1.3
VTI1A-201ENST00000393077 SIRT4Q9Y6E7 314 aaPredicted RBP6.9□□□□□ -1.3
VTI1A-201ENST00000393077 WNT6Q9Y6F9 365 aa6.9□□□□□ -1.3
VTI1A-201ENST00000393077 MIA3Q5JRA6 1907 aa6.9□□□□□ -1.3
VTI1A-201ENST00000393077 TNS1Q9HBL0 1735 aaKnown RBP6.9□□□□□ -1.3
VTI1A-201ENST00000393077 A0A0U1RQK1 487 aa6.9□□□□□ -1.31
VTI1A-201ENST00000393077 RBFOX3A6NFN3 312 aa6.9□□□□□ -1.31
VTI1A-201ENST00000393077 TNFSF12O43508 249 aa6.9□□□□□ -1.31
VTI1A-201ENST00000393077 EIF4E2O60573 245 aaKnown RBP6.9□□□□□ -1.31
VTI1A-201ENST00000393077 WDR1O75083 606 aa6.9□□□□□ -1.31
VTI1A-201ENST00000393077 LCATP04180 440 aa6.9□□□□□ -1.31
VTI1A-201ENST00000393077 CLEC3BP05452 202 aa6.9□□□□□ -1.31
VTI1A-201ENST00000393077 AMY2BP19961 511 aa6.9□□□□□ -1.31
VTI1A-201ENST00000393077 THBS2P35442 1172 aa6.9□□□□□ -1.31
VTI1A-201ENST00000393077 RAB32Q13637 225 aa6.9□□□□□ -1.31
VTI1A-201ENST00000393077 C10orf91Q5T1B1 145 aa6.9□□□□□ -1.31
VTI1A-201ENST00000393077 GRASPQ7Z6J2 395 aaPredicted RBP6.9□□□□□ -1.31
VTI1A-201ENST00000393077 NR2C2APQ86WQ0 139 aa6.9□□□□□ -1.31
VTI1A-201ENST00000393077 MMP21Q8N119 569 aa6.9□□□□□ -1.31
VTI1A-201ENST00000393077 SIGLECL1Q8N7X8 197 aa6.9□□□□□ -1.31
VTI1A-201ENST00000393077 OR5H2Q8NGV7 314 aa6.9□□□□□ -1.31
VTI1A-201ENST00000393077 STT3BQ8TCJ2 826 aa6.9□□□□□ -1.31
VTI1A-201ENST00000393077 FAM3DQ96BQ1 224 aa6.9□□□□□ -1.31
VTI1A-201ENST00000393077 NTNG2Q96CW9 530 aa6.9□□□□□ -1.31
VTI1A-201ENST00000393077 C2orf50Q96LR7 162 aa6.9□□□□□ -1.31
VTI1A-201ENST00000393077 EFCAB11Q9BUY7 163 aa6.9□□□□□ -1.31
VTI1A-201ENST00000393077 BOCQ9BWV1 1114 aa6.9□□□□□ -1.31
VTI1A-201ENST00000393077 FBXL17Q9UF56 701 aa6.9□□□□□ -1.31
VTI1A-201ENST00000393077 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.9□□□□□ -1.31
VTI1A-201ENST00000393077 A0A1W2PN81 502 aa6.9□□□□□ -1.31
VTI1A-201ENST00000393077 EFSO43281 561 aa6.9□□□□□ -1.31
VTI1A-201ENST00000393077 ZNF749O43361 778 aa6.9□□□□□ -1.31
VTI1A-201ENST00000393077 PRAMEF11O60813 436 aa6.9□□□□□ -1.31
VTI1A-201ENST00000393077 IFNA5P01569 189 aa6.9□□□□□ -1.31
VTI1A-201ENST00000393077 C1SP09871 688 aa6.9□□□□□ -1.31
VTI1A-201ENST00000393077 OR2T7P0C7T2 308 aa6.9□□□□□ -1.31
VTI1A-201ENST00000393077 MPZP25189 248 aa6.9□□□□□ -1.31
VTI1A-201ENST00000393077 CHRNA7P36544 502 aa6.9□□□□□ -1.31
VTI1A-201ENST00000393077 EGR3Q06889 387 aa6.9□□□□□ -1.31
VTI1A-201ENST00000393077 CHRFAM7AQ494W8 412 aa6.9□□□□□ -1.31
VTI1A-201ENST00000393077 OR8G2PQ6IF36 304 aa6.9□□□□□ -1.31
VTI1A-201ENST00000393077 ZNF880Q6PDB4 577 aa6.9□□□□□ -1.31
VTI1A-201ENST00000393077 DPY19L4Q7Z388 723 aa6.9□□□□□ -1.31
VTI1A-201ENST00000393077 CATSPERDQ86XM0 798 aa6.9□□□□□ -1.31
VTI1A-201ENST00000393077 CMTM1Q8IZ96 169 aa6.9□□□□□ -1.31
VTI1A-201ENST00000393077 TCTEX1D1Q8N7M0 179 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms