RNA–Protein interactions for RNA: ENST00000381835.9

CIITA-202, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 1 (best) BASIC

Gene CIITA, Length 2,344 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-202ENST00000381835 CLRN1P58418 232 aa10.99□□□□□ -0.65
CIITA-202ENST00000381835 SEZ6L2Q6UXD5 910 aa10.99□□□□□ -0.65
CIITA-202ENST00000381835 ABHD3Q8WU67 409 aa10.99□□□□□ -0.65
CIITA-202ENST00000381835 ORAI1Q96D31 301 aa10.99□□□□□ -0.65
CIITA-202ENST00000381835 SEC22CQ9BRL7 303 aa10.99□□□□□ -0.65
CIITA-202ENST00000381835 SLC25A18Q9H1K4 315 aa10.99□□□□□ -0.65
CIITA-202ENST00000381835 NPDC1Q9NQX5 325 aaPredicted RBP10.99□□□□□ -0.65
CIITA-202ENST00000381835 ZNF69Q9UC07 566 aa10.99□□□□□ -0.65
CIITA-202ENST00000381835 KIF25Q9UIL4 384 aa10.99□□□□□ -0.65
CIITA-202ENST00000381835 LHX6Q9UPM6 363 aa10.99□□□□□ -0.65
CIITA-202ENST00000381835 L7N2F9 121 aa10.98□□□□□ -0.65
CIITA-202ENST00000381835 PDCD5O14737 125 aa10.98□□□□□ -0.65
CIITA-202ENST00000381835 SYNGR4O95473 234 aa10.98□□□□□ -0.65
CIITA-202ENST00000381835 IGHG1P01857 330 aa10.98□□□□□ -0.65
CIITA-202ENST00000381835 IGHG3P01860 377 aa10.98□□□□□ -0.65
CIITA-202ENST00000381835 HLA-DQA2P01906 255 aa10.98□□□□□ -0.65
CIITA-202ENST00000381835 RAD52P43351 418 aa10.98□□□□□ -0.65
CIITA-202ENST00000381835 OTPQ5XKR4 325 aa10.98□□□□□ -0.65
CIITA-202ENST00000381835 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.98□□□□□ -0.65
CIITA-202ENST00000381835 POMGNT2Q8NAT1 580 aa10.98□□□□□ -0.65
CIITA-202ENST00000381835 OR6X1Q8NH79 312 aa10.98□□□□□ -0.65
CIITA-202ENST00000381835 WDYHV1Q96HA8 205 aa10.98□□□□□ -0.65
CIITA-202ENST00000381835 PRRG4Q9BZD6 226 aa10.98□□□□□ -0.65
CIITA-202ENST00000381835 NOX3Q9HBY0 568 aa10.98□□□□□ -0.65
CIITA-202ENST00000381835 KLK11Q9UBX7 282 aa10.98□□□□□ -0.65
CIITA-202ENST00000381835 TLN1Q9Y490 2541 aaKnown RBP10.98□□□□□ -0.65
CIITA-202ENST00000381835 TPRP12270 2363 aaKnown RBP10.98□□□□□ -0.65
CIITA-202ENST00000381835 IGKV1D-43A0A0B4J1Z2 117 aa10.98□□□□□ -0.65
CIITA-202ENST00000381835 TUBAL3A6NHL2 446 aa10.98□□□□□ -0.65
CIITA-202ENST00000381835 IFITM5A6NNB3 132 aa10.98□□□□□ -0.65
CIITA-202ENST00000381835 PGA4P0DJD7 388 aa10.98□□□□□ -0.65
CIITA-202ENST00000381835 PGA3P0DJD8 388 aa10.98□□□□□ -0.65
CIITA-202ENST00000381835 CRABP1P29762 137 aa10.98□□□□□ -0.65
CIITA-202ENST00000381835 PSMA6P60900 246 aaKnown RBP10.98□□□□□ -0.65
CIITA-202ENST00000381835 RASGEF1BQ0VAM2 473 aa10.98□□□□□ -0.65
CIITA-202ENST00000381835 GGTLC2Q14390 218 aa10.98□□□□□ -0.65
CIITA-202ENST00000381835 ELFN2Q5R3F8 820 aa10.98□□□□□ -0.65
CIITA-202ENST00000381835 ABLIM2Q6H8Q1 611 aa10.98□□□□□ -0.65
CIITA-202ENST00000381835 GLDNQ6ZMI3 551 aaPredicted RBP10.98□□□□□ -0.65
CIITA-202ENST00000381835 C3P1Q6ZMU1 363 aa10.98□□□□□ -0.65
CIITA-202ENST00000381835 NOXO1Q8NFA2 376 aa10.98□□□□□ -0.65
CIITA-202ENST00000381835 FNDC9Q8TBE3 224 aa10.98□□□□□ -0.65
CIITA-202ENST00000381835 NSMAFQ92636 917 aa10.98□□□□□ -0.65
CIITA-202ENST00000381835 ELMOD3Q96FG2 381 aa10.98□□□□□ -0.65
CIITA-202ENST00000381835 S100A16Q96FQ6 103 aaKnown RBP10.98□□□□□ -0.65
CIITA-202ENST00000381835 SF3B5Q9BWJ5 86 aaKnown RBP10.98□□□□□ -0.65
CIITA-202ENST00000381835 MRPL13Q9BYD1 178 aaKnown RBP10.98□□□□□ -0.65
CIITA-202ENST00000381835 MCTS1Q9ULC4 181 aaKnown RBP10.98□□□□□ -0.65
CIITA-202ENST00000381835 COA3Q9Y2R0 106 aaPredicted RBP10.98□□□□□ -0.65
CIITA-202ENST00000381835 FREM1Q5H8C1 2179 aa10.98□□□□□ -0.65
CIITA-202ENST00000381835 IGLV1-36A0A0B4J1U3 117 aa10.97□□□□□ -0.65
CIITA-202ENST00000381835 hCG_1807616A0A1W2PRN6 198 aa10.97□□□□□ -0.65
CIITA-202ENST00000381835 ACOD1A6NK06 481 aa10.97□□□□□ -0.65
CIITA-202ENST00000381835 ZNF716A6NP11 495 aa10.97□□□□□ -0.65
CIITA-202ENST00000381835 FAM25EA8MYX2 175 aa10.97□□□□□ -0.65
CIITA-202ENST00000381835 AIPO00170 330 aa10.97□□□□□ -0.65
CIITA-202ENST00000381835 CYTIPO60759 359 aa10.97□□□□□ -0.65
CIITA-202ENST00000381835 CD1AP06126 327 aa10.97□□□□□ -0.65
CIITA-202ENST00000381835 RPS27P42677 84 aaKnown RBP10.97□□□□□ -0.65
CIITA-202ENST00000381835 UNQ9370/PRO34162Q6UXP9 181 aa10.97□□□□□ -0.65
CIITA-202ENST00000381835 ZIC4Q8N9L1 334 aa10.97□□□□□ -0.65
CIITA-202ENST00000381835 SLC25A38Q96DW6 304 aa10.97□□□□□ -0.65
CIITA-202ENST00000381835 GFI1Q99684 422 aa10.97□□□□□ -0.65
CIITA-202ENST00000381835 PPA2Q9H2U2 334 aa10.97□□□□□ -0.65
CIITA-202ENST00000381835 WDR76Q9H967 626 aa10.97□□□□□ -0.65
CIITA-202ENST00000381835 LIN7BQ9HAP6 207 aa10.97□□□□□ -0.65
CIITA-202ENST00000381835 CA10Q9NS85 328 aa10.97□□□□□ -0.65
CIITA-202ENST00000381835 FLVCR1Q9Y5Y0 555 aa10.97□□□□□ -0.65
CIITA-202ENST00000381835 PLSCR5A0PG75 271 aa10.97□□□□□ -0.65
CIITA-202ENST00000381835 ANKRD61A6NGH8 418 aa10.97□□□□□ -0.65
CIITA-202ENST00000381835 TSPAN4O14817 238 aa10.97□□□□□ -0.65
CIITA-202ENST00000381835 PIN1P1O15428 100 aa10.97□□□□□ -0.65
CIITA-202ENST00000381835 CREBL2O60519 120 aaPredicted RBP10.97□□□□□ -0.65
CIITA-202ENST00000381835 AQP8O94778 261 aa10.97□□□□□ -0.65
CIITA-202ENST00000381835 ACSM4P0C7M7 580 aa10.97□□□□□ -0.65
CIITA-202ENST00000381835 CPN1P15169 458 aa10.97□□□□□ -0.65
CIITA-202ENST00000381835 ATF4P18848 351 aaPredicted RBP10.97□□□□□ -0.65
CIITA-202ENST00000381835 CXCL2P19875 107 aa10.97□□□□□ -0.65
CIITA-202ENST00000381835 NFYAP23511 347 aaPredicted RBP10.97□□□□□ -0.65
CIITA-202ENST00000381835 CLDN12P56749 244 aa10.97□□□□□ -0.65
CIITA-202ENST00000381835 NHLRC3Q5JS37 347 aa10.97□□□□□ -0.65
CIITA-202ENST00000381835 TMEM69Q5SWH9 247 aa10.97□□□□□ -0.65
CIITA-202ENST00000381835 DNM1P34Q6PK57 102 aa10.97□□□□□ -0.65
CIITA-202ENST00000381835 SPICQ8N5J4 248 aa10.97□□□□□ -0.65
CIITA-202ENST00000381835 PHYHIPQ92561 330 aa10.97□□□□□ -0.65
CIITA-202ENST00000381835 MRPL48Q96GC5 212 aaKnown RBP10.97□□□□□ -0.65
CIITA-202ENST00000381835 ADAD1Q96M93 576 aaKnown RBP10.97□□□□□ -0.65
CIITA-202ENST00000381835 GPN1Q9HCN4 374 aaPredicted RBP10.97□□□□□ -0.65
CIITA-202ENST00000381835 PIPOXQ9P0Z9 390 aa10.97□□□□□ -0.65
CIITA-202ENST00000381835 COPS3Q9UNS2 423 aa10.97□□□□□ -0.65
CIITA-202ENST00000381835 MED12LQ86YW9 2145 aa10.97□□□□□ -0.65
CIITA-202ENST00000381835 A0A1B0GTH9 108 aa10.96□□□□□ -0.65
CIITA-202ENST00000381835 GPRIN2O60269 458 aa10.96□□□□□ -0.65
CIITA-202ENST00000381835 GIPP09681 153 aaPredicted RBP10.96□□□□□ -0.65
CIITA-202ENST00000381835 ANXA7P20073 488 aaKnown RBP10.96□□□□□ -0.65
CIITA-202ENST00000381835 GLO1Q04760 184 aa10.96□□□□□ -0.65
CIITA-202ENST00000381835 BAMBIQ13145 260 aa10.96□□□□□ -0.65
CIITA-202ENST00000381835 THEM4Q5T1C6 240 aa10.96□□□□□ -0.65
CIITA-202ENST00000381835 FAAP20Q6NZ36 180 aa10.96□□□□□ -0.65
CIITA-202ENST00000381835 OR6N1Q8NGY5 312 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms